RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 RAB9BQ9NP90 201 aa5.13□□□□□ -1.59
ATPAF1-209ENST00000529214 EXOSC4Q9NPD3 245 aaKnown RBP5.13□□□□□ -1.59
ATPAF1-209ENST00000529214 ST3GAL6Q9Y274 331 aa5.13□□□□□ -1.59
ATPAF1-209ENST00000529214 MRPS28Q9Y2Q9 187 aaKnown RBP5.13□□□□□ -1.59
ATPAF1-209ENST00000529214 CUBNO60494 3623 aa5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 TGIF2-C20orf24A0A0A6YYL0 155 aa5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 TRAV1-2A0A0B4J238 106 aa5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 A0A0U1RRA0 63 aa5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 CENPVL3A0A0U1RRI6 287 aa5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 A0A1W2PP11 408 aa5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 CGB1A6NKQ9 187 aa5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 NPIPB11E5RHQ5 1161 aa5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 SIRPB1O00241 398 aa5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 MGST3O14880 152 aa5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 GEMIN2O14893 280 aaKnown RBP5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 CTDSPLO15194 276 aa5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 PDE6DO43924 150 aa5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 CSN2P05814 226 aa5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 IL6RP08887 468 aaPredicted RBP5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 MXD1Q05195 221 aa5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 UBE2V1Q13404 147 aa5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 KIAA0141Q14154 515 aaPredicted RBP5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 PIGYQ3MUY2 71 aa5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 AWAT2Q6E213 333 aa5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 LYG1Q8N1E2 194 aa5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 SVBPQ8N300 66 aa5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 KIR3DL3Q8N743 410 aa5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 Q8N7P7 452 aa5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 OR51S1Q8NGJ8 323 aa5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 SLC25A28Q96A46 364 aa5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 TBX15Q96SF7 602 aa5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 GFI1Q99684 422 aa5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 DPCDQ9BVM2 203 aaPredicted RBP5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 SSBP4Q9BWG4 385 aaPredicted RBP5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 CHST6Q9GZX3 395 aa5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 TXNL4BQ9NX01 149 aaKnown RBP5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 GAR1Q9NY12 217 aaKnown RBP5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 AK6Q9Y3D8 172 aaKnown RBP5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 CSDC2Q9Y534 153 aaKnown RBP5.12□□□□□ -1.59
ATPAF1-209ENST00000529214 NSD1Q96L73 2696 aaPredicted RBP5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 NF1P21359 2839 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 TRAV24A0A0B4J272 114 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 C17orf98A8MV24 154 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 M0R1W7 72 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 GPR31O00270 319 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 ARPC1BO15143 372 aaKnown RBP5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 CCL25O15444 150 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 UBBP0CG47 229 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 IGHV4-38-2P0DP08 117 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 PRTN3P24158 256 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 HTR2CP28335 458 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 CDX1P47902 265 aaPredicted RBP5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 EDDM3BP56851 147 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 RBM11P57052 281 aaKnown RBP5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 MEF2CQ06413 473 aaPredicted RBP5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 OR5I1Q13606 314 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 CLINT1Q14677 625 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 MPV17LQ2QL34 196 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 COL5A1-AS1Q5SY13 56 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 C22orf42Q6IC83 251 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 SIGLEC15Q6ZMC9 328 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 VMO1Q7Z5L0 202 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 LINC00596Q86U02 117 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 SMIM20Q8N5G0 67 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 TPRX1Q8N7U7 411 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 SMIM8Q96KF7 97 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 SPAG8Q99932 426 aaPredicted RBP5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 C20orf85Q9H1P6 137 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 ABCG5Q9H222 651 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 OR51E2Q9H255 320 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 BANF2Q9H503 90 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 VPREB3Q9UKI3 123 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 UFC1Q9Y3C8 167 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 FAM96BQ9Y3D0 163 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 V9GY05 133 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 SONP18583 2426 aaKnown RBP5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 MXRA5Q9NR99 2828 aa5.11□□□□□ -1.59
ATPAF1-209ENST00000529214 WNK2Q9Y3S1 2297 aa5.1□□□□□ -1.59
ATPAF1-209ENST00000529214 TRAV40A0A0B4J280 105 aa5.1□□□□□ -1.59
ATPAF1-209ENST00000529214 hADV38S2A0JD32 116 aa5.1□□□□□ -1.59
ATPAF1-209ENST00000529214 FAM90A10PA6NDY2 464 aa5.1□□□□□ -1.59
ATPAF1-209ENST00000529214 TMEM14DPA8MWL7 114 aa5.1□□□□□ -1.59
ATPAF1-209ENST00000529214 M0QZ24 198 aa5.1□□□□□ -1.59
ATPAF1-209ENST00000529214 SLC17A2O00624 439 aa5.1□□□□□ -1.59
ATPAF1-209ENST00000529214 SNAPC5O75971 98 aa5.1□□□□□ -1.59
ATPAF1-209ENST00000529214 OR7C1O76099 320 aaPredicted RBP5.1□□□□□ -1.59
ATPAF1-209ENST00000529214 ZNF728P0DKX0 622 aa5.1□□□□□ -1.59
ATPAF1-209ENST00000529214 CGB3P0DN86 165 aa5.1□□□□□ -1.59
ATPAF1-209ENST00000529214 CGB7P0DN87 165 aa5.1□□□□□ -1.59
ATPAF1-209ENST00000529214 MGMTP16455 207 aa5.1□□□□□ -1.59
ATPAF1-209ENST00000529214 CCL3L1P16619 93 aa5.1□□□□□ -1.59
ATPAF1-209ENST00000529214 PMCHP20382 165 aa5.1□□□□□ -1.59
ATPAF1-209ENST00000529214 HOXA5P20719 270 aa5.1□□□□□ -1.59
ATPAF1-209ENST00000529214 F2RP25116 425 aa5.1□□□□□ -1.59
ATPAF1-209ENST00000529214 CFPP27918 469 aa5.1□□□□□ -1.59
ATPAF1-209ENST00000529214 GLIPR1P48060 266 aa5.1□□□□□ -1.59
ATPAF1-209ENST00000529214 PPT1P50897 306 aa5.1□□□□□ -1.59
ATPAF1-209ENST00000529214 DLX6P56179 175 aa5.1□□□□□ -1.59
ATPAF1-209ENST00000529214 OR2B8PP59922 312 aa5.1□□□□□ -1.59
ATPAF1-209ENST00000529214 QRFPP83859 136 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 310.2 ms