RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 IL6RP08887 468 aaPredicted RBP14.4□□□□□ -0.1
USH1C-205ENST00000527020 HSPE1P61604 102 aaKnown RBP14.4□□□□□ -0.1
USH1C-205ENST00000527020 ARSJQ5FYB0 599 aaPredicted RBP14.4□□□□□ -0.1
USH1C-205ENST00000527020 MIC13Q5XKP0 118 aa14.4□□□□□ -0.1
USH1C-205ENST00000527020 SLC25A48Q6ZT89 311 aaKnown RBP14.4□□□□□ -0.1
USH1C-205ENST00000527020 WFDC8Q8IUA0 241 aa14.4□□□□□ -0.1
USH1C-205ENST00000527020 ADTRPQ96IZ2 230 aa14.4□□□□□ -0.1
USH1C-205ENST00000527020 TP53TG5Q9Y2B4 290 aa14.4□□□□□ -0.1
USH1C-205ENST00000527020 ADGRG4Q8IZF6 3080 aa14.4□□□□□ -0.1
USH1C-205ENST00000527020 C11orf94C9JXX5 98 aa14.4□□□□□ -0.1
USH1C-205ENST00000527020 PFN1P07737 140 aaKnown RBP14.4□□□□□ -0.1
USH1C-205ENST00000527020 CT45A6P0DMU7 189 aa14.4□□□□□ -0.1
USH1C-205ENST00000527020 CT45A5P0DMU8 189 aa14.4□□□□□ -0.1
USH1C-205ENST00000527020 CT45A7P0DMV0 189 aa14.4□□□□□ -0.1
USH1C-205ENST00000527020 CISD2Q8N5K1 135 aaKnown RBP14.4□□□□□ -0.1
USH1C-205ENST00000527020 FRZBQ92765 325 aa14.4□□□□□ -0.1
USH1C-205ENST00000527020 PXMP4Q9Y6I8 212 aa14.4□□□□□ -0.1
USH1C-205ENST00000527020 MUC6Q6W4X9 2439 aa14.39□□□□□ -0.11
USH1C-205ENST00000527020 PIEZO2Q9H5I5 2752 aa14.39□□□□□ -0.11
USH1C-205ENST00000527020 PRRG2O14669 202 aa14.39□□□□□ -0.11
USH1C-205ENST00000527020 SOX15O60248 233 aa14.39□□□□□ -0.11
USH1C-205ENST00000527020 IRF2P14316 349 aa14.39□□□□□ -0.11
USH1C-205ENST00000527020 CDX1P47902 265 aaPredicted RBP14.39□□□□□ -0.11
USH1C-205ENST00000527020 S100A12P80511 92 aa14.39□□□□□ -0.11
USH1C-205ENST00000527020 ELOVL5Q9NYP7 299 aa14.39□□□□□ -0.11
USH1C-205ENST00000527020 ROS1P08922 2347 aa14.39□□□□□ -0.11
USH1C-205ENST00000527020 C17orf100A8MU93 164 aa14.39□□□□□ -0.11
USH1C-205ENST00000527020 OR4A8P0C604 315 aa14.39□□□□□ -0.11
USH1C-205ENST00000527020 ATP5G3P48201 142 aa14.39□□□□□ -0.11
USH1C-205ENST00000527020 SLC24A4Q8NFF2 622 aa14.39□□□□□ -0.11
USH1C-205ENST00000527020 PYGO2Q9BRQ0 406 aa14.39□□□□□ -0.11
USH1C-205ENST00000527020 JKAMPQ9P055 326 aa14.39□□□□□ -0.11
USH1C-205ENST00000527020 DCHS1Q96JQ0 3298 aa14.38□□□□□ -0.11
USH1C-205ENST00000527020 TMPRSS2O15393 492 aa14.38□□□□□ -0.11
USH1C-205ENST00000527020 IGKV1-16P04430 117 aa14.38□□□□□ -0.11
USH1C-205ENST00000527020 TRGC1P0CF51 173 aa14.38□□□□□ -0.11
USH1C-205ENST00000527020 NPY1RP25929 384 aa14.38□□□□□ -0.11
USH1C-205ENST00000527020 BSPH1Q075Z2 132 aa14.38□□□□□ -0.11
USH1C-205ENST00000527020 OR51G1Q8NGK1 321 aa14.38□□□□□ -0.11
USH1C-205ENST00000527020 APC2O95996 2303 aa14.38□□□□□ -0.11
USH1C-205ENST00000527020 A0A1W2PPV4 95 aa14.37□□□□□ -0.11
USH1C-205ENST00000527020 SRRM4A7MD48 611 aaKnown RBP14.37□□□□□ -0.11
USH1C-205ENST00000527020 CA2P00918 260 aa14.37□□□□□ -0.11
USH1C-205ENST00000527020 UBE2G2P60604 165 aa14.37□□□□□ -0.11
USH1C-205ENST00000527020 GNB1P62873 340 aa14.37□□□□□ -0.11
USH1C-205ENST00000527020 TMEM30BQ3MIR4 351 aa14.37□□□□□ -0.11
USH1C-205ENST00000527020 NPVFQ9HCQ7 196 aa14.37□□□□□ -0.11
USH1C-205ENST00000527020 LINC00312Q9Y6C7 94 aa14.37□□□□□ -0.11
USH1C-205ENST00000527020 HRASP01112 189 aa14.37□□□□□ -0.11
USH1C-205ENST00000527020 STAG3L2P0CL84 134 aa14.37□□□□□ -0.11
USH1C-205ENST00000527020 STAG3L3P0CL85 134 aa14.37□□□□□ -0.11
USH1C-205ENST00000527020 ARL14EPLP0DKL9 152 aa14.37□□□□□ -0.11
USH1C-205ENST00000527020 NDUFB7P17568 137 aa14.37□□□□□ -0.11
USH1C-205ENST00000527020 TNFRSF1AP19438 455 aa14.37□□□□□ -0.11
USH1C-205ENST00000527020 COL8A2P25067 703 aa14.37□□□□□ -0.11
USH1C-205ENST00000527020 NECAP1Q8NC96 275 aa14.37□□□□□ -0.11
USH1C-205ENST00000527020 SSMEM1Q8WWF3 244 aa14.37□□□□□ -0.11
USH1C-205ENST00000527020 NIT2Q9NQR4 276 aa14.37□□□□□ -0.11
USH1C-205ENST00000527020 SH3BGRL2Q9UJC5 107 aa14.37□□□□□ -0.11
USH1C-205ENST00000527020 SSUH2Q9Y2M2 353 aa14.37□□□□□ -0.11
USH1C-205ENST00000527020 OR51B2Q9Y5P1 312 aa14.37□□□□□ -0.11
USH1C-205ENST00000527020 hADV38S2A0JD32 116 aa14.36□□□□□ -0.11
USH1C-205ENST00000527020 GFI1BQ5VTD9 330 aa14.36□□□□□ -0.11
USH1C-205ENST00000527020 ELOVL1Q9BW60 279 aa14.36□□□□□ -0.11
USH1C-205ENST00000527020 SLC25A10Q9UBX3 287 aaPredicted RBP14.36□□□□□ -0.11
USH1C-205ENST00000527020 UPK2O00526 184 aa14.36□□□□□ -0.11
USH1C-205ENST00000527020 TGOLN2O43493 480 aa14.36□□□□□ -0.11
USH1C-205ENST00000527020 VENTXO95231 258 aa14.36□□□□□ -0.11
USH1C-205ENST00000527020 SLC35D1Q9NTN3 355 aa14.36□□□□□ -0.11
USH1C-205ENST00000527020 NKX6-3A6NJ46 265 aa14.35□□□□□ -0.11
USH1C-205ENST00000527020 H7BYZ3 331 aa14.35□□□□□ -0.11
USH1C-205ENST00000527020 SPTBN2O15020 2390 aa14.35□□□□□ -0.11
USH1C-205ENST00000527020 PDE6DO43924 150 aa14.35□□□□□ -0.11
USH1C-205ENST00000527020 SOD3P08294 240 aa14.35□□□□□ -0.11
USH1C-205ENST00000527020 CTAG1AP78358 180 aa14.35□□□□□ -0.11
USH1C-205ENST00000527020 ZNF833PQ6ZTB9 187 aa14.35□□□□□ -0.11
USH1C-205ENST00000527020 DERL1Q9BUN8 251 aa14.35□□□□□ -0.11
USH1C-205ENST00000527020 GSN-AS1Q9NRJ2 163 aa14.35□□□□□ -0.11
USH1C-205ENST00000527020 KCNIP2Q9NS61 270 aa14.35□□□□□ -0.11
USH1C-205ENST00000527020 ZNF835Q9Y2P0 537 aa14.35□□□□□ -0.11
USH1C-205ENST00000527020 CCL3L1P16619 93 aa14.34□□□□□ -0.11
USH1C-205ENST00000527020 GALR1P47211 349 aa14.34□□□□□ -0.11
USH1C-205ENST00000527020 B2MP61769 119 aa14.34□□□□□ -0.11
USH1C-205ENST00000527020 C4orf17Q53FE4 359 aa14.34□□□□□ -0.11
USH1C-205ENST00000527020 CST9LP1Q5W188 147 aa14.34□□□□□ -0.11
USH1C-205ENST00000527020 TEPPQ6URK8 271 aa14.34□□□□□ -0.11
USH1C-205ENST00000527020 GFRALQ6UXV0 394 aa14.34□□□□□ -0.11
USH1C-205ENST00000527020 OR10A7Q8NGE5 316 aa14.34□□□□□ -0.11
USH1C-205ENST00000527020 NEUROG1Q92886 237 aa14.34□□□□□ -0.11
USH1C-205ENST00000527020 HINT2Q9BX68 163 aa14.34□□□□□ -0.11
USH1C-205ENST00000527020 ENY2Q9NPA8 101 aa14.34□□□□□ -0.11
USH1C-205ENST00000527020 PRNDQ9UKY0 176 aa14.34□□□□□ -0.11
USH1C-205ENST00000527020 ZNF257Q9Y2Q1 563 aa14.34□□□□□ -0.11
USH1C-205ENST00000527020 PRCDQ00LT1 54 aa14.34□□□□□ -0.11
USH1C-205ENST00000527020 SPATA31B1PQ5VZV4 182 aa14.34□□□□□ -0.11
USH1C-205ENST00000527020 HIST3H2BBQ8N257 126 aa14.34□□□□□ -0.11
USH1C-205ENST00000527020 STPG3Q8N7X2 389 aa14.34□□□□□ -0.11
USH1C-205ENST00000527020 RND1Q92730 232 aa14.34□□□□□ -0.11
USH1C-205ENST00000527020 SRD5A3Q9H8P0 318 aa14.34□□□□□ -0.11
USH1C-205ENST00000527020 TMEM178BH3BS89 294 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms