RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 NDUFA7O95182 113 aa10.82□□□□□ -0.68
CD44-224ENST00000526669 HKR1P10072 659 aa10.82□□□□□ -0.68
CD44-224ENST00000526669 HLA-GP17693 338 aa10.82□□□□□ -0.68
CD44-224ENST00000526669 RPL27AP46776 148 aaKnown RBP10.82□□□□□ -0.68
CD44-224ENST00000526669 TATDN3Q17R31 274 aa10.82□□□□□ -0.68
CD44-224ENST00000526669 SPINK9Q5DT21 86 aa10.82□□□□□ -0.68
CD44-224ENST00000526669 LRTM2Q8N967 370 aa10.82□□□□□ -0.68
CD44-224ENST00000526669 OR2T6Q8NHC8 308 aa10.82□□□□□ -0.68
CD44-224ENST00000526669 CHPT1Q8WUD6 406 aa10.82□□□□□ -0.68
CD44-224ENST00000526669 MITD1Q8WV92 249 aa10.82□□□□□ -0.68
CD44-224ENST00000526669 SRSF12Q8WXF0 261 aaKnown RBP10.82□□□□□ -0.68
CD44-224ENST00000526669 LSM10Q969L4 123 aaKnown RBP10.82□□□□□ -0.68
CD44-224ENST00000526669 FYTTD1Q96QD9 318 aaKnown RBP10.82□□□□□ -0.68
CD44-224ENST00000526669 HINT2Q9BX68 163 aa10.82□□□□□ -0.68
CD44-224ENST00000526669 QTRT1Q9BXR0 403 aaKnown RBP10.82□□□□□ -0.68
CD44-224ENST00000526669 CACNG5Q9UF02 275 aa10.82□□□□□ -0.68
CD44-224ENST00000526669 WSB1Q9Y6I7 421 aa10.82□□□□□ -0.68
CD44-224ENST00000526669 WNK1Q9H4A3 2382 aa10.81□□□□□ -0.68
CD44-224ENST00000526669 HMX3A6NHT5 357 aa10.81□□□□□ -0.68
CD44-224ENST00000526669 MPTX1A8MV57 137 aa10.81□□□□□ -0.68
CD44-224ENST00000526669 E7EUB6 86 aa10.81□□□□□ -0.68
CD44-224ENST00000526669 KCNAB3O43448 404 aa10.81□□□□□ -0.68
CD44-224ENST00000526669 VDAC1P21796 283 aa10.81□□□□□ -0.68
CD44-224ENST00000526669 COMPP49747 757 aaPredicted RBP10.81□□□□□ -0.68
CD44-224ENST00000526669 C2orf68Q2NKX9 166 aa10.81□□□□□ -0.68
CD44-224ENST00000526669 NMSQ5H8A3 153 aa10.81□□□□□ -0.68
CD44-224ENST00000526669 ZNF562Q6V9R5 426 aa10.81□□□□□ -0.68
CD44-224ENST00000526669 Q8N2B8 174 aa10.81□□□□□ -0.68
CD44-224ENST00000526669 OR4F5Q8NH21 305 aa10.81□□□□□ -0.68
CD44-224ENST00000526669 LINC01006Q8NI28 216 aa10.81□□□□□ -0.68
CD44-224ENST00000526669 C19orf24Q9BVV8 132 aa10.81□□□□□ -0.68
CD44-224ENST00000526669 C16orf95Q9H693 158 aa10.81□□□□□ -0.68
CD44-224ENST00000526669 SERTAD4Q9NUC0 356 aa10.81□□□□□ -0.68
CD44-224ENST00000526669 OR51B2Q9Y5P1 312 aa10.81□□□□□ -0.68
CD44-224ENST00000526669 TEX50A0A1B0GTY4 177 aa10.8□□□□□ -0.68
CD44-224ENST00000526669 A0A1B0GW64 132 aa10.8□□□□□ -0.68
CD44-224ENST00000526669 DUXBA0A1W2PPF3 345 aa10.8□□□□□ -0.68
CD44-224ENST00000526669 FAM25EA8MYX2 175 aa10.8□□□□□ -0.68
CD44-224ENST00000526669 G3V318 75 aa10.8□□□□□ -0.68
CD44-224ENST00000526669 HAX1O00165 279 aa10.8□□□□□ -0.68
CD44-224ENST00000526669 ST8SIA3O43173 380 aa10.8□□□□□ -0.68
CD44-224ENST00000526669 SULT1A3P0DMM9 295 aa10.8□□□□□ -0.68
CD44-224ENST00000526669 SULT1A4P0DMN0 295 aa10.8□□□□□ -0.68
CD44-224ENST00000526669 EGR2P11161 476 aaPredicted RBP10.8□□□□□ -0.68
CD44-224ENST00000526669 MAS1LP35410 378 aa10.8□□□□□ -0.68
CD44-224ENST00000526669 HIST2H2BDQ6DRA6 164 aa10.8□□□□□ -0.68
CD44-224ENST00000526669 UNQ5815/PRO19632Q6UWF5 114 aa10.8□□□□□ -0.68
CD44-224ENST00000526669 C10orf99Q6UWK7 81 aa10.8□□□□□ -0.68
CD44-224ENST00000526669 FAM219AQ8IW50 185 aa10.8□□□□□ -0.68
CD44-224ENST00000526669 FOXRED2Q8IWF2 684 aa10.8□□□□□ -0.68
CD44-224ENST00000526669 LFNGQ8NES3 379 aa10.8□□□□□ -0.68
CD44-224ENST00000526669 COMMD5Q9GZQ3 224 aa10.8□□□□□ -0.68
CD44-224ENST00000526669 PRNDQ9UKY0 176 aa10.8□□□□□ -0.68
CD44-224ENST00000526669 FBN1P35555 2871 aaKnown RBP10.8□□□□□ -0.68
CD44-224ENST00000526669 COL6A5A8TX70 2615 aa10.79□□□□□ -0.68
CD44-224ENST00000526669 MSGN1A6NI15 193 aa10.79□□□□□ -0.68
CD44-224ENST00000526669 CGB1A6NKQ9 187 aa10.79□□□□□ -0.68
CD44-224ENST00000526669 SNRPGP15A8MWD9 76 aa10.79□□□□□ -0.68
CD44-224ENST00000526669 AP4M1O00189 453 aa10.79□□□□□ -0.68
CD44-224ENST00000526669 SSNA1O43805 119 aa10.79□□□□□ -0.68
CD44-224ENST00000526669 IFNA21P01568 189 aa10.79□□□□□ -0.68
CD44-224ENST00000526669 REG1AP05451 166 aa10.79□□□□□ -0.68
CD44-224ENST00000526669 SMCO1Q147U7 214 aa10.79□□□□□ -0.68
CD44-224ENST00000526669 THOC7Q6I9Y2 204 aaKnown RBP10.79□□□□□ -0.68
CD44-224ENST00000526669 STPG2Q8N412 459 aa10.79□□□□□ -0.68
CD44-224ENST00000526669 KLHDC1Q8N7A1 406 aa10.79□□□□□ -0.68
CD44-224ENST00000526669 MINDY2Q8NBR6 621 aa10.79□□□□□ -0.68
CD44-224ENST00000526669 OR10W1Q8NGF6 305 aa10.79□□□□□ -0.68
CD44-224ENST00000526669 OR1L8Q8NGR8 309 aa10.79□□□□□ -0.68
CD44-224ENST00000526669 OR1S1Q8NH92 325 aa10.79□□□□□ -0.68
CD44-224ENST00000526669 SGMS2Q8NHU3 365 aa10.79□□□□□ -0.68
CD44-224ENST00000526669 TMEM14BQ9NUH8 114 aa10.79□□□□□ -0.68
CD44-224ENST00000526669 FOXA2Q9Y261 457 aaPredicted RBP10.79□□□□□ -0.68
CD44-224ENST00000526669 TMED3Q9Y3Q3 217 aa10.79□□□□□ -0.68
CD44-224ENST00000526669 RNF114Q9Y508 228 aa10.79□□□□□ -0.68
CD44-224ENST00000526669 TENM1Q9UKZ4 2725 aa10.78□□□□□ -0.68
CD44-224ENST00000526669 TRAV41A0A0B4J266 112 aa10.78□□□□□ -0.68
CD44-224ENST00000526669 C13orf42A0A1B0GVH6 325 aa10.78□□□□□ -0.68
CD44-224ENST00000526669 A0A1W2PN81 502 aa10.78□□□□□ -0.68
CD44-224ENST00000526669 CLPSL1A2RUU4 121 aa10.78□□□□□ -0.68
CD44-224ENST00000526669 C7orf66A4D0T2 115 aa10.78□□□□□ -0.68
CD44-224ENST00000526669 TEX22C9J3V5 150 aa10.78□□□□□ -0.68
CD44-224ENST00000526669 GOSR2O14653 212 aa10.78□□□□□ -0.68
CD44-224ENST00000526669 SIX6O95475 246 aa10.78□□□□□ -0.68
CD44-224ENST00000526669 IFNA17P01571 189 aa10.78□□□□□ -0.68
CD44-224ENST00000526669 TRAPPC2P0DI81 140 aa10.78□□□□□ -0.68
CD44-224ENST00000526669 TRAPPC2BP0DI82 140 aa10.78□□□□□ -0.68
CD44-224ENST00000526669 CHRNA7P36544 502 aa10.78□□□□□ -0.68
CD44-224ENST00000526669 ASPHD1Q5U4P2 390 aa10.78□□□□□ -0.68
CD44-224ENST00000526669 C11orf87Q6NUJ2 197 aa10.78□□□□□ -0.68
CD44-224ENST00000526669 C19orf35Q6ZS72 473 aa10.78□□□□□ -0.68
CD44-224ENST00000526669 ZNF329Q86UD4 541 aa10.78□□□□□ -0.68
CD44-224ENST00000526669 CADM3Q8N126 398 aa10.78□□□□□ -0.68
CD44-224ENST00000526669 OR10C1Q96KK4 312 aa10.78□□□□□ -0.68
CD44-224ENST00000526669 PDCD10Q9BUL8 212 aa10.78□□□□□ -0.68
CD44-224ENST00000526669 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.78□□□□□ -0.68
CD44-224ENST00000526669 A0A1B0GU03 582 aa10.77□□□□□ -0.69
CD44-224ENST00000526669 TMEM89A2RUT3 159 aa10.77□□□□□ -0.69
CD44-224ENST00000526669 PSMB11A5LHX3 300 aa10.77□□□□□ -0.69
CD44-224ENST00000526669 C5orf51A6NDU8 294 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms