RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 ZNF107Q9UII5 783 aaPredicted RBP4.03□□□□□ -1.76
SVIP-202ENST00000525670 MGAT4AQ9UM21 535 aa4.03□□□□□ -1.76
SVIP-202ENST00000525670 WASHC3Q9Y3C0 194 aa4.03□□□□□ -1.76
SVIP-202ENST00000525670 FBXO7Q9Y3I1 522 aa4.03□□□□□ -1.76
SVIP-202ENST00000525670 MEGF8Q7Z7M0 2845 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 IGLV5-52A0A0A0MRZ9 124 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 IGHV4-28A0A0C4DH34 117 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 LINC00854A0A1B0GVQ3 168 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 TCRBV4S1A1TA0A5B7 111 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 PSMB11A5LHX3 300 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 SULT1C2O00338 296 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 FCN1O00602 326 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 DIRAS3O95661 229 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 PPYP01298 95 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 HLA-DQB1P01920 261 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 APOA1P02647 267 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 PRB2P02812 416 aaPredicted RBP4.02□□□□□ -1.77
SVIP-202ENST00000525670 OPN1MWP04001 364 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 CSF1P09603 554 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 OPN1MW2P0DN77 364 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 OPN1MW3P0DN78 364 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 MYOD1P15172 320 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 PGAM2P15259 253 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 CD1BP29016 333 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 RANBP1P43487 201 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 ZNF137PP52743 207 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 PITPNAQ00169 270 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 PJVKQ0ZLH3 352 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 CDK10Q15131 360 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 SCGB2B2Q4G0G5 96 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 TCTEX1D4Q5JR98 221 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 AADACL3Q5VUY0 350 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 TMEM268Q5VZI3 342 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 C11orf88Q6PI97 169 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 ZNF818PQ6ZRF7 136 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 ZNF554Q86TJ5 538 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 HOGA1Q86XE5 327 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 ZNF645Q8N7E2 425 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 C8orf31Q8N9H6 132 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 KLHL30-AS1Q8NEE0 82 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 OR5AU1Q8NGC0 362 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 ACOT12Q8WYK0 555 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 DIRAS2Q96HU8 199 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 CITED1Q99966 193 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 ABCG5Q9H222 651 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.02□□□□□ -1.77
SVIP-202ENST00000525670 PLSCR3Q9NRY6 295 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 NECAP2Q9NVZ3 263 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 KLK11Q9UBX7 282 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 RSL24D1Q9UHA3 163 aaKnown RBP4.02□□□□□ -1.77
SVIP-202ENST00000525670 OR2W1Q9Y3N9 320 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 MMP24Q9Y5R2 645 aa4.02□□□□□ -1.77
SVIP-202ENST00000525670 PRKDCP78527 4128 aaKnown RBP4.02□□□□□ -1.77
SVIP-202ENST00000525670 A0A0A6YYH2 397 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 IGHV7-81A0A0B4J1V7 117 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 A0A0B4J293 547 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 A0A1B0GUS0 222 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 A0A1W2PN81 502 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 OR5H14A6NHG9 310 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 A6NJ64 397 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 NPIPB5A8MRT5 1133 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 M0QZ24 198 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 RAMP3O60896 148 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 S1PR2O95136 353 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 IGHV3-11P01762 117 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 PRH1P02810 166 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 CD3DP04234 171 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 SAA1P0DJI8 122 aaPredicted RBP4.01□□□□□ -1.77
SVIP-202ENST00000525670 VDAC1P21796 283 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 DUTP33316 252 aaKnown RBP4.01□□□□□ -1.77
SVIP-202ENST00000525670 RCVRNP35243 200 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 CHRNA7P36544 502 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 TMBIM6P55061 237 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 OR2B8PP59922 312 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 TSPAN5P62079 268 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 CBX3Q13185 183 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 ARL6IP1Q15041 203 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 PSG5Q15238 335 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 TNXAQ16473 311 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 RTL8BQ17RB0 113 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 C5orf64Q2M2E5 130 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 C2orf68Q2NKX9 166 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 PYDC2Q56P42 97 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 FOXRED2Q8IWF2 684 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 STPG2Q8N412 459 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 FAM71E2Q8N5Q1 922 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 NEXN-AS1Q8NBZ9 246 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 OR5AP2Q8NGF4 316 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 OR4X2Q8NGF9 303 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 GPX8Q8TED1 209 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 C2CD4CQ8TF44 421 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 MS4A10Q96PG2 267 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 ABHD1Q96SE0 405 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 PHB2Q99623 299 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 SLIRPQ9GZT3 109 aaKnown RBP4.01□□□□□ -1.77
SVIP-202ENST00000525670 ALX4Q9H161 411 aaPredicted RBP4.01□□□□□ -1.77
SVIP-202ENST00000525670 ZNF355PQ9NSJ1 428 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 RBMX2Q9Y388 322 aaKnown RBP4.01□□□□□ -1.77
SVIP-202ENST00000525670 NOTCH3Q9UM47 2321 aa4.01□□□□□ -1.77
SVIP-202ENST00000525670 SRRM4A7MD48 611 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 498 ms