RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 SAP25Q8TEE9 199 aa10.7□□□□□ -0.7
TRAPPC9-208ENST00000520857 SH2D2AQ9NP31 389 aa10.7□□□□□ -0.7
TRAPPC9-208ENST00000520857 COL5A1P20908 1838 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC9-208ENST00000520857 DPRXA6NFQ7 191 aa10.7□□□□□ -0.7
TRAPPC9-208ENST00000520857 FOXH1O75593 365 aa10.7□□□□□ -0.7
TRAPPC9-208ENST00000520857 LHX2P50458 406 aa10.7□□□□□ -0.7
TRAPPC9-208ENST00000520857 STUMQ69YW2 141 aa10.7□□□□□ -0.7
TRAPPC9-208ENST00000520857 STPG3Q8N7X2 389 aa10.7□□□□□ -0.7
TRAPPC9-208ENST00000520857 OR2M7Q8NG81 312 aa10.7□□□□□ -0.7
TRAPPC9-208ENST00000520857 FAM173AQ9BQD7 235 aa10.7□□□□□ -0.7
TRAPPC9-208ENST00000520857 ZFP30Q9Y2G7 519 aa10.7□□□□□ -0.7
TRAPPC9-208ENST00000520857 CA1P00915 261 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC9-208ENST00000520857 IL6RP08887 468 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC9-208ENST00000520857 USF1P22415 310 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC9-208ENST00000520857 TEPPQ6URK8 271 aa10.69□□□□□ -0.7
TRAPPC9-208ENST00000520857 UNQ5815/PRO19632Q6UWF5 114 aa10.69□□□□□ -0.7
TRAPPC9-208ENST00000520857 PPP1R32Q7Z5V6 425 aa10.69□□□□□ -0.7
TRAPPC9-208ENST00000520857 OR13A1Q8NGR1 328 aa10.69□□□□□ -0.7
TRAPPC9-208ENST00000520857 EAF1Q96JC9 268 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC9-208ENST00000520857 NPVFQ9HCQ7 196 aa10.69□□□□□ -0.7
TRAPPC9-208ENST00000520857 BET1LQ9NYM9 111 aa10.69□□□□□ -0.7
TRAPPC9-208ENST00000520857 NPIPB11E5RHQ5 1161 aa10.69□□□□□ -0.7
TRAPPC9-208ENST00000520857 STAG3L2P0CL84 134 aa10.69□□□□□ -0.7
TRAPPC9-208ENST00000520857 STAG3L3P0CL85 134 aa10.69□□□□□ -0.7
TRAPPC9-208ENST00000520857 YPEL3P61236 119 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC9-208ENST00000520857 ASPHD1Q5U4P2 390 aa10.69□□□□□ -0.7
TRAPPC9-208ENST00000520857 WDR73Q6P4I2 378 aa10.69□□□□□ -0.7
TRAPPC9-208ENST00000520857 LEAP2Q969E1 77 aa10.69□□□□□ -0.7
TRAPPC9-208ENST00000520857 TMEM45BQ96B21 275 aa10.69□□□□□ -0.7
TRAPPC9-208ENST00000520857 GGTLC1Q9BX51 225 aa10.69□□□□□ -0.7
TRAPPC9-208ENST00000520857 CBY3A6NI87 242 aa10.69□□□□□ -0.7
TRAPPC9-208ENST00000520857 MPDU1O75352 247 aa10.69□□□□□ -0.7
TRAPPC9-208ENST00000520857 Q0VFX4 171 aa10.69□□□□□ -0.7
TRAPPC9-208ENST00000520857 WDR86Q86TI4 376 aa10.69□□□□□ -0.7
TRAPPC9-208ENST00000520857 STPG4Q8N801 248 aa10.69□□□□□ -0.7
TRAPPC9-208ENST00000520857 GMPPAQ96IJ6 420 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC9-208ENST00000520857 MGST2Q99735 147 aa10.69□□□□□ -0.7
TRAPPC9-208ENST00000520857 FRYLO94915 3013 aa10.68□□□□□ -0.7
TRAPPC9-208ENST00000520857 GPX1P07203 203 aa10.68□□□□□ -0.7
TRAPPC9-208ENST00000520857 GATA2P23769 480 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC9-208ENST00000520857 NPY1RP25929 384 aa10.68□□□□□ -0.7
TRAPPC9-208ENST00000520857 OPRK1P41145 380 aa10.68□□□□□ -0.7
TRAPPC9-208ENST00000520857 RPL39P5Q59GN2 51 aa10.68□□□□□ -0.7
TRAPPC9-208ENST00000520857 FAM122AQ96E09 287 aa10.68□□□□□ -0.7
TRAPPC9-208ENST00000520857 TXNDC17Q9BRA2 123 aa10.68□□□□□ -0.7
TRAPPC9-208ENST00000520857 LINC00470Q9BZP3 86 aa10.68□□□□□ -0.7
TRAPPC9-208ENST00000520857 DUSP13Q9UII6 198 aa10.68□□□□□ -0.7
TRAPPC9-208ENST00000520857 PMS2P5A8MQ11 134 aa10.68□□□□□ -0.7
TRAPPC9-208ENST00000520857 DUSP3P51452 185 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC9-208ENST00000520857 MIR17HGQ75NE6 70 aa10.68□□□□□ -0.7
TRAPPC9-208ENST00000520857 C1orf174Q8IYL3 243 aa10.68□□□□□ -0.7
TRAPPC9-208ENST00000520857 TRAV3A0A0B4J244 114 aa10.68□□□□□ -0.7
TRAPPC9-208ENST00000520857 APCSP02743 223 aa10.68□□□□□ -0.7
TRAPPC9-208ENST00000520857 GFRA1P56159 465 aa10.68□□□□□ -0.7
TRAPPC9-208ENST00000520857 NRN1LQ496H8 165 aa10.68□□□□□ -0.7
TRAPPC9-208ENST00000520857 ST6GALNAC6Q969X2 333 aa10.68□□□□□ -0.7
TRAPPC9-208ENST00000520857 VPS25Q9BRG1 176 aa10.68□□□□□ -0.7
TRAPPC9-208ENST00000520857 TP53TG3Q9ULZ0 132 aa10.68□□□□□ -0.7
TRAPPC9-208ENST00000520857 M0R2Z0 102 aa10.67□□□□□ -0.7
TRAPPC9-208ENST00000520857 MFAP2P55001 183 aa10.67□□□□□ -0.7
TRAPPC9-208ENST00000520857 EFNB3Q15768 340 aa10.67□□□□□ -0.7
TRAPPC9-208ENST00000520857 LEMD1Q68G75 181 aa10.67□□□□□ -0.7
TRAPPC9-208ENST00000520857 MBNL3Q9NUK0 354 aaKnown RBP10.67□□□□□ -0.7
TRAPPC9-208ENST00000520857 TCF19Q9Y242 345 aa10.67□□□□□ -0.7
TRAPPC9-208ENST00000520857 ARL2-SNX15V9GYD0 113 aa10.67□□□□□ -0.7
TRAPPC9-208ENST00000520857 LOC102724200A0A096LPH7 203 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC9-208ENST00000520857 LNP1A1A4G5 178 aa10.67□□□□□ -0.7
TRAPPC9-208ENST00000520857 K7EN84 100 aa10.67□□□□□ -0.7
TRAPPC9-208ENST00000520857 IGFBP2P18065 325 aa10.67□□□□□ -0.7
TRAPPC9-208ENST00000520857 MRPS11P82912 194 aaKnown RBP10.67□□□□□ -0.7
TRAPPC9-208ENST00000520857 FOXF2Q12947 444 aa10.67□□□□□ -0.7
TRAPPC9-208ENST00000520857 GAGE1Q13065 139 aa10.67□□□□□ -0.7
TRAPPC9-208ENST00000520857 IBA57Q5T440 356 aaKnown RBP10.67□□□□□ -0.7
TRAPPC9-208ENST00000520857 CT55Q8WUE5 264 aa10.67□□□□□ -0.7
TRAPPC9-208ENST00000520857 RCHY1Q96PM5 261 aa10.67□□□□□ -0.7
TRAPPC9-208ENST00000520857 IL19Q9UHD0 177 aa10.67□□□□□ -0.7
TRAPPC9-208ENST00000520857 C3orf79P0CE67 100 aa10.66□□□□□ -0.7
TRAPPC9-208ENST00000520857 LGALS4P56470 323 aa10.66□□□□□ -0.7
TRAPPC9-208ENST00000520857 COTL1Q14019 142 aa10.66□□□□□ -0.7
TRAPPC9-208ENST00000520857 HES3Q5TGS1 186 aa10.66□□□□□ -0.7
TRAPPC9-208ENST00000520857 C6orf15Q6UXA7 325 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC9-208ENST00000520857 TMEM251Q8N6I4 163 aa10.66□□□□□ -0.7
TRAPPC9-208ENST00000520857 SLC24A4Q8NFF2 622 aa10.66□□□□□ -0.7
TRAPPC9-208ENST00000520857 C5orf30Q96GV9 206 aa10.66□□□□□ -0.7
TRAPPC9-208ENST00000520857 TMEM140Q9NV12 185 aa10.66□□□□□ -0.7
TRAPPC9-208ENST00000520857 METRNQ9UJH8 293 aa10.66□□□□□ -0.7
TRAPPC9-208ENST00000520857 FRYQ5TBA9 3013 aa10.66□□□□□ -0.7
TRAPPC9-208ENST00000520857 LY6G6EA0A0G2JKS1 128 aa10.66□□□□□ -0.7
TRAPPC9-208ENST00000520857 AGFG2O95081 481 aa10.66□□□□□ -0.7
TRAPPC9-208ENST00000520857 PSG7Q13046 419 aa10.66□□□□□ -0.7
TRAPPC9-208ENST00000520857 SMIM21Q3B7S5 101 aa10.66□□□□□ -0.7
TRAPPC9-208ENST00000520857 ZNF738Q8NE65 137 aa10.66□□□□□ -0.7
TRAPPC9-208ENST00000520857 TTTY12Q9BZ98 90 aa10.66□□□□□ -0.7
TRAPPC9-208ENST00000520857 SLC45A2Q9UMX9 530 aa10.66□□□□□ -0.7
TRAPPC9-208ENST00000520857 MRPS18CQ9Y3D5 142 aaKnown RBP10.66□□□□□ -0.7
TRAPPC9-208ENST00000520857 U3KQA8 63 aa10.66□□□□□ -0.7
TRAPPC9-208ENST00000520857 MT-ND6P03923 174 aa10.66□□□□□ -0.7
TRAPPC9-208ENST00000520857 CYC1P08574 325 aa10.66□□□□□ -0.7
TRAPPC9-208ENST00000520857 CLDN18P56856 261 aa10.66□□□□□ -0.7
TRAPPC9-208ENST00000520857 TRAT1Q6PIZ9 186 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms