RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 OR1S2Q8NGQ3 325 aa6.87□□□□□ -1.31
VAPB-206ENST00000520497 CFHR4Q92496 578 aa6.87□□□□□ -1.31
VAPB-206ENST00000520497 RPEQ96AT9 228 aa6.87□□□□□ -1.31
VAPB-206ENST00000520497 FLYWCH2Q96CP2 140 aaKnown RBP6.87□□□□□ -1.31
VAPB-206ENST00000520497 SMIM8Q96KF7 97 aa6.87□□□□□ -1.31
VAPB-206ENST00000520497 TSNAXQ99598 290 aaKnown RBP6.87□□□□□ -1.31
VAPB-206ENST00000520497 KRTAP4-6Q9BYQ5 205 aa6.87□□□□□ -1.31
VAPB-206ENST00000520497 MAGT1Q9H0U3 335 aa6.87□□□□□ -1.31
VAPB-206ENST00000520497 HIPK2Q9H2X6 1198 aa6.87□□□□□ -1.31
VAPB-206ENST00000520497 C7orf69Q9H7B7 122 aa6.87□□□□□ -1.31
VAPB-206ENST00000520497 TMEM140Q9NV12 185 aa6.87□□□□□ -1.31
VAPB-206ENST00000520497 PSENENQ9NZ42 101 aa6.87□□□□□ -1.31
VAPB-206ENST00000520497 HSPB7Q9UBY9 170 aa6.87□□□□□ -1.31
VAPB-206ENST00000520497 PRNDQ9UKY0 176 aa6.87□□□□□ -1.31
VAPB-206ENST00000520497 MXRA5Q9NR99 2828 aa6.86□□□□□ -1.31
VAPB-206ENST00000520497 IGHV1-69DA0A0B4J2H0 117 aa6.86□□□□□ -1.31
VAPB-206ENST00000520497 A0A1W2PRD5 423 aa6.86□□□□□ -1.31
VAPB-206ENST00000520497 A0A1W2PRF3 423 aa6.86□□□□□ -1.31
VAPB-206ENST00000520497 A0A1W2PRM7 423 aa6.86□□□□□ -1.31
VAPB-206ENST00000520497 NPFFO15130 113 aa6.86□□□□□ -1.31
VAPB-206ENST00000520497 CHST1O43916 411 aa6.86□□□□□ -1.31
VAPB-206ENST00000520497 FSHBP01225 129 aa6.86□□□□□ -1.31
VAPB-206ENST00000520497 IGHV1-69P01742 117 aa6.86□□□□□ -1.31
VAPB-206ENST00000520497 FGF2P09038 288 aa6.86□□□□□ -1.31
VAPB-206ENST00000520497 IGHV4-38-2P0DP08 117 aa6.86□□□□□ -1.31
VAPB-206ENST00000520497 LGALS4P56470 323 aa6.86□□□□□ -1.31
VAPB-206ENST00000520497 SPCS3P61009 180 aa6.86□□□□□ -1.31
VAPB-206ENST00000520497 UBE2KP61086 200 aa6.86□□□□□ -1.31
VAPB-206ENST00000520497 KLF17Q5JT82 389 aaPredicted RBP6.86□□□□□ -1.31
VAPB-206ENST00000520497 CCDC144NLQ6NUI1 221 aa6.86□□□□□ -1.31
VAPB-206ENST00000520497 SLC25A24Q6NUK1 477 aa6.86□□□□□ -1.31
VAPB-206ENST00000520497 Q6ZRM9 215 aa6.86□□□□□ -1.31
VAPB-206ENST00000520497 BAP18Q8IXM2 172 aa6.86□□□□□ -1.31
VAPB-206ENST00000520497 OR52E5Q8NH55 327 aa6.86□□□□□ -1.31
VAPB-206ENST00000520497 OR4A5Q8NH83 315 aa6.86□□□□□ -1.31
VAPB-206ENST00000520497 C17orf50Q8WW18 174 aa6.86□□□□□ -1.31
VAPB-206ENST00000520497 MALSU1Q96EH3 234 aa6.86□□□□□ -1.31
VAPB-206ENST00000520497 RHOVQ96L33 236 aa6.86□□□□□ -1.31
VAPB-206ENST00000520497 SLC25A32Q9H2D1 315 aa6.86□□□□□ -1.31
VAPB-206ENST00000520497 FBXL17Q9UF56 701 aa6.86□□□□□ -1.31
VAPB-206ENST00000520497 STRAPQ9Y3F4 350 aaKnown RBP6.86□□□□□ -1.31
VAPB-206ENST00000520497 HILPDAQ9Y5L2 63 aa6.86□□□□□ -1.31
VAPB-206ENST00000520497 MSGN1A6NI15 193 aa6.85□□□□□ -1.31
VAPB-206ENST00000520497 SRRM4A7MD48 611 aaKnown RBP6.85□□□□□ -1.31
VAPB-206ENST00000520497 TIMM23O14925 209 aa6.85□□□□□ -1.31
VAPB-206ENST00000520497 NXPH3O95157 252 aa6.85□□□□□ -1.31
VAPB-206ENST00000520497 VENTXO95231 258 aa6.85□□□□□ -1.31
VAPB-206ENST00000520497 IFNA5P01569 189 aa6.85□□□□□ -1.31
VAPB-206ENST00000520497 IL6RP08887 468 aaPredicted RBP6.85□□□□□ -1.31
VAPB-206ENST00000520497 CD1BP29016 333 aa6.85□□□□□ -1.31
VAPB-206ENST00000520497 LGALS7P47929 136 aa6.85□□□□□ -1.31
VAPB-206ENST00000520497 HOXA1P49639 335 aaPredicted RBP6.85□□□□□ -1.31
VAPB-206ENST00000520497 SULT1A1P50225 295 aa6.85□□□□□ -1.31
VAPB-206ENST00000520497 RPS16P62249 146 aaKnown RBP6.85□□□□□ -1.31
VAPB-206ENST00000520497 KRTAP1-1Q07627 177 aa6.85□□□□□ -1.31
VAPB-206ENST00000520497 SSX2Q16385 188 aa6.85□□□□□ -1.31
VAPB-206ENST00000520497 IZUMO4Q1ZYL8 232 aa6.85□□□□□ -1.31
VAPB-206ENST00000520497 AARDQ4LEZ3 155 aa6.85□□□□□ -1.31
VAPB-206ENST00000520497 CLLU1Q5K131 121 aa6.85□□□□□ -1.31
VAPB-206ENST00000520497 CYB5R2Q6BCY4 276 aa6.85□□□□□ -1.31
VAPB-206ENST00000520497 OR4A47Q6IF82 309 aa6.85□□□□□ -1.31
VAPB-206ENST00000520497 SSX9Q7RTT3 188 aa6.85□□□□□ -1.31
VAPB-206ENST00000520497 MOB3BQ86TA1 216 aa6.85□□□□□ -1.31
VAPB-206ENST00000520497 ZNF429Q86V71 674 aa6.85□□□□□ -1.31
VAPB-206ENST00000520497 LILRB2Q8N423 598 aa6.85□□□□□ -1.31
VAPB-206ENST00000520497 TMEM252Q8N6L7 170 aa6.85□□□□□ -1.31
VAPB-206ENST00000520497 UBAC2Q8NBM4 344 aa6.85□□□□□ -1.31
VAPB-206ENST00000520497 DTD1Q8TEA8 209 aa6.85□□□□□ -1.31
VAPB-206ENST00000520497 RBMXL1Q96E39 390 aaKnown RBP6.85□□□□□ -1.31
VAPB-206ENST00000520497 HARBI1Q96MB7 349 aa6.85□□□□□ -1.31
VAPB-206ENST00000520497 RBKSQ9H477 322 aa6.85□□□□□ -1.31
VAPB-206ENST00000520497 BET1LQ9NYM9 111 aa6.85□□□□□ -1.31
VAPB-206ENST00000520497 PFDN2Q9UHV9 154 aa6.85□□□□□ -1.31
VAPB-206ENST00000520497 ZNF257Q9Y2Q1 563 aa6.85□□□□□ -1.31
VAPB-206ENST00000520497 HIVEP2P31629 2446 aa6.84□□□□□ -1.31
VAPB-206ENST00000520497 IGHV3-72A0A0B4J1Y9 119 aa6.84□□□□□ -1.31
VAPB-206ENST00000520497 FAM24AA6NFZ4 105 aa6.84□□□□□ -1.31
VAPB-206ENST00000520497 C15orf61A6NNL5 157 aa6.84□□□□□ -1.31
VAPB-206ENST00000520497 IGLV2-23P01705 113 aa6.84□□□□□ -1.31
VAPB-206ENST00000520497 OR9G9P0C7N8 305 aa6.84□□□□□ -1.31
VAPB-206ENST00000520497 SAA1P0DJI8 122 aaPredicted RBP6.84□□□□□ -1.31
VAPB-206ENST00000520497 IAPPP10997 89 aa6.84□□□□□ -1.31
VAPB-206ENST00000520497 PAX6P26367 422 aa6.84□□□□□ -1.31
VAPB-206ENST00000520497 F2RL1P55085 397 aa6.84□□□□□ -1.31
VAPB-206ENST00000520497 ATP5IP56385 69 aaPredicted RBP6.84□□□□□ -1.31
VAPB-206ENST00000520497 OR2B8PP59922 312 aa6.84□□□□□ -1.31
VAPB-206ENST00000520497 RAB11AP62491 216 aa6.84□□□□□ -1.31
VAPB-206ENST00000520497 RELBQ01201 579 aa6.84□□□□□ -1.31
VAPB-206ENST00000520497 EBI3Q14213 229 aa6.84□□□□□ -1.31
VAPB-206ENST00000520497 ATP6V1FQ16864 119 aa6.84□□□□□ -1.31
VAPB-206ENST00000520497 SPANXN5Q5MJ07 72 aa6.84□□□□□ -1.31
VAPB-206ENST00000520497 RUSC1-AS1Q66K80 236 aa6.84□□□□□ -1.31
VAPB-206ENST00000520497 ALKAL2Q6UX46 152 aa6.84□□□□□ -1.31
VAPB-206ENST00000520497 BRD3OSQ6XYD6 125 aa6.84□□□□□ -1.31
VAPB-206ENST00000520497 VKORC1L1Q8N0U8 176 aa6.84□□□□□ -1.31
VAPB-206ENST00000520497 PUSL1Q8N0Z8 303 aaKnown RBP6.84□□□□□ -1.31
VAPB-206ENST00000520497 SCGB1C1Q8TD33 95 aa6.84□□□□□ -1.31
VAPB-206ENST00000520497 RNF141Q8WVD5 230 aa6.84□□□□□ -1.31
VAPB-206ENST00000520497 PINX1Q96BK5 328 aaKnown RBP6.84□□□□□ -1.31
VAPB-206ENST00000520497 GNPNAT1Q96EK6 184 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms