RNA–Protein interactions for RNA: ENST00000518951.6

TOP1MT-206, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 5

Gene TOP1MT, Length 1,461 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-206ENST00000518951 HLA-GP17693 338 aa16.49■□□□□ 0.23
TOP1MT-206ENST00000518951 KRTAP21-3Q3LHN1 58 aa16.49■□□□□ 0.23
TOP1MT-206ENST00000518951 Q6ZRM9 215 aa16.49■□□□□ 0.23
TOP1MT-206ENST00000518951 KLHDC1Q8N7A1 406 aa16.49■□□□□ 0.23
TOP1MT-206ENST00000518951 ABHD5Q8WTS1 349 aa16.49■□□□□ 0.23
TOP1MT-206ENST00000518951 SRSF12Q8WXF0 261 aaKnown RBP16.49■□□□□ 0.23
TOP1MT-206ENST00000518951 CGB1A6NKQ9 187 aa16.48■□□□□ 0.23
TOP1MT-206ENST00000518951 CREBL2O60519 120 aaPredicted RBP16.48■□□□□ 0.23
TOP1MT-206ENST00000518951 CRIP2P52943 208 aaPredicted RBP16.48■□□□□ 0.23
TOP1MT-206ENST00000518951 OR2B8PP59922 312 aa16.48■□□□□ 0.23
TOP1MT-206ENST00000518951 C19orf54Q5BKX5 351 aa16.48■□□□□ 0.23
TOP1MT-206ENST00000518951 PLET1Q6UQ28 207 aa16.48■□□□□ 0.23
TOP1MT-206ENST00000518951 ZNF329Q86UD4 541 aa16.48■□□□□ 0.23
TOP1MT-206ENST00000518951 LRTM2Q8N967 370 aa16.48■□□□□ 0.23
TOP1MT-206ENST00000518951 LFNGQ8NES3 379 aa16.48■□□□□ 0.23
TOP1MT-206ENST00000518951 SGMS2Q8NHU3 365 aa16.48■□□□□ 0.23
TOP1MT-206ENST00000518951 GPR146Q96CH1 333 aa16.48■□□□□ 0.23
TOP1MT-206ENST00000518951 MARVELD1Q9BSK0 173 aa16.48■□□□□ 0.23
TOP1MT-206ENST00000518951 A0A0B4J293 547 aa16.48■□□□□ 0.23
TOP1MT-206ENST00000518951 MSGN1A6NI15 193 aa16.48■□□□□ 0.23
TOP1MT-206ENST00000518951 INMT-MINDY4F8WBC2 141 aa16.48■□□□□ 0.23
TOP1MT-206ENST00000518951 ACTL6BO94805 426 aa16.48■□□□□ 0.23
TOP1MT-206ENST00000518951 ATG12O94817 140 aa16.48■□□□□ 0.23
TOP1MT-206ENST00000518951 DUS4LO95620 317 aaKnown RBP16.48■□□□□ 0.23
TOP1MT-206ENST00000518951 PTTG1O95997 202 aa16.48■□□□□ 0.23
TOP1MT-206ENST00000518951 MAS1LP35410 378 aa16.48■□□□□ 0.23
TOP1MT-206ENST00000518951 SRSF4Q08170 494 aaKnown RBP16.48■□□□□ 0.23
TOP1MT-206ENST00000518951 ASPHD1Q5U4P2 390 aa16.48■□□□□ 0.23
TOP1MT-206ENST00000518951 CENPVQ7Z7K6 275 aaPredicted RBP16.48■□□□□ 0.23
TOP1MT-206ENST00000518951 RRNAD1Q96FB5 475 aaKnown RBP16.48■□□□□ 0.23
TOP1MT-206ENST00000518951 ZNF580Q9UK33 172 aa16.48■□□□□ 0.23
TOP1MT-206ENST00000518951 STAB1Q9NY15 2570 aa16.47■□□□□ 0.23
TOP1MT-206ENST00000518951 A0A0B4J2A0 478 aa16.47■□□□□ 0.23
TOP1MT-206ENST00000518951 SNAPC5O75971 98 aa16.47■□□□□ 0.23
TOP1MT-206ENST00000518951 APELAP0DMC3 54 aa16.47■□□□□ 0.23
TOP1MT-206ENST00000518951 RPL27AP46776 148 aaKnown RBP16.47■□□□□ 0.23
TOP1MT-206ENST00000518951 SRPXP78539 464 aa16.47■□□□□ 0.23
TOP1MT-206ENST00000518951 CFHR3Q02985 330 aa16.47■□□□□ 0.23
TOP1MT-206ENST00000518951 ECSCRQ19T08 205 aa16.47■□□□□ 0.23
TOP1MT-206ENST00000518951 HIST2H2BDQ6DRA6 164 aa16.47■□□□□ 0.23
TOP1MT-206ENST00000518951 RNASE11Q8TAA1 199 aaKnown RBP16.47■□□□□ 0.23
TOP1MT-206ENST00000518951 CHPT1Q8WUD6 406 aa16.47■□□□□ 0.23
TOP1MT-206ENST00000518951 WFDC12Q8WWY7 111 aa16.47■□□□□ 0.23
TOP1MT-206ENST00000518951 LSM10Q969L4 123 aaKnown RBP16.47■□□□□ 0.23
TOP1MT-206ENST00000518951 TMEM14BQ9NUH8 114 aa16.47■□□□□ 0.23
TOP1MT-206ENST00000518951 SHPKQ9UHJ6 478 aa16.47■□□□□ 0.23
TOP1MT-206ENST00000518951 TRAV41A0A0B4J266 112 aa16.46■□□□□ 0.23
TOP1MT-206ENST00000518951 TEX50A0A1B0GTY4 177 aa16.46■□□□□ 0.23
TOP1MT-206ENST00000518951 C15orf61A6NNL5 157 aa16.46■□□□□ 0.23
TOP1MT-206ENST00000518951 TEX22C9J3V5 150 aa16.46■□□□□ 0.23
TOP1MT-206ENST00000518951 PPIFP30405 207 aaKnown RBP16.46■□□□□ 0.23
TOP1MT-206ENST00000518951 NMSQ5H8A3 153 aa16.46■□□□□ 0.23
TOP1MT-206ENST00000518951 OR4A16Q8NH70 328 aa16.46■□□□□ 0.23
TOP1MT-206ENST00000518951 QTRT1Q9BXR0 403 aaKnown RBP16.46■□□□□ 0.23
TOP1MT-206ENST00000518951 HMX3A6NHT5 357 aa16.45■□□□□ 0.22
TOP1MT-206ENST00000518951 IL5P05113 134 aa16.45■□□□□ 0.22
TOP1MT-206ENST00000518951 FGF2P09038 288 aa16.45■□□□□ 0.22
TOP1MT-206ENST00000518951 VDAC1P21796 283 aa16.45■□□□□ 0.22
TOP1MT-206ENST00000518951 UNQ5815/PRO19632Q6UWF5 114 aa16.45■□□□□ 0.22
TOP1MT-206ENST00000518951 FAM219AQ8IW50 185 aa16.45■□□□□ 0.22
TOP1MT-206ENST00000518951 ZNF431Q8TF32 576 aaPredicted RBP16.45■□□□□ 0.22
TOP1MT-206ENST00000518951 MITD1Q8WV92 249 aa16.45■□□□□ 0.22
TOP1MT-206ENST00000518951 FYTTD1Q96QD9 318 aaKnown RBP16.45■□□□□ 0.22
TOP1MT-206ENST00000518951 COMMD5Q9GZQ3 224 aa16.45■□□□□ 0.22
TOP1MT-206ENST00000518951 PRNDQ9UKY0 176 aa16.45■□□□□ 0.22
TOP1MT-206ENST00000518951 OR51B2Q9Y5P1 312 aa16.45■□□□□ 0.22
TOP1MT-206ENST00000518951 PSMB11A5LHX3 300 aa16.44■□□□□ 0.22
TOP1MT-206ENST00000518951 SOX15O60248 233 aa16.44■□□□□ 0.22
TOP1MT-206ENST00000518951 HOXB5P09067 269 aa16.44■□□□□ 0.22
TOP1MT-206ENST00000518951 AKIRIN2Q53H80 203 aa16.44■□□□□ 0.22
TOP1MT-206ENST00000518951 MINDY2Q8NBR6 621 aa16.44■□□□□ 0.22
TOP1MT-206ENST00000518951 OR5AU1Q8NGC0 362 aa16.44■□□□□ 0.22
TOP1MT-206ENST00000518951 PHB2Q99623 299 aa16.44■□□□□ 0.22
TOP1MT-206ENST00000518951 FOXA2Q9Y261 457 aaPredicted RBP16.44■□□□□ 0.22
TOP1MT-206ENST00000518951 DUXBA0A1W2PPF3 345 aa16.43■□□□□ 0.22
TOP1MT-206ENST00000518951 ADAP1O75689 374 aa16.43■□□□□ 0.22
TOP1MT-206ENST00000518951 TCTEX1D4Q5JR98 221 aa16.43■□□□□ 0.22
TOP1MT-206ENST00000518951 C12orf54Q6X4T0 127 aa16.43■□□□□ 0.22
TOP1MT-206ENST00000518951 C11orf44Q8N8P7 122 aa16.43■□□□□ 0.22
TOP1MT-206ENST00000518951 OR10W1Q8NGF6 305 aa16.43■□□□□ 0.22
TOP1MT-206ENST00000518951 COQ8AQ8NI60 647 aa16.43■□□□□ 0.22
TOP1MT-206ENST00000518951 CACNG5Q9UF02 275 aa16.43■□□□□ 0.22
TOP1MT-206ENST00000518951 ST8SIA3O43173 380 aa16.42■□□□□ 0.22
TOP1MT-206ENST00000518951 CD28P10747 220 aa16.42■□□□□ 0.22
TOP1MT-206ENST00000518951 TMEM267Q0VDI3 215 aaPredicted RBP16.42■□□□□ 0.22
TOP1MT-206ENST00000518951 RGS21Q2M5E4 152 aa16.42■□□□□ 0.22
TOP1MT-206ENST00000518951 GGNBP1Q5YKI7 109 aa16.42■□□□□ 0.22
TOP1MT-206ENST00000518951 OR5T1Q8NG75 326 aa16.42■□□□□ 0.22
TOP1MT-206ENST00000518951 OR1L8Q8NGR8 309 aa16.42■□□□□ 0.22
TOP1MT-206ENST00000518951 SPIN2AQ99865 258 aa16.42■□□□□ 0.22
TOP1MT-206ENST00000518951 SPIN2BQ9BPZ2 258 aa16.42■□□□□ 0.22
TOP1MT-206ENST00000518951 NDUFA4L2Q9NRX3 87 aa16.42■□□□□ 0.22
TOP1MT-206ENST00000518951 FKBP11Q9NYL4 201 aa16.42■□□□□ 0.22
TOP1MT-206ENST00000518951 A0A1W2PN81 502 aa16.42■□□□□ 0.22
TOP1MT-206ENST00000518951 RBMXL2O75526 392 aaKnown RBP16.42■□□□□ 0.22
TOP1MT-206ENST00000518951 CHRNA7P36544 502 aa16.42■□□□□ 0.22
TOP1MT-206ENST00000518951 LCNL1Q6ZST4 164 aa16.42■□□□□ 0.22
TOP1MT-206ENST00000518951 ZNF429Q86V71 674 aa16.42■□□□□ 0.22
TOP1MT-206ENST00000518951 GON7Q9BXV9 100 aa16.42■□□□□ 0.22
TOP1MT-206ENST00000518951 TMED3Q9Y3Q3 217 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms