RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 GCHFRP30047 84 aa11.43□□□□□ -0.58
SH3TC1-225ENST00000515682 YPEL4Q96NS1 127 aa11.43□□□□□ -0.58
SH3TC1-225ENST00000515682 NEU1Q99519 415 aa11.43□□□□□ -0.58
SH3TC1-225ENST00000515682 PARD6GQ9BYG4 376 aaPredicted RBP11.43□□□□□ -0.58
SH3TC1-225ENST00000515682 LAMTOR2Q9Y2Q5 125 aa11.43□□□□□ -0.58
SH3TC1-225ENST00000515682 CGAP01215 116 aa11.42□□□□□ -0.58
SH3TC1-225ENST00000515682 S100A7P31151 101 aa11.42□□□□□ -0.58
SH3TC1-225ENST00000515682 PRR31Q5SQ13 230 aa11.42□□□□□ -0.58
SH3TC1-225ENST00000515682 IBA57Q5T440 356 aaKnown RBP11.42□□□□□ -0.58
SH3TC1-225ENST00000515682 ZBTB34Q8NCN2 500 aa11.42□□□□□ -0.58
SH3TC1-225ENST00000515682 NPVFQ9HCQ7 196 aa11.42□□□□□ -0.58
SH3TC1-225ENST00000515682 FREM1Q5H8C1 2179 aa11.42□□□□□ -0.58
SH3TC1-225ENST00000515682 AKAP6Q13023 2319 aa11.42□□□□□ -0.58
SH3TC1-225ENST00000515682 LTBP2Q14767 1821 aa11.42□□□□□ -0.58
SH3TC1-225ENST00000515682 PIEZO1Q92508 2521 aa11.42□□□□□ -0.58
SH3TC1-225ENST00000515682 ZNF716A6NP11 495 aa11.42□□□□□ -0.58
SH3TC1-225ENST00000515682 LRRC29Q8WV35 223 aa11.42□□□□□ -0.58
SH3TC1-225ENST00000515682 SGK494Q96LW2 274 aa11.42□□□□□ -0.58
SH3TC1-225ENST00000515682 AGMATQ9BSE5 352 aa11.42□□□□□ -0.58
SH3TC1-225ENST00000515682 RNASE7Q9H1E1 156 aaKnown RBP11.42□□□□□ -0.58
SH3TC1-225ENST00000515682 UNC80Q8N2C7 3258 aa11.42□□□□□ -0.58
SH3TC1-225ENST00000515682 RAB29O14966 203 aa11.42□□□□□ -0.58
SH3TC1-225ENST00000515682 COX7A2P2O60397 106 aa11.42□□□□□ -0.58
SH3TC1-225ENST00000515682 IGKV1-39P01597 117 aa11.42□□□□□ -0.58
SH3TC1-225ENST00000515682 IGKV1D-39P04432 117 aa11.42□□□□□ -0.58
SH3TC1-225ENST00000515682 ASCL4Q6XD76 172 aa11.42□□□□□ -0.58
SH3TC1-225ENST00000515682 OR2Z1Q8NG97 314 aa11.42□□□□□ -0.58
SH3TC1-225ENST00000515682 BLNKQ8WV28 456 aa11.42□□□□□ -0.58
SH3TC1-225ENST00000515682 ELOVL5Q9NYP7 299 aa11.42□□□□□ -0.58
SH3TC1-225ENST00000515682 IL19Q9UHD0 177 aa11.42□□□□□ -0.58
SH3TC1-225ENST00000515682 IGLV3-1P01715 115 aa11.41□□□□□ -0.58
SH3TC1-225ENST00000515682 CELA3AP09093 270 aa11.41□□□□□ -0.58
SH3TC1-225ENST00000515682 PCSK4Q6UW60 755 aa11.41□□□□□ -0.58
SH3TC1-225ENST00000515682 DCTN5Q9BTE1 182 aa11.41□□□□□ -0.58
SH3TC1-225ENST00000515682 TCTAP57738 103 aa11.41□□□□□ -0.58
SH3TC1-225ENST00000515682 MS4A5Q9H3V2 200 aa11.41□□□□□ -0.58
SH3TC1-225ENST00000515682 TMEM167BQ9NRX6 74 aa11.41□□□□□ -0.58
SH3TC1-225ENST00000515682 CRIM1Q9NZV1 1036 aa11.41□□□□□ -0.58
SH3TC1-225ENST00000515682 RPL30P62888 115 aaKnown RBP11.41□□□□□ -0.58
SH3TC1-225ENST00000515682 LEAP2Q969E1 77 aa11.41□□□□□ -0.58
SH3TC1-225ENST00000515682 GMPPAQ96IJ6 420 aaPredicted RBP11.41□□□□□ -0.58
SH3TC1-225ENST00000515682 INTS1Q8N201 2190 aaKnown RBP11.41□□□□□ -0.58
SH3TC1-225ENST00000515682 ZNF137PP52743 207 aa11.4□□□□□ -0.58
SH3TC1-225ENST00000515682 TDRG1Q3Y452 100 aa11.4□□□□□ -0.58
SH3TC1-225ENST00000515682 ZNF585BQ52M93 769 aa11.4□□□□□ -0.58
SH3TC1-225ENST00000515682 TMEM14EPQ6UXP3 125 aa11.4□□□□□ -0.58
SH3TC1-225ENST00000515682 ZNF114Q8NC26 417 aa11.4□□□□□ -0.58
SH3TC1-225ENST00000515682 C22orf15Q8WYQ4 148 aa11.4□□□□□ -0.58
SH3TC1-225ENST00000515682 COMMD5Q9GZQ3 224 aa11.4□□□□□ -0.58
SH3TC1-225ENST00000515682 DLL1O00548 723 aa11.4□□□□□ -0.58
SH3TC1-225ENST00000515682 NUPR1O60356 82 aa11.4□□□□□ -0.58
SH3TC1-225ENST00000515682 MT-ND6P03923 174 aa11.4□□□□□ -0.58
SH3TC1-225ENST00000515682 UNQ5815/PRO19632Q6UWF5 114 aa11.4□□□□□ -0.58
SH3TC1-225ENST00000515682 HEATR1Q9H583 2144 aaKnown RBP11.4□□□□□ -0.58
SH3TC1-225ENST00000515682 LOC102723996A0A087X1L8 192 aa11.4□□□□□ -0.58
SH3TC1-225ENST00000515682 NTF4P34130 210 aa11.4□□□□□ -0.58
SH3TC1-225ENST00000515682 TIMP3P35625 211 aa11.4□□□□□ -0.58
SH3TC1-225ENST00000515682 FAM53AQ6NSI3 398 aaPredicted RBP11.4□□□□□ -0.58
SH3TC1-225ENST00000515682 STPG3Q8N7X2 389 aa11.4□□□□□ -0.58
SH3TC1-225ENST00000515682 RAB9BQ9NP90 201 aa11.4□□□□□ -0.58
SH3TC1-225ENST00000515682 ZNF835Q9Y2P0 537 aa11.4□□□□□ -0.58
SH3TC1-225ENST00000515682 CDX4O14627 284 aaPredicted RBP11.4□□□□□ -0.59
SH3TC1-225ENST00000515682 MPDU1O75352 247 aa11.4□□□□□ -0.59
SH3TC1-225ENST00000515682 AGFG2O95081 481 aa11.4□□□□□ -0.59
SH3TC1-225ENST00000515682 LMO1P25800 156 aa11.4□□□□□ -0.59
SH3TC1-225ENST00000515682 POM121L2Q96KW2 1035 aa11.4□□□□□ -0.59
SH3TC1-225ENST00000515682 PKIBQ9C010 78 aa11.4□□□□□ -0.59
SH3TC1-225ENST00000515682 GNB4Q9HAV0 340 aa11.4□□□□□ -0.59
SH3TC1-225ENST00000515682 HSPB7Q9UBY9 170 aa11.4□□□□□ -0.59
SH3TC1-225ENST00000515682 FAM90A27PA6NNH2 459 aa11.39□□□□□ -0.59
SH3TC1-225ENST00000515682 FBXW9Q5XUX1 488 aa11.39□□□□□ -0.59
SH3TC1-225ENST00000515682 CRIP3Q6Q6R5 217 aa11.39□□□□□ -0.59
SH3TC1-225ENST00000515682 Q6ZWC4 215 aa11.39□□□□□ -0.59
SH3TC1-225ENST00000515682 SSUH2Q9Y2M2 353 aa11.39□□□□□ -0.59
SH3TC1-225ENST00000515682 CADP27708 2225 aa11.39□□□□□ -0.59
SH3TC1-225ENST00000515682 OR4A47Q6IF82 309 aa11.39□□□□□ -0.59
SH3TC1-225ENST00000515682 LCN12Q6JVE5 192 aa11.39□□□□□ -0.59
SH3TC1-225ENST00000515682 SPSB4Q96A44 273 aa11.39□□□□□ -0.59
SH3TC1-225ENST00000515682 ENSAO43768 121 aaKnown RBP11.39□□□□□ -0.59
SH3TC1-225ENST00000515682 PLAUP00749 431 aa11.39□□□□□ -0.59
SH3TC1-225ENST00000515682 CA1P00915 261 aaPredicted RBP11.39□□□□□ -0.59
SH3TC1-225ENST00000515682 GATA2P23769 480 aaPredicted RBP11.39□□□□□ -0.59
SH3TC1-225ENST00000515682 UCNP55089 124 aa11.39□□□□□ -0.59
SH3TC1-225ENST00000515682 KRTCAP3Q53RY4 240 aa11.39□□□□□ -0.59
SH3TC1-225ENST00000515682 TXNDC17Q9BRA2 123 aa11.39□□□□□ -0.59
SH3TC1-225ENST00000515682 SCNM1Q9BWG6 230 aa11.39□□□□□ -0.59
SH3TC1-225ENST00000515682 CHD7Q9P2D1 2997 aa11.39□□□□□ -0.59
SH3TC1-225ENST00000515682 IGHV3OR15-7A0A075B7D8 119 aa11.38□□□□□ -0.59
SH3TC1-225ENST00000515682 A0A1B0GWJ7 208 aa11.38□□□□□ -0.59
SH3TC1-225ENST00000515682 RBFOX2O43251 390 aaKnown RBP eCLIP11.38□□□□□ -0.591e-6■■■■□ 26.5
SH3TC1-225ENST00000515682 HLA-DQA1P01909 254 aa11.38□□□□□ -0.59
SH3TC1-225ENST00000515682 IL6RP08887 468 aaPredicted RBP11.38□□□□□ -0.59
SH3TC1-225ENST00000515682 OR2T6Q8NHC8 308 aa11.38□□□□□ -0.59
SH3TC1-225ENST00000515682 C2orf16Q68DN1 1984 aa11.38□□□□□ -0.59
SH3TC1-225ENST00000515682 SLC25A5P05141 298 aaKnown RBP11.38□□□□□ -0.59
SH3TC1-225ENST00000515682 SMIM15Q7Z3B0 74 aa11.38□□□□□ -0.59
SH3TC1-225ENST00000515682 OR4S2Q8NH73 311 aa11.38□□□□□ -0.59
SH3TC1-225ENST00000515682 H1FXQ92522 213 aaKnown RBP11.38□□□□□ -0.59
SH3TC1-225ENST00000515682 TCF19Q9Y242 345 aa11.38□□□□□ -0.59
SH3TC1-225ENST00000515682 FOXL1Q12952 345 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms