RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	POU2AF1	Q16633	256 aa		10.88	□□□□□ -0.67
CCHCR1-222	ENST00000507459	SLC25A42	Q86VD7	318 aa		10.88	□□□□□ -0.67
CCHCR1-222	ENST00000507459	PRR25	Q96S07	402 aa		10.88	□□□□□ -0.67
CCHCR1-222	ENST00000507459	RSRP1	Q9BUV0	290 aa		10.88	□□□□□ -0.67
CCHCR1-222	ENST00000507459	SLC2A9	Q9NRM0	540 aa		10.88	□□□□□ -0.67
CCHCR1-222	ENST00000507459	COMMD9	Q9P000	198 aa		10.88	□□□□□ -0.67
CCHCR1-222	ENST00000507459	PEF1	Q9UBV8	284 aa	Known RBP	10.88	□□□□□ -0.67
CCHCR1-222	ENST00000507459	ZNF257	Q9Y2Q1	563 aa		10.88	□□□□□ -0.67
CCHCR1-222	ENST00000507459	FAM223B	A6NKX1	122 aa		10.87	□□□□□ -0.67
CCHCR1-222	ENST00000507459	MARCH11	A6NNE9	402 aa		10.87	□□□□□ -0.67
CCHCR1-222	ENST00000507459	GABARAP	H6UMI1	98 aa		10.87	□□□□□ -0.67
CCHCR1-222	ENST00000507459	LY86	O95711	162 aa		10.87	□□□□□ -0.67
CCHCR1-222	ENST00000507459	TRBV12-3	P01733	135 aa		10.87	□□□□□ -0.67
CCHCR1-222	ENST00000507459	REG1A	P05451	166 aa		10.87	□□□□□ -0.67
CCHCR1-222	ENST00000507459	PGAM2	P15259	253 aa		10.87	□□□□□ -0.67
CCHCR1-222	ENST00000507459	ZP3	P21754	424 aa		10.87	□□□□□ -0.67
CCHCR1-222	ENST00000507459	G6PC	P35575	357 aa		10.87	□□□□□ -0.67
CCHCR1-222	ENST00000507459	INSL3	P51460	131 aa		10.87	□□□□□ -0.67
CCHCR1-222	ENST00000507459	UCP3	P55916	312 aa		10.87	□□□□□ -0.67
CCHCR1-222	ENST00000507459	ZNF585B	Q52M93	769 aa		10.87	□□□□□ -0.67
CCHCR1-222	ENST00000507459	ZNF343	Q6P1L6	599 aa		10.87	□□□□□ -0.67
CCHCR1-222	ENST00000507459	TBC1D26	Q86UD7	250 aa		10.87	□□□□□ -0.67
CCHCR1-222	ENST00000507459	ZNF429	Q86V71	674 aa		10.87	□□□□□ -0.67
CCHCR1-222	ENST00000507459	FAM223A	Q8IWN6	122 aa		10.87	□□□□□ -0.67
CCHCR1-222	ENST00000507459	SLC38A6	Q8IZM9	456 aa		10.87	□□□□□ -0.67
CCHCR1-222	ENST00000507459	OR4D10	Q8NGI6	311 aa		10.87	□□□□□ -0.67
CCHCR1-222	ENST00000507459	COMMD5	Q9GZQ3	224 aa		10.87	□□□□□ -0.67
CCHCR1-222	ENST00000507459	CEPT1	Q9Y6K0	416 aa		10.87	□□□□□ -0.67
CCHCR1-222	ENST00000507459	TRBV9	A0A0B4J1U6	114 aa		10.86	□□□□□ -0.67
CCHCR1-222	ENST00000507459	CGB1	A6NKQ9	187 aa		10.86	□□□□□ -0.67
CCHCR1-222	ENST00000507459	NPIPB5	A8MRT5	1133 aa		10.86	□□□□□ -0.67
CCHCR1-222	ENST00000507459	RAB3D	O95716	219 aa		10.86	□□□□□ -0.67
CCHCR1-222	ENST00000507459	PI3	P19957	117 aa		10.86	□□□□□ -0.67
CCHCR1-222	ENST00000507459	PSMB6	P28072	239 aa		10.86	□□□□□ -0.67
CCHCR1-222	ENST00000507459	TAS2R19	P59542	299 aa		10.86	□□□□□ -0.67
CCHCR1-222	ENST00000507459	OR2B8P	P59922	312 aa		10.86	□□□□□ -0.67
CCHCR1-222	ENST00000507459	EXOSC2	Q13868	293 aa	Known RBP	10.86	□□□□□ -0.67
CCHCR1-222	ENST00000507459	ACSM6	Q6P461	480 aa		10.86	□□□□□ -0.67
CCHCR1-222	ENST00000507459	TMEM229B	Q8NBD8	167 aa		10.86	□□□□□ -0.67
CCHCR1-222	ENST00000507459	NECAP1	Q8NC96	275 aa		10.86	□□□□□ -0.67
CCHCR1-222	ENST00000507459	OR4C12	Q96R67	309 aa		10.86	□□□□□ -0.67
CCHCR1-222	ENST00000507459	FBXL7	Q9UJT9	491 aa		10.86	□□□□□ -0.67
CCHCR1-222	ENST00000507459	NSG2	Q9Y328	171 aa		10.86	□□□□□ -0.67
CCHCR1-222	ENST00000507459	DHFR	P00374	187 aa		10.85	□□□□□ -0.67
CCHCR1-222	ENST00000507459	DEFA4	P12838	97 aa		10.85	□□□□□ -0.67
CCHCR1-222	ENST00000507459	TBP	P20226	339 aa		10.85	□□□□□ -0.67
CCHCR1-222	ENST00000507459	PPP5C	P53041	499 aa		10.85	□□□□□ -0.67
CCHCR1-222	ENST00000507459	SYNJ2BP	P57105	145 aa		10.85	□□□□□ -0.67
CCHCR1-222	ENST00000507459	MRPS10	P82664	201 aa	Known RBP	10.85	□□□□□ -0.67
CCHCR1-222	ENST00000507459	RPEL1	Q2QD12	228 aa		10.85	□□□□□ -0.67
CCHCR1-222	ENST00000507459	C15orf32	Q32M92	178 aa		10.85	□□□□□ -0.67
CCHCR1-222	ENST00000507459	SCGB2B2	Q4G0G5	96 aa		10.85	□□□□□ -0.67
CCHCR1-222	ENST00000507459	STEAP1B	Q6NZ63	245 aa		10.85	□□□□□ -0.67
CCHCR1-222	ENST00000507459	ARRDC1	Q8N5I2	433 aa		10.85	□□□□□ -0.67
CCHCR1-222	ENST00000507459	MCFD2	Q8NI22	146 aa		10.85	□□□□□ -0.67
CCHCR1-222	ENST00000507459	ELOVL1	Q9BW60	279 aa		10.85	□□□□□ -0.67
CCHCR1-222	ENST00000507459	HINT2	Q9BX68	163 aa		10.85	□□□□□ -0.67
CCHCR1-222	ENST00000507459	SLIRP	Q9GZT3	109 aa	Known RBP	10.85	□□□□□ -0.67
CCHCR1-222	ENST00000507459	ZNF256	Q9Y2P7	627 aa	Predicted RBP	10.85	□□□□□ -0.67
CCHCR1-222	ENST00000507459		S4R3C0	116 aa		10.85	□□□□□ -0.67
CCHCR1-222	ENST00000507459	TEX50	A0A1B0GTY4	177 aa		10.84	□□□□□ -0.67
CCHCR1-222	ENST00000507459	SNAPC5	O75971	98 aa		10.84	□□□□□ -0.67
CCHCR1-222	ENST00000507459	NDUFB8	O95169	186 aa		10.84	□□□□□ -0.67
CCHCR1-222	ENST00000507459	IGHV3-23	P01764	117 aa		10.84	□□□□□ -0.67
CCHCR1-222	ENST00000507459	CD74	P04233	296 aa		10.84	□□□□□ -0.67
CCHCR1-222	ENST00000507459	CRYGC	P07315	174 aa		10.84	□□□□□ -0.67
CCHCR1-222	ENST00000507459	CTRB1	P17538	263 aa		10.84	□□□□□ -0.67
CCHCR1-222	ENST00000507459	PIGP	P57054	158 aa		10.84	□□□□□ -0.67
CCHCR1-222	ENST00000507459	KLF5	Q13887	457 aa	Predicted RBP	10.84	□□□□□ -0.67
CCHCR1-222	ENST00000507459	CTRB2	Q6GPI1	263 aa		10.84	□□□□□ -0.67
CCHCR1-222	ENST00000507459	FAAP20	Q6NZ36	180 aa		10.84	□□□□□ -0.67
CCHCR1-222	ENST00000507459	HAPLN4	Q86UW8	402 aa		10.84	□□□□□ -0.67
CCHCR1-222	ENST00000507459	LHFPL1	Q86WI0	220 aa		10.84	□□□□□ -0.67
CCHCR1-222	ENST00000507459	OR10W1	Q8NGF6	305 aa		10.84	□□□□□ -0.67
CCHCR1-222	ENST00000507459	SMIM4	Q8WVI0	70 aa		10.84	□□□□□ -0.67
CCHCR1-222	ENST00000507459	FANCD2OS	Q96PS1	177 aa		10.84	□□□□□ -0.67
CCHCR1-222	ENST00000507459	QTRT1	Q9BXR0	403 aa	Known RBP	10.84	□□□□□ -0.67
CCHCR1-222	ENST00000507459	SORL1	Q92673	2214 aa		10.83	□□□□□ -0.68
CCHCR1-222	ENST00000507459	CTDSPL	O15194	276 aa		10.83	□□□□□ -0.68
CCHCR1-222	ENST00000507459	TRAPPC2	P0DI81	140 aa		10.83	□□□□□ -0.68
CCHCR1-222	ENST00000507459	TRAPPC2B	P0DI82	140 aa		10.83	□□□□□ -0.68
CCHCR1-222	ENST00000507459	SPN	P16150	400 aa		10.83	□□□□□ -0.68
CCHCR1-222	ENST00000507459	TNFSF8	P32971	234 aa		10.83	□□□□□ -0.68
CCHCR1-222	ENST00000507459	SSBP1	Q04837	148 aa	Known RBP	10.83	□□□□□ -0.68
CCHCR1-222	ENST00000507459	TATDN3	Q17R31	274 aa		10.83	□□□□□ -0.68
CCHCR1-222	ENST00000507459	OR9G4	Q8NGQ1	327 aa		10.83	□□□□□ -0.68
CCHCR1-222	ENST00000507459	OR6Q1	Q8NGQ2	317 aa		10.83	□□□□□ -0.68
CCHCR1-222	ENST00000507459	OR1L8	Q8NGR8	309 aa		10.83	□□□□□ -0.68
CCHCR1-222	ENST00000507459	TERB2	Q8NHR7	220 aa		10.83	□□□□□ -0.68
CCHCR1-222	ENST00000507459	RABL2A	Q9UBK7	228 aa	Predicted RBP	10.83	□□□□□ -0.68
CCHCR1-222	ENST00000507459	RABL2B	Q9UNT1	228 aa		10.83	□□□□□ -0.68
CCHCR1-222	ENST00000507459	OR51B2	Q9Y5P1	312 aa		10.83	□□□□□ -0.68
CCHCR1-222	ENST00000507459	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	10.82	□□□□□ -0.68
CCHCR1-222	ENST00000507459	IGLC7	A0M8Q6	106 aa		10.82	□□□□□ -0.68
CCHCR1-222	ENST00000507459	FABP12	A6NFH5	140 aa		10.82	□□□□□ -0.68
CCHCR1-222	ENST00000507459	PPP5D1	E7EU14	171 aa		10.82	□□□□□ -0.68
CCHCR1-222	ENST00000507459	BMPR1B	O00238	502 aa		10.82	□□□□□ -0.68
CCHCR1-222	ENST00000507459	IGKV1-39	P01597	117 aa		10.82	□□□□□ -0.68
CCHCR1-222	ENST00000507459	IGKV1D-39	P04432	117 aa		10.82	□□□□□ -0.68
CCHCR1-222	ENST00000507459	SERPINE2	P07093	398 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms