RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 CECR9P0C854 216 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 CHTF8P0CG12 524 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 C1GALT1C1LP0DN25 315 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 ZNF708P17019 499 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 CXCL2P19875 107 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 PRTN3P24158 256 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 CTRLP40313 264 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 OR3A4PP47883 348 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 SRP9P49458 86 aaKnown RBP3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 TBPL1P62380 186 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 LY6DQ14210 128 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 DEFB110Q30KQ9 67 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 FBXL19-AS1Q494R0 122 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 Q499Y3 187 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 FAM78BQ5VT40 261 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 KDM4DQ6B0I6 523 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 ZNF343Q6P1L6 599 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 ARL9Q6T311 187 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 PAMR1Q6UXH9 720 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 FBXW12Q6X9E4 464 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 NEGR1Q7Z3B1 354 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 GRINAQ7Z429 371 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 HSD17B13Q7Z5P4 300 aaPredicted RBP3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 GTSCR1Q86UQ5 136 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 Q8NBF4 154 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 OR2K2Q8NGT1 345 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 OR13D1Q8NGV5 346 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 CCL17Q92583 94 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 DIRAS2Q96HU8 199 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 SLC35G5Q96KT7 338 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 ZNF285Q96NJ3 590 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 OR2A7Q96R45 310 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 OR4K3Q96R72 315 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 SERPINI1Q99574 410 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 ZNF717Q9BY31 904 aaPredicted RBP3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 SPNS1Q9H2V7 528 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 HES4Q9HCC6 221 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 IDI2-AS1Q9NZ38 188 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 CTSZQ9UBR2 303 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 TAC3Q9UHF0 121 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 OR52A1Q9UKL2 312 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 SLC35A3Q9Y2D2 325 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 YTHDF2Q9Y5A9 579 aaKnown RBP3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 DNAJC15Q9Y5T4 150 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 ENPP4Q9Y6X5 453 aa3.13□□□□□ -1.91
PDLIM1P4-201ENST00000504327 SCN3AQ9NY46 2000 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 NOTCH2Q04721 2471 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 SPTAN1Q13813 2472 aaKnown RBP3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 IGLV7-46A0A075B6I9 117 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 TRAV8-3A0A0A6YYJ7 113 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 A0A0G2JN53 185 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 C5orf49A4QMS7 147 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 BBIP1A8MTZ0 92 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 EEF1E1-BLOC1S5C9J1V9 151 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 C8orf87E5RJ46 101 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 H0YGG7 62 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 BHLHE40O14503 412 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 ARPC5O15511 151 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 EEF1E1O43324 174 aaKnown RBP3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 NDUFA2O43678 99 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 PFDN1O60925 122 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 MED6O75586 246 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 TTRP02766 147 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 SLC25A1P53007 311 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 RBX1P62877 108 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 HPCAP84074 193 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 EMX2Q04743 252 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 BIKQ13323 160 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 PMAIP1Q13794 54 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 NSDHLQ15738 373 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 GUCA2BQ16661 112 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 CENPWQ5EE01 88 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 SLC25A30Q5SVS4 291 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 SPATA31B1PQ5VZV4 182 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 OPN5Q6U736 354 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 PLET1Q6UQ28 207 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 VN1R4Q7Z5H5 301 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 DOLPP1Q86YN1 238 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 TGIF2LYQ8IUE0 185 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 ZNF614Q8N883 585 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 ZNF439Q8NDP4 499 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 OR5K1Q8NHB7 308 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 TWIST2Q8WVJ9 160 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 C11orf40Q8WZ69 217 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 OR2A5Q96R48 311 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 VGLL1Q99990 258 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 GINS3Q9BRX5 216 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 SLCO1B3Q9NPD5 702 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 LHX9Q9NQ69 397 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 HDGFL3Q9Y3E1 203 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 INSIG2Q9Y5U4 225 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 F11RQ9Y624 299 aaKnown RBP3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 RELNP78509 3460 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 DOCK10Q96BY6 2186 aa3.12□□□□□ -1.91
PDLIM1P4-201ENST00000504327 SCN2AQ99250 2005 aa3.11□□□□□ -1.91
PDLIM1P4-201ENST00000504327 IGHV3OR16-10A0A075B7F0 116 aa3.11□□□□□ -1.91
PDLIM1P4-201ENST00000504327 IGHV6-1A0A0B4J1U7 121 aa3.11□□□□□ -1.91
PDLIM1P4-201ENST00000504327 IGHV3-35A0A0C4DH35 117 aa3.11□□□□□ -1.91
PDLIM1P4-201ENST00000504327 LOC389332A0A1B0GUA5 103 aa3.11□□□□□ -1.91
PDLIM1P4-201ENST00000504327 A0A1B0GVY2 172 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms