RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 ATG12O94817 140 aa7.99□□□□□ -1.13
RAB11FIP3-211ENST00000495663 OR2A4O95047 310 aa7.99□□□□□ -1.13
RAB11FIP3-211ENST00000495663 SAA1P0DJI8 122 aaPredicted RBP7.99□□□□□ -1.13
RAB11FIP3-211ENST00000495663 UCP1P25874 307 aa7.99□□□□□ -1.13
RAB11FIP3-211ENST00000495663 UBE2MP61081 183 aaKnown RBP7.99□□□□□ -1.13
RAB11FIP3-211ENST00000495663 CD83Q01151 205 aa7.99□□□□□ -1.13
RAB11FIP3-211ENST00000495663 DHODHQ02127 395 aa7.99□□□□□ -1.13
RAB11FIP3-211ENST00000495663 FOXL1Q12952 345 aa7.99□□□□□ -1.13
RAB11FIP3-211ENST00000495663 POU2AF1Q16633 256 aa7.99□□□□□ -1.13
RAB11FIP3-211ENST00000495663 TRIM16LQ309B1 348 aa7.99□□□□□ -1.13
RAB11FIP3-211ENST00000495663 SP6Q3SY56 376 aa7.99□□□□□ -1.13
RAB11FIP3-211ENST00000495663 SSX9Q7RTT3 188 aa7.99□□□□□ -1.13
RAB11FIP3-211ENST00000495663 SLC25A42Q86VD7 318 aa7.99□□□□□ -1.13
RAB11FIP3-211ENST00000495663 VKORC1L1Q8N0U8 176 aa7.99□□□□□ -1.13
RAB11FIP3-211ENST00000495663 Q8N2B8 174 aa7.99□□□□□ -1.13
RAB11FIP3-211ENST00000495663 TAF15Q92804 592 aaKnown RBP eCLIP7.99□□□□□ -1.13
RAB11FIP3-211ENST00000495663 GALNT14Q96FL9 552 aa7.99□□□□□ -1.13
RAB11FIP3-211ENST00000495663 OR2A7Q96R45 310 aa7.99□□□□□ -1.13
RAB11FIP3-211ENST00000495663 CLCC1Q96S66 551 aa7.99□□□□□ -1.13
RAB11FIP3-211ENST00000495663 TMEM222Q9H0R3 208 aa7.99□□□□□ -1.13
RAB11FIP3-211ENST00000495663 C16orf95Q9H693 158 aa7.99□□□□□ -1.13
RAB11FIP3-211ENST00000495663 BEX1Q9HBH7 125 aa7.99□□□□□ -1.13
RAB11FIP3-211ENST00000495663 FLVCR2Q9UPI3 526 aa7.99□□□□□ -1.13
RAB11FIP3-211ENST00000495663 NUBP2Q9Y5Y2 271 aa7.99□□□□□ -1.13
RAB11FIP3-211ENST00000495663 TRAV6A0A075B6T7 132 aa7.98□□□□□ -1.13
RAB11FIP3-211ENST00000495663 PIGBOS1A0A0B4J2F0 54 aa7.98□□□□□ -1.13
RAB11FIP3-211ENST00000495663 A0A1B0GUS0 222 aa7.98□□□□□ -1.13
RAB11FIP3-211ENST00000495663 TMEM89A2RUT3 159 aa7.98□□□□□ -1.13
RAB11FIP3-211ENST00000495663 KBTBD11O94819 623 aa7.98□□□□□ -1.13
RAB11FIP3-211ENST00000495663 CA2P00918 260 aa7.98□□□□□ -1.13
RAB11FIP3-211ENST00000495663 KRASP01116 189 aa7.98□□□□□ -1.13
RAB11FIP3-211ENST00000495663 IGHG2P01859 326 aa7.98□□□□□ -1.13
RAB11FIP3-211ENST00000495663 CRYGBP07316 175 aa7.98□□□□□ -1.13
RAB11FIP3-211ENST00000495663 G6PCP35575 357 aa7.98□□□□□ -1.13
RAB11FIP3-211ENST00000495663 VDAC2P45880 294 aaPredicted RBP7.98□□□□□ -1.13
RAB11FIP3-211ENST00000495663 SUPT4H1P63272 117 aaKnown RBP7.98□□□□□ -1.13
RAB11FIP3-211ENST00000495663 DCTN2Q13561 401 aaKnown RBP7.98□□□□□ -1.13
RAB11FIP3-211ENST00000495663 TM4SF20Q53R12 229 aa7.98□□□□□ -1.13
RAB11FIP3-211ENST00000495663 OR4A47Q6IF82 309 aa7.98□□□□□ -1.13
RAB11FIP3-211ENST00000495663 SLC35E3Q7Z769 313 aa7.98□□□□□ -1.13
RAB11FIP3-211ENST00000495663 FOXRED2Q8IWF2 684 aa7.98□□□□□ -1.13
RAB11FIP3-211ENST00000495663 MMD2Q8IY49 270 aa7.98□□□□□ -1.13
RAB11FIP3-211ENST00000495663 PUSL1Q8N0Z8 303 aaKnown RBP7.98□□□□□ -1.13
RAB11FIP3-211ENST00000495663 DUSP18Q8NEJ0 188 aa7.98□□□□□ -1.13
RAB11FIP3-211ENST00000495663 OR4A5Q8NH83 315 aa7.98□□□□□ -1.13
RAB11FIP3-211ENST00000495663 LINC01006Q8NI28 216 aa7.98□□□□□ -1.13
RAB11FIP3-211ENST00000495663 IL17DQ8TAD2 202 aa7.98□□□□□ -1.13
RAB11FIP3-211ENST00000495663 TMEM167AQ8TBQ9 72 aa7.98□□□□□ -1.13
RAB11FIP3-211ENST00000495663 GLYATL2Q8WU03 294 aa7.98□□□□□ -1.13
RAB11FIP3-211ENST00000495663 C19orf24Q9BVV8 132 aa7.98□□□□□ -1.13
RAB11FIP3-211ENST00000495663 NUDT15Q9NV35 164 aa7.98□□□□□ -1.13
RAB11FIP3-211ENST00000495663 BET1LQ9NYM9 111 aa7.98□□□□□ -1.13
RAB11FIP3-211ENST00000495663 FBN1P35555 2871 aaKnown RBP7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 IGHV7-81A0A0B4J1V7 117 aa7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 CLPSL1A2RUU4 121 aa7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 FCN1O00602 326 aa7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 ACTL6BO94805 426 aa7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 SFT2D2O95562 160 aa7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 CDS2O95674 445 aa7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 IGKV1-39P01597 117 aa7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 HLA-AP01891 365 aaKnown RBP7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 IGKV1D-39P04432 117 aa7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 OR4E1P0C645 316 aa7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 ANXA7P20073 488 aaKnown RBP7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 MDKP21741 143 aaPredicted RBP7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 AKR1C2P52895 323 aa7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 SRPXP78539 464 aa7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 PPP1R1AQ13522 171 aa7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 TMEM187Q14656 261 aa7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 PLET1Q6UQ28 207 aa7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 ZNF562Q6V9R5 426 aa7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 NRARPQ7Z6K4 114 aa7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 ZNF695Q8IW36 515 aa7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 CADM3Q8N126 398 aa7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 RNASE11Q8TAA1 199 aaKnown RBP7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 RBPMSQ93062 196 aaKnown RBP7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 IL22RA2Q969J5 263 aa7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 SEC22AQ96IW7 307 aa7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 HSPB9Q9BQS6 159 aa7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 ALX4Q9H161 411 aaPredicted RBP7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 OR51J1Q9H342 316 aa7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 TMEM140Q9NV12 185 aa7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 MMP24Q9Y5R2 645 aa7.97□□□□□ -1.13
RAB11FIP3-211ENST00000495663 C9orf170A2RU37 121 aa7.96□□□□□ -1.14
RAB11FIP3-211ENST00000495663 AP4M1O00189 453 aa7.96□□□□□ -1.14
RAB11FIP3-211ENST00000495663 CNIH1O95406 144 aa7.96□□□□□ -1.14
RAB11FIP3-211ENST00000495663 PTTG1O95997 202 aa7.96□□□□□ -1.14
RAB11FIP3-211ENST00000495663 MAS1LP35410 378 aa7.96□□□□□ -1.14
RAB11FIP3-211ENST00000495663 MECP2P51608 486 aaKnown RBP7.96□□□□□ -1.14
RAB11FIP3-211ENST00000495663 GNB1P62873 340 aa7.96□□□□□ -1.14
RAB11FIP3-211ENST00000495663 CX3CL1P78423 397 aa7.96□□□□□ -1.14
RAB11FIP3-211ENST00000495663 PJVKQ0ZLH3 352 aa7.96□□□□□ -1.14
RAB11FIP3-211ENST00000495663 FXYD3Q14802 87 aa7.96□□□□□ -1.14
RAB11FIP3-211ENST00000495663 TNXAQ16473 311 aa7.96□□□□□ -1.14
RAB11FIP3-211ENST00000495663 PRSS8Q16651 343 aa7.96□□□□□ -1.14
RAB11FIP3-211ENST00000495663 TMEM95Q3KNT9 176 aa7.96□□□□□ -1.14
RAB11FIP3-211ENST00000495663 C4orf46Q504U0 113 aa7.96□□□□□ -1.14
RAB11FIP3-211ENST00000495663 TMEM268Q5VZI3 342 aa7.96□□□□□ -1.14
RAB11FIP3-211ENST00000495663 H2BFWTQ7Z2G1 175 aa7.96□□□□□ -1.14
RAB11FIP3-211ENST00000495663 LYG2Q86SG7 212 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms