RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 FYTTD1Q96QD9 318 aaKnown RBP15.16■□□□□ 0.02
HDAC4-212ENST00000495497 CGB1A6NKQ9 187 aa15.15■□□□□ 0.02
HDAC4-212ENST00000495497 TEX22C9J3V5 150 aa15.15■□□□□ 0.02
HDAC4-212ENST00000495497 PLA2G10O15496 165 aa15.15■□□□□ 0.02
HDAC4-212ENST00000495497 MAS1LP35410 378 aa15.15■□□□□ 0.02
HDAC4-212ENST00000495497 RAB9AP51151 201 aa15.15■□□□□ 0.02
HDAC4-212ENST00000495497 KIAA0141Q14154 515 aaPredicted RBP15.15■□□□□ 0.02
HDAC4-212ENST00000495497 TMED4Q7Z7H5 227 aa15.15■□□□□ 0.02
HDAC4-212ENST00000495497 ZNF355PQ9NSJ1 428 aa15.15■□□□□ 0.02
HDAC4-212ENST00000495497 ZFP57Q9NU63 452 aa15.15■□□□□ 0.02
HDAC4-212ENST00000495497 PRR13Q9NZ81 148 aa15.15■□□□□ 0.02
HDAC4-212ENST00000495497 NAP1L6A6NFF2 107 aa15.14■□□□□ 0.01
HDAC4-212ENST00000495497 NUDT19A8MXV4 375 aa15.14■□□□□ 0.01
HDAC4-212ENST00000495497 IGKV1-5P01602 117 aa15.14■□□□□ 0.01
HDAC4-212ENST00000495497 UCP1P25874 307 aa15.14■□□□□ 0.01
HDAC4-212ENST00000495497 BTCP35070 178 aa15.14■□□□□ 0.01
HDAC4-212ENST00000495497 OR2B8PP59922 312 aa15.14■□□□□ 0.01
HDAC4-212ENST00000495497 IZUMO4Q1ZYL8 232 aa15.14■□□□□ 0.01
HDAC4-212ENST00000495497 C19orf35Q6ZS72 473 aa15.14■□□□□ 0.01
HDAC4-212ENST00000495497 C8orf86Q6ZUL3 223 aa15.14■□□□□ 0.01
HDAC4-212ENST00000495497 KLHL30-AS1Q8NEE0 82 aa15.14■□□□□ 0.01
HDAC4-212ENST00000495497 OR5M8Q8NGP6 311 aa15.14■□□□□ 0.01
HDAC4-212ENST00000495497 LHFPL5Q8TAF8 219 aa15.14■□□□□ 0.01
HDAC4-212ENST00000495497 GLYATL2Q8WU03 294 aa15.14■□□□□ 0.01
HDAC4-212ENST00000495497 CCDC32Q9BV29 185 aa15.14■□□□□ 0.01
HDAC4-212ENST00000495497 TMEM222Q9H0R3 208 aa15.14■□□□□ 0.01
HDAC4-212ENST00000495497 TEX50A0A1B0GTY4 177 aa15.13■□□□□ 0.01
HDAC4-212ENST00000495497 CD40LGP29965 261 aa15.13■□□□□ 0.01
HDAC4-212ENST00000495497 DEFA5Q01523 94 aa15.13■□□□□ 0.01
HDAC4-212ENST00000495497 ZNF846Q147U1 533 aa15.13■□□□□ 0.01
HDAC4-212ENST00000495497 TREML4Q6UXN2 200 aa15.13■□□□□ 0.01
HDAC4-212ENST00000495497 H2BFWTQ7Z2G1 175 aa15.13■□□□□ 0.01
HDAC4-212ENST00000495497 SGPP2Q8IWX5 399 aa15.13■□□□□ 0.01
HDAC4-212ENST00000495497 ZNF491Q8N8L2 437 aa15.13■□□□□ 0.01
HDAC4-212ENST00000495497 MYOZ3Q8TDC0 251 aa15.13■□□□□ 0.01
HDAC4-212ENST00000495497 TMEM68Q96MH6 324 aa15.13■□□□□ 0.01
HDAC4-212ENST00000495497 OR5B12Q96R08 314 aa15.13■□□□□ 0.01
HDAC4-212ENST00000495497 SPIN2AQ99865 258 aa15.13■□□□□ 0.01
HDAC4-212ENST00000495497 SPIN2BQ9BPZ2 258 aa15.13■□□□□ 0.01
HDAC4-212ENST00000495497 SLC25A21Q9BQT8 299 aaPredicted RBP15.13■□□□□ 0.01
HDAC4-212ENST00000495497 GNB4Q9HAV0 340 aa15.13■□□□□ 0.01
HDAC4-212ENST00000495497 COA4Q9NYJ1 87 aa15.13■□□□□ 0.01
HDAC4-212ENST00000495497 TNCP24821 2201 aa15.13■□□□□ 0.01
HDAC4-212ENST00000495497 DBX1A6NMT0 343 aa15.12■□□□□ 0.01
HDAC4-212ENST00000495497 CENPXA8MT69 81 aa15.12■□□□□ 0.01
HDAC4-212ENST00000495497 PRH1P02810 166 aa15.12■□□□□ 0.01
HDAC4-212ENST00000495497 SUPT4H1P63272 117 aaKnown RBP15.12■□□□□ 0.01
HDAC4-212ENST00000495497 ZNF695Q8IW36 515 aa15.12■□□□□ 0.01
HDAC4-212ENST00000495497 SELENOHQ8IZQ5 122 aaKnown RBP15.12■□□□□ 0.01
HDAC4-212ENST00000495497 DUX3Q96PT4 197 aa15.12■□□□□ 0.01
HDAC4-212ENST00000495497 C7orf50Q9BRJ6 194 aaKnown RBP15.12■□□□□ 0.01
HDAC4-212ENST00000495497 WDR12Q9GZL7 423 aaKnown RBP15.12■□□□□ 0.01
HDAC4-212ENST00000495497 COMMD5Q9GZQ3 224 aa15.12■□□□□ 0.01
HDAC4-212ENST00000495497 FLVCR2Q9UPI3 526 aa15.12■□□□□ 0.01
HDAC4-212ENST00000495497 A0A0G2JRQ6 117 aa15.11■□□□□ 0.01
HDAC4-212ENST00000495497 B3GALNT1O75752 331 aa15.11■□□□□ 0.01
HDAC4-212ENST00000495497 SNAPC5O75971 98 aa15.11■□□□□ 0.01
HDAC4-212ENST00000495497 CDS2O95674 445 aa15.11■□□□□ 0.01
HDAC4-212ENST00000495497 TRGV3P03979 118 aa15.11■□□□□ 0.01
HDAC4-212ENST00000495497 REG1AP05451 166 aa15.11■□□□□ 0.01
HDAC4-212ENST00000495497 AREGP15514 252 aa15.11■□□□□ 0.01
HDAC4-212ENST00000495497 CDX1P47902 265 aaPredicted RBP15.11■□□□□ 0.01
HDAC4-212ENST00000495497 AKR1C2P52895 323 aa15.11■□□□□ 0.01
HDAC4-212ENST00000495497 TPPP2P59282 170 aa15.11■□□□□ 0.01
HDAC4-212ENST00000495497 DHODHQ02127 395 aa15.11■□□□□ 0.01
HDAC4-212ENST00000495497 TMEM187Q14656 261 aa15.11■□□□□ 0.01
HDAC4-212ENST00000495497 RBMS2Q15434 407 aaKnown RBP15.11■□□□□ 0.01
HDAC4-212ENST00000495497 DEFB136Q30KP8 78 aa15.11■□□□□ 0.01
HDAC4-212ENST00000495497 TTC9CQ8N5M4 171 aa15.11■□□□□ 0.01
HDAC4-212ENST00000495497 OR4F17Q8NGA8 305 aa15.11■□□□□ 0.01
HDAC4-212ENST00000495497 OR4F4Q96R69 305 aa15.11■□□□□ 0.01
HDAC4-212ENST00000495497 OR51B2Q9Y5P1 312 aa15.11■□□□□ 0.01
HDAC4-212ENST00000495497 LYRM1O43325 122 aa15.1■□□□□ 0.01
HDAC4-212ENST00000495497 NDUFB6O95139 128 aa15.1■□□□□ 0.01
HDAC4-212ENST00000495497 TMEM268Q5VZI3 342 aa15.1■□□□□ 0.01
HDAC4-212ENST00000495497 ETV3LQ6ZN32 361 aa15.1■□□□□ 0.01
HDAC4-212ENST00000495497 CADM3Q8N126 398 aa15.1■□□□□ 0.01
HDAC4-212ENST00000495497 OR10W1Q8NGF6 305 aa15.1■□□□□ 0.01
HDAC4-212ENST00000495497 OR4A16Q8NH70 328 aa15.1■□□□□ 0.01
HDAC4-212ENST00000495497 GALNT14Q96FL9 552 aa15.1■□□□□ 0.01
HDAC4-212ENST00000495497 HINT2Q9BX68 163 aa15.1■□□□□ 0.01
HDAC4-212ENST00000495497 ALX4Q9H161 411 aaPredicted RBP15.1■□□□□ 0.01
HDAC4-212ENST00000495497 KCNIP3Q9Y2W7 256 aa15.1■□□□□ 0.01
HDAC4-212ENST00000495497 C15orf61A6NNL5 157 aa15.09■□□□□ 0.01
HDAC4-212ENST00000495497 RBMXL2O75526 392 aaKnown RBP15.09■□□□□ 0.01
HDAC4-212ENST00000495497 IGHV3-11P01762 117 aa15.09■□□□□ 0.01
HDAC4-212ENST00000495497 P0C879 139 aa15.09■□□□□ 0.01
HDAC4-212ENST00000495497 TRAPPC2P0DI81 140 aa15.09■□□□□ 0.01
HDAC4-212ENST00000495497 TRAPPC2BP0DI82 140 aa15.09■□□□□ 0.01
HDAC4-212ENST00000495497 CENPSQ8N2Z9 138 aa15.09■□□□□ 0.01
HDAC4-212ENST00000495497 RAX2Q96IS3 184 aa15.09■□□□□ 0.01
HDAC4-212ENST00000495497 UBE2E2Q96LR5 201 aa15.09■□□□□ 0.01
HDAC4-212ENST00000495497 TMEM56Q96MV1 263 aa15.09■□□□□ 0.01
HDAC4-212ENST00000495497 TSC22D3Q99576 134 aa15.09■□□□□ 0.01
HDAC4-212ENST00000495497 QTRT1Q9BXR0 403 aaKnown RBP15.09■□□□□ 0.01
HDAC4-212ENST00000495497 PRNDQ9UKY0 176 aa15.09■□□□□ 0.01
HDAC4-212ENST00000495497 TBC1D24Q9ULP9 559 aa15.09■□□□□ 0.01
HDAC4-212ENST00000495497 TMEM56-RWDD3S4R434 201 aa15.09■□□□□ 0.01
HDAC4-212ENST00000495497 A0A0B4J293 547 aa15.08■□□□□ 0
HDAC4-212ENST00000495497 H3BUA1 57 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms