RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 PRR20AP86496 221 aa13.03□□□□□ -0.32
NUP50-218ENST00000493456 RBMS2Q15434 407 aaKnown RBP13.03□□□□□ -0.32
NUP50-218ENST00000493456 TCTEX1D2Q8WW35 142 aa13.03□□□□□ -0.32
NUP50-218ENST00000493456 DAZ1Q9NQZ3 744 aaKnown RBP13.03□□□□□ -0.32
NUP50-218ENST00000493456 THYN1Q9P016 225 aa13.03□□□□□ -0.32
NUP50-218ENST00000493456 A0A075B6Q4 140 aa13.02□□□□□ -0.33
NUP50-218ENST00000493456 J3QRK9 145 aa13.02□□□□□ -0.33
NUP50-218ENST00000493456 RAB27BO00194 218 aa13.02□□□□□ -0.33
NUP50-218ENST00000493456 HRASP01112 189 aa13.02□□□□□ -0.33
NUP50-218ENST00000493456 IGLV2-14P01704 120 aa13.02□□□□□ -0.33
NUP50-218ENST00000493456 REG1AP05451 166 aa13.02□□□□□ -0.33
NUP50-218ENST00000493456 CTXN2P0C2S0 81 aa13.02□□□□□ -0.33
NUP50-218ENST00000493456 DTYMKP23919 212 aa13.02□□□□□ -0.33
NUP50-218ENST00000493456 CRHBPP24387 322 aa13.02□□□□□ -0.33
NUP50-218ENST00000493456 CALRP27797 417 aaKnown RBP13.02□□□□□ -0.33
NUP50-218ENST00000493456 FCGR2BP31994 310 aaPredicted RBP13.02□□□□□ -0.33
NUP50-218ENST00000493456 OR4A5Q8NH83 315 aa13.02□□□□□ -0.33
NUP50-218ENST00000493456 C11orf45Q8TAV5 145 aa13.02□□□□□ -0.33
NUP50-218ENST00000493456 C2CD4CQ8TF44 421 aa13.02□□□□□ -0.33
NUP50-218ENST00000493456 FBXL17Q9UF56 701 aa13.02□□□□□ -0.33
NUP50-218ENST00000493456 ABCA13Q86UQ4 5058 aa13.02□□□□□ -0.33
NUP50-218ENST00000493456 IGKV1D-8A0A087WSZ0 117 aa13.01□□□□□ -0.33
NUP50-218ENST00000493456 IGHV3-35A0A0C4DH35 117 aa13.01□□□□□ -0.33
NUP50-218ENST00000493456 TGOLN2O43493 480 aa13.01□□□□□ -0.33
NUP50-218ENST00000493456 HLA-GP17693 338 aa13.01□□□□□ -0.33
NUP50-218ENST00000493456 PTBP1P26599 531 aaKnown RBP eCLIP13.01□□□□□ -0.33
NUP50-218ENST00000493456 NANOS2P60321 138 aaKnown RBP13.01□□□□□ -0.33
NUP50-218ENST00000493456 IRF3Q14653 427 aa13.01□□□□□ -0.33
NUP50-218ENST00000493456 ARL6IP1Q15041 203 aa13.01□□□□□ -0.33
NUP50-218ENST00000493456 HES5Q5TA89 166 aa13.01□□□□□ -0.33
NUP50-218ENST00000493456 RARRES2Q99969 163 aa13.01□□□□□ -0.33
NUP50-218ENST00000493456 BET1LQ9NYM9 111 aa13.01□□□□□ -0.33
NUP50-218ENST00000493456 DYNC1H1Q14204 4646 aaKnown RBP13.01□□□□□ -0.33
NUP50-218ENST00000493456 S1PR2O95136 353 aa13□□□□□ -0.33
NUP50-218ENST00000493456 RAB6AP20340 208 aa13□□□□□ -0.33
NUP50-218ENST00000493456 NFYAP23511 347 aaPredicted RBP13□□□□□ -0.33
NUP50-218ENST00000493456 RPS25P62851 125 aaKnown RBP13□□□□□ -0.33
NUP50-218ENST00000493456 EIF4EBP1Q13541 118 aaPredicted RBP13□□□□□ -0.33
NUP50-218ENST00000493456 ZNF66Q6ZN08 573 aa13□□□□□ -0.33
NUP50-218ENST00000493456 LINC00336Q6ZUF6 198 aa13□□□□□ -0.33
NUP50-218ENST00000493456 SRSF8Q9BRL6 282 aaKnown RBP13□□□□□ -0.33
NUP50-218ENST00000493456 AIFM2Q9BRQ8 373 aa13□□□□□ -0.33
NUP50-218ENST00000493456 CSTL1Q9H114 145 aa13□□□□□ -0.33
NUP50-218ENST00000493456 SPATA2Q9UM82 520 aa13□□□□□ -0.33
NUP50-218ENST00000493456 METTL21EPA6NDL7 271 aa12.99□□□□□ -0.33
NUP50-218ENST00000493456 CGB1A6NKQ9 187 aa12.99□□□□□ -0.33
NUP50-218ENST00000493456 MPTX1A8MV57 137 aa12.99□□□□□ -0.33
NUP50-218ENST00000493456 PTGES3LE9PB15 166 aa12.99□□□□□ -0.33
NUP50-218ENST00000493456 CYB5BO43169 146 aa12.99□□□□□ -0.33
NUP50-218ENST00000493456 BRWD1-AS2P59051 145 aa12.99□□□□□ -0.33
NUP50-218ENST00000493456 SSX9Q7RTT3 188 aa12.99□□□□□ -0.33
NUP50-218ENST00000493456 MFSD4AQ8N468 514 aa12.99□□□□□ -0.33
NUP50-218ENST00000493456 OR5B3Q8NH48 314 aa12.99□□□□□ -0.33
NUP50-218ENST00000493456 CD300LFQ8TDQ1 290 aa12.99□□□□□ -0.33
NUP50-218ENST00000493456 VN1R17PQ8TDU5 208 aa12.99□□□□□ -0.33
NUP50-218ENST00000493456 BSCL2Q96G97 398 aaPredicted RBP12.99□□□□□ -0.33
NUP50-218ENST00000493456 DNAH11Q96DT5 4516 aa12.98□□□□□ -0.33
NUP50-218ENST00000493456 IGKV1D-13A0A0B4J2D9 117 aa12.98□□□□□ -0.33
NUP50-218ENST00000493456 NDUFA4O00483 81 aa12.98□□□□□ -0.33
NUP50-218ENST00000493456 HSMCR30P0CW71 290 aa12.98□□□□□ -0.33
NUP50-218ENST00000493456 IGKV1-13P0DP09 117 aa12.98□□□□□ -0.33
NUP50-218ENST00000493456 ADMP35318 185 aa12.98□□□□□ -0.33
NUP50-218ENST00000493456 OR2B8PP59922 312 aa12.98□□□□□ -0.33
NUP50-218ENST00000493456 TIMM50Q3ZCQ8 353 aa12.98□□□□□ -0.33
NUP50-218ENST00000493456 SPSB3Q6PJ21 355 aa12.98□□□□□ -0.33
NUP50-218ENST00000493456 ATP6V0BQ99437 205 aa12.98□□□□□ -0.33
NUP50-218ENST00000493456 TAS2R8Q9NYW2 309 aa12.98□□□□□ -0.33
NUP50-218ENST00000493456 IGLC7A0M8Q6 106 aa12.97□□□□□ -0.33
NUP50-218ENST00000493456 OR2T8A6NH00 312 aa12.97□□□□□ -0.33
NUP50-218ENST00000493456 RPA2P15927 270 aa12.97□□□□□ -0.33
NUP50-218ENST00000493456 CMC4P56277 68 aaPredicted RBP12.97□□□□□ -0.33
NUP50-218ENST00000493456 FABP5Q01469 135 aa12.97□□□□□ -0.33
NUP50-218ENST00000493456 CNIH2Q6PI25 160 aa12.97□□□□□ -0.33
NUP50-218ENST00000493456 APRG1Q8IVJ8 170 aa12.97□□□□□ -0.33
NUP50-218ENST00000493456 OR11H2Q8NH07 326 aa12.97□□□□□ -0.33
NUP50-218ENST00000493456 DCSTAMPQ9H295 470 aa12.97□□□□□ -0.33
NUP50-218ENST00000493456 HRASLSQ9HDD0 168 aa12.97□□□□□ -0.33
NUP50-218ENST00000493456 SCN3BQ9NY72 215 aa12.97□□□□□ -0.33
NUP50-218ENST00000493456 IFITM5A6NNB3 132 aa12.96□□□□□ -0.33
NUP50-218ENST00000493456 K7EMT4 169 aa12.96□□□□□ -0.33
NUP50-218ENST00000493456 PDCD5O14737 125 aa12.96□□□□□ -0.33
NUP50-218ENST00000493456 CTSDP07339 412 aaPredicted RBP12.96□□□□□ -0.33
NUP50-218ENST00000493456 FGF2P09038 288 aa12.96□□□□□ -0.33
NUP50-218ENST00000493456 MED14OSP0DP75 135 aa12.96□□□□□ -0.33
NUP50-218ENST00000493456 MLLT11Q13015 90 aaPredicted RBP12.96□□□□□ -0.33
NUP50-218ENST00000493456 COMMD5Q9GZQ3 224 aa12.96□□□□□ -0.33
NUP50-218ENST00000493456 ACOT13Q9NPJ3 140 aa12.96□□□□□ -0.33
NUP50-218ENST00000493456 PKD1P98161 4303 aa12.96□□□□□ -0.33
NUP50-218ENST00000493456 C11orf94C9JXX5 98 aa12.95□□□□□ -0.34
NUP50-218ENST00000493456 RBFOX2O43251 390 aaKnown RBP eCLIP12.95□□□□□ -0.34
NUP50-218ENST00000493456 MFAP2P55001 183 aa12.95□□□□□ -0.34
NUP50-218ENST00000493456 MSMO1Q15800 293 aa12.95□□□□□ -0.34
NUP50-218ENST00000493456 HACD4Q5VWC8 232 aa12.95□□□□□ -0.34
NUP50-218ENST00000493456 THOC7Q6I9Y2 204 aaKnown RBP12.95□□□□□ -0.34
NUP50-218ENST00000493456 GVQW1Q8N7I0 195 aa12.95□□□□□ -0.34
NUP50-218ENST00000493456 GDPD1Q8N9F7 314 aa12.95□□□□□ -0.34
NUP50-218ENST00000493456 C20orf24Q9BUV8 137 aa12.95□□□□□ -0.34
NUP50-218ENST00000493456 ELF5Q9UKW6 265 aaPredicted RBP12.95□□□□□ -0.34
NUP50-218ENST00000493456 APLNQ9ULZ1 77 aa12.95□□□□□ -0.34
NUP50-218ENST00000493456 C15orf62A8K5M9 175 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms