RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 A0A1B0GVX0 72 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 OR5H1A6NKK0 313 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 SIGLEC16A6NMB1 481 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 OR11H12B2RN74 326 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 INS-IGF2F8WCM5 200 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 TMEM250H0YL14 139 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 UPK2O00526 184 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 MED6O75586 246 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 GPR75O95800 540 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 INSP01308 110 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 HBZP02008 142 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 SOD3P08294 240 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 ORM2P19652 201 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 HSPA9P38646 679 aaKnown RBP2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 MARCKSL1P49006 195 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 DAPP51397 102 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 RWDD2BP57060 319 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 RAB4BP61018 213 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 HERVK_113P63121 156 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 FABP5Q01469 135 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 PDGFRLQ15198 375 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 PYCR3Q53H96 274 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 EBLN2Q6P2I7 272 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 Q6ZR54 194 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 ADM2Q7Z4H4 148 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 DPPA2Q7Z7J5 298 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 DAZ4Q86SG3 579 aaKnown RBP2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 UBL4BQ8N7F7 174 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 POM121L12Q8N7R1 296 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 TMEM35BQ8NCS4 154 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 OR11H1Q8NG94 326 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 OR4M2Q8NGB6 313 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 OR11H2Q8NH07 326 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 C15orf40Q8WUR7 153 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 APOBEC3DQ96AK3 386 aaPredicted RBP2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 FAM210BQ96KR6 192 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 C1orf50Q9BV19 199 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 DAZ1Q9NQZ3 744 aaKnown RBP2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 DOK5Q9P104 306 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 CNOT1A5YKK6 2376 aaKnown RBP2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 CACNA1EQ15878 2313 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 CACNA1AO00555 2505 aa2.16□□□□□ -2.06
DEPDC1-204ENST00000489862 CFAP47Q6ZTR5 3102 aa2.15□□□□□ -2.06
DEPDC1-204ENST00000489862 FANCMQ8IYD8 2048 aa2.15□□□□□ -2.06
DEPDC1-204ENST00000489862 DSPP15924 2871 aaKnown RBP2.15□□□□□ -2.06
DEPDC1-204ENST00000489862 MUC22E2RYF6 1773 aaPredicted RBP2.15□□□□□ -2.06
DEPDC1-204ENST00000489862 DOCK4Q8N1I0 1966 aa2.15□□□□□ -2.06
DEPDC1-204ENST00000489862 CHD8Q9HCK8 2581 aa2.15□□□□□ -2.06
DEPDC1-204ENST00000489862 NBEAQ8NFP9 2946 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 IGLV3-10A0A075B6K4 115 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 IGKV1-12A0A0C4DH73 117 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 C11orf94C9JXX5 98 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 H0YJW9 148 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 OR2B3O76000 313 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 FSTL3O95633 263 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 IGKV1D-12P01611 117 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 C1QBP02746 253 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 CRHP06850 196 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 KRTAP1-4P0C5Y4 121 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 CD79AP11912 226 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 HLA-EP13747 358 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 GTF2F2P13984 249 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 HIST1H1TP22492 207 aaPredicted RBP2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 OMGP23515 440 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 GLRXP35754 106 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 PSMB3P49720 205 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 DAD1P61803 113 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 BTN1A1Q13410 526 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 KIAA0040Q15053 153 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 MPV17L2Q567V2 206 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 UBE2NLQ5JXB2 153 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 MRPL2Q5T653 305 aaKnown RBP2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 LAIR2Q6ISS4 152 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 SCGB1D4Q6XE38 83 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 TCF23Q7RTU1 214 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 SLC16A13Q7RTY0 426 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 MDP1Q86V88 176 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 PDPNQ86YL7 162 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 EIF4E3Q8N5X7 224 aaKnown RBP2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 C15orf56Q8N910 161 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 LY6G5BQ8NDX9 201 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 OR51A2Q8NGJ7 313 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 C16orf74Q96GX8 76 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 MCEEQ96PE7 176 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 DERL3Q96Q80 235 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 GINS3Q9BRX5 216 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 KIFC1Q9BW19 673 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 NMNAT1Q9HAN9 279 aaPredicted RBP2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 ZNF225Q9UK10 706 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 ANAPC10Q9UM13 185 aa2.15□□□□□ -2.07
DEPDC1-204ENST00000489862 CABIN1Q9Y6J0 2220 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 CROCCQ5TZA2 2017 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 A0A0G2JMP0 313 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 TMEM72A0PK05 275 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 PQLC2LA1A4F0 135 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 D6RAR5 112 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 TMX2-CTNND1H3BSU7 103 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 M0R381 172 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 BCL2L11O43521 198 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 OR5G3P0C626 314 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms