RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 CMTM1Q8IZ96 169 aa8.74□□□□□ -1.01
SPEN-205ENST00000487496 FANCD2OSQ96PS1 177 aa8.74□□□□□ -1.01
SPEN-205ENST00000487496 ASCL2Q99929 193 aa8.74□□□□□ -1.01
SPEN-205ENST00000487496 MRPS26Q9BYN8 205 aaKnown RBP8.74□□□□□ -1.01
SPEN-205ENST00000487496 FXYD6Q9H0Q3 95 aa8.74□□□□□ -1.01
SPEN-205ENST00000487496 TMEM140Q9NV12 185 aa8.74□□□□□ -1.01
SPEN-205ENST00000487496 COMMD9Q9P000 198 aa8.74□□□□□ -1.01
SPEN-205ENST00000487496 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.73□□□□□ -1.01
SPEN-205ENST00000487496 FAM25AB3EWG3 89 aa8.73□□□□□ -1.01
SPEN-205ENST00000487496 FAM25CB3EWG5 89 aa8.73□□□□□ -1.01
SPEN-205ENST00000487496 FAM25GB3EWG6 89 aa8.73□□□□□ -1.01
SPEN-205ENST00000487496 BMPR1BO00238 502 aa8.73□□□□□ -1.01
SPEN-205ENST00000487496 GPR31O00270 319 aa8.73□□□□□ -1.01
SPEN-205ENST00000487496 NDUFB8O95169 186 aa8.73□□□□□ -1.01
SPEN-205ENST00000487496 DHFRP00374 187 aa8.73□□□□□ -1.01
SPEN-205ENST00000487496 CSN3P07498 182 aa8.73□□□□□ -1.01
SPEN-205ENST00000487496 RPA2P15927 270 aa8.73□□□□□ -1.01
SPEN-205ENST00000487496 CTRB1P17538 263 aa8.73□□□□□ -1.01
SPEN-205ENST00000487496 RCVRNP35243 200 aa8.73□□□□□ -1.01
SPEN-205ENST00000487496 TSPAN5P62079 268 aa8.73□□□□□ -1.01
SPEN-205ENST00000487496 KLK9Q2XQG4 91 aa8.73□□□□□ -1.01
SPEN-205ENST00000487496 CTRB2Q6GPI1 263 aa8.73□□□□□ -1.01
SPEN-205ENST00000487496 DMBX1Q8NFW5 382 aa8.73□□□□□ -1.01
SPEN-205ENST00000487496 DGCR14Q96DF8 476 aaKnown RBP8.73□□□□□ -1.01
SPEN-205ENST00000487496 COMMD5Q9GZQ3 224 aa8.73□□□□□ -1.01
SPEN-205ENST00000487496 FBXL7Q9UJT9 491 aa8.73□□□□□ -1.01
SPEN-205ENST00000487496 KLK9Q9UKQ9 250 aa8.73□□□□□ -1.01
SPEN-205ENST00000487496 DMRT1Q9Y5R6 373 aa8.73□□□□□ -1.01
SPEN-205ENST00000487496 PPP5D1E7EU14 171 aa8.72□□□□□ -1.01
SPEN-205ENST00000487496 REG1AP05451 166 aa8.72□□□□□ -1.01
SPEN-205ENST00000487496 FGF2P09038 288 aa8.72□□□□□ -1.01
SPEN-205ENST00000487496 LPAR6P43657 344 aa8.72□□□□□ -1.01
SPEN-205ENST00000487496 ZNF585BQ52M93 769 aa8.72□□□□□ -1.01
SPEN-205ENST00000487496 PHLDA2Q53GA4 152 aa8.72□□□□□ -1.01
SPEN-205ENST00000487496 FAM209BQ5JX69 171 aa8.72□□□□□ -1.01
SPEN-205ENST00000487496 GPR141Q7Z602 305 aa8.72□□□□□ -1.01
SPEN-205ENST00000487496 FCAMRQ8WWV6 532 aa8.72□□□□□ -1.01
SPEN-205ENST00000487496 SIGLEC8Q9NYZ4 499 aa8.72□□□□□ -1.01
SPEN-205ENST00000487496 IGLV11-55A0A075B6I3 123 aa8.71□□□□□ -1.02
SPEN-205ENST00000487496 IGLC7A0M8Q6 106 aa8.71□□□□□ -1.02
SPEN-205ENST00000487496 MARCH11A6NNE9 402 aa8.71□□□□□ -1.02
SPEN-205ENST00000487496 H0Y980 276 aa8.71□□□□□ -1.02
SPEN-205ENST00000487496 KRASP01116 189 aa8.71□□□□□ -1.02
SPEN-205ENST00000487496 IGHV3-23P01764 117 aa8.71□□□□□ -1.02
SPEN-205ENST00000487496 DEFA4P12838 97 aa8.71□□□□□ -1.02
SPEN-205ENST00000487496 HIST1H1BP16401 226 aaKnown RBP8.71□□□□□ -1.02
SPEN-205ENST00000487496 UCP3P55916 312 aa8.71□□□□□ -1.02
SPEN-205ENST00000487496 RNASE12Q5GAN4 147 aaKnown RBP8.71□□□□□ -1.02
SPEN-205ENST00000487496 LPCAT3Q6P1A2 487 aa8.71□□□□□ -1.02
SPEN-205ENST00000487496 CADM3Q8N126 398 aa8.71□□□□□ -1.02
SPEN-205ENST00000487496 Q8N1Y9 231 aa8.71□□□□□ -1.02
SPEN-205ENST00000487496 ABHD1Q96SE0 405 aa8.71□□□□□ -1.02
SPEN-205ENST00000487496 SRSF8Q9BRL6 282 aaKnown RBP8.71□□□□□ -1.02
SPEN-205ENST00000487496 QTRT1Q9BXR0 403 aaKnown RBP8.71□□□□□ -1.02
SPEN-205ENST00000487496 PEMTQ9UBM1 199 aa8.71□□□□□ -1.02
SPEN-205ENST00000487496 EXTL2Q9UBQ6 330 aa8.71□□□□□ -1.02
SPEN-205ENST00000487496 KLK11Q9UBX7 282 aa8.71□□□□□ -1.02
SPEN-205ENST00000487496 S4R3C0 116 aa8.71□□□□□ -1.02
SPEN-205ENST00000487496 U3KQK5 164 aa8.71□□□□□ -1.02
SPEN-205ENST00000487496 COL7A1Q02388 2944 aa8.7□□□□□ -1.02
SPEN-205ENST00000487496 TEX50A0A1B0GTY4 177 aa8.7□□□□□ -1.02
SPEN-205ENST00000487496 M0QYG6 137 aa8.7□□□□□ -1.02
SPEN-205ENST00000487496 GGCTO75223 188 aaKnown RBP8.7□□□□□ -1.02
SPEN-205ENST00000487496 TPPPO94811 219 aa8.7□□□□□ -1.02
SPEN-205ENST00000487496 OR2C1O95371 312 aa8.7□□□□□ -1.02
SPEN-205ENST00000487496 HLA-AP01891 365 aaKnown RBP8.7□□□□□ -1.02
SPEN-205ENST00000487496 FRMD6-AS1P0C7T7 363 aa8.7□□□□□ -1.02
SPEN-205ENST00000487496 S100GP29377 79 aa8.7□□□□□ -1.02
SPEN-205ENST00000487496 G6PCP35575 357 aa8.7□□□□□ -1.02
SPEN-205ENST00000487496 MECP2P51608 486 aaKnown RBP8.7□□□□□ -1.02
SPEN-205ENST00000487496 ERVK-16P61578 105 aa8.7□□□□□ -1.02
SPEN-205ENST00000487496 SPCS2Q15005 226 aa8.7□□□□□ -1.02
SPEN-205ENST00000487496 CLEC19AQ6UXS0 136 aa8.7□□□□□ -1.02
SPEN-205ENST00000487496 TBC1D26Q86UD7 250 aa8.7□□□□□ -1.02
SPEN-205ENST00000487496 SBSPONQ8IVN8 264 aa8.7□□□□□ -1.02
SPEN-205ENST00000487496 SLC38A6Q8IZM9 456 aa8.7□□□□□ -1.02
SPEN-205ENST00000487496 OR10W1Q8NGF6 305 aa8.7□□□□□ -1.02
SPEN-205ENST00000487496 OR52I2Q8NH67 350 aa8.7□□□□□ -1.02
SPEN-205ENST00000487496 EEF1AKMT3Q96AZ1 226 aa8.7□□□□□ -1.02
SPEN-205ENST00000487496 CCDC140Q96MF4 163 aa8.7□□□□□ -1.02
SPEN-205ENST00000487496 WWC2-AS2Q96NR7 200 aa8.7□□□□□ -1.02
SPEN-205ENST00000487496 MIXL1Q9H2W2 232 aa8.7□□□□□ -1.02
SPEN-205ENST00000487496 MTFP1Q9UDX5 166 aa8.7□□□□□ -1.02
SPEN-205ENST00000487496 NSG2Q9Y328 171 aa8.7□□□□□ -1.02
SPEN-205ENST00000487496 MFSD2BA6NFX1 497 aa8.69□□□□□ -1.02
SPEN-205ENST00000487496 CTDSP2O14595 271 aa8.69□□□□□ -1.02
SPEN-205ENST00000487496 TRAPPC2P0DI81 140 aa8.69□□□□□ -1.02
SPEN-205ENST00000487496 TRAPPC2BP0DI82 140 aa8.69□□□□□ -1.02
SPEN-205ENST00000487496 OR13C7P0DN81 318 aa8.69□□□□□ -1.02
SPEN-205ENST00000487496 ARL3P36405 182 aa8.69□□□□□ -1.02
SPEN-205ENST00000487496 WT1-ASQ06250 92 aa8.69□□□□□ -1.02
SPEN-205ENST00000487496 THOC7Q6I9Y2 204 aaKnown RBP8.69□□□□□ -1.02
SPEN-205ENST00000487496 ADAMTSL5Q6ZMM2 481 aa8.69□□□□□ -1.02
SPEN-205ENST00000487496 LHFPL1Q86WI0 220 aa8.69□□□□□ -1.02
SPEN-205ENST00000487496 GPHB5Q86YW7 130 aa8.69□□□□□ -1.02
SPEN-205ENST00000487496 CLVS1Q8IUQ0 354 aaPredicted RBP8.69□□□□□ -1.02
SPEN-205ENST00000487496 Q8N402 240 aa8.69□□□□□ -1.02
SPEN-205ENST00000487496 OR1L8Q8NGR8 309 aa8.69□□□□□ -1.02
SPEN-205ENST00000487496 C15orf40Q8WUR7 153 aa8.69□□□□□ -1.02
SPEN-205ENST00000487496 CXorf58Q96LI9 332 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms