RNA–Protein interactions for RNA: ENST00000481965.6

SEC22A-207, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22A, Length 673 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-207ENST00000481965 GUSBP08236 651 aa3.42□□□□□ -1.86
SEC22A-207ENST00000481965 CXCL8P10145 99 aa3.42□□□□□ -1.86
SEC22A-207ENST00000481965 GABRA3P34903 492 aa3.42□□□□□ -1.86
SEC22A-207ENST00000481965 HSPA9P38646 679 aaKnown RBP3.42□□□□□ -1.86
SEC22A-207ENST00000481965 REEP5Q00765 189 aa3.42□□□□□ -1.86
SEC22A-207ENST00000481965 TMEM267Q0VDI3 215 aaPredicted RBP3.42□□□□□ -1.86
SEC22A-207ENST00000481965 LCN8Q6JVE9 175 aa3.42□□□□□ -1.86
SEC22A-207ENST00000481965 BPIFB6Q8NFQ5 453 aa3.42□□□□□ -1.86
SEC22A-207ENST00000481965 PTH2Q96A98 100 aa3.42□□□□□ -1.86
SEC22A-207ENST00000481965 ANKRD36BP1Q96IX9 119 aa3.42□□□□□ -1.86
SEC22A-207ENST00000481965 TRIB3Q96RU7 358 aa3.42□□□□□ -1.86
SEC22A-207ENST00000481965 CXCL16Q9H2A7 254 aa3.42□□□□□ -1.86
SEC22A-207ENST00000481965 OR51V1Q9H2C8 321 aa3.42□□□□□ -1.86
SEC22A-207ENST00000481965 TAS2R9Q9NYW1 312 aa3.42□□□□□ -1.86
SEC22A-207ENST00000481965 TAS2R1Q9NYW7 299 aa3.42□□□□□ -1.86
SEC22A-207ENST00000481965 SEC16AO15027 2179 aa3.41□□□□□ -1.86
SEC22A-207ENST00000481965 ATG2BQ96BY7 2078 aa3.41□□□□□ -1.86
SEC22A-207ENST00000481965 SH2D1AO60880 128 aa3.41□□□□□ -1.86
SEC22A-207ENST00000481965 TNNC2P02585 160 aa3.41□□□□□ -1.86
SEC22A-207ENST00000481965 CSRP1P21291 193 aaKnown RBP3.41□□□□□ -1.86
SEC22A-207ENST00000481965 CRABP2P29373 138 aa3.41□□□□□ -1.86
SEC22A-207ENST00000481965 RAP1GDS1P52306 607 aa3.41□□□□□ -1.86
SEC22A-207ENST00000481965 AP2S1P53680 142 aaPredicted RBP3.41□□□□□ -1.86
SEC22A-207ENST00000481965 AP3S2P59780 193 aa3.41□□□□□ -1.86
SEC22A-207ENST00000481965 ACTBP60709 375 aa3.41□□□□□ -1.86
SEC22A-207ENST00000481965 ACTG1P63261 375 aa3.41□□□□□ -1.86
SEC22A-207ENST00000481965 MRPS25P82663 173 aaKnown RBP3.41□□□□□ -1.86
SEC22A-207ENST00000481965 TFAMQ00059 246 aaKnown RBP3.41□□□□□ -1.86
SEC22A-207ENST00000481965 FLI1Q01543 452 aaPredicted RBP3.41□□□□□ -1.86
SEC22A-207ENST00000481965 BIKQ13323 160 aa3.41□□□□□ -1.86
SEC22A-207ENST00000481965 PPP1R1AQ13522 171 aa3.41□□□□□ -1.86
SEC22A-207ENST00000481965 N4BP2L1Q5TBK1 243 aaPredicted RBP3.41□□□□□ -1.86
SEC22A-207ENST00000481965 ZNF720Q7Z2F6 126 aa3.41□□□□□ -1.86
SEC22A-207ENST00000481965 NIT1Q86X76 327 aa3.41□□□□□ -1.86
SEC22A-207ENST00000481965 LYPD6Q86Y78 171 aa3.41□□□□□ -1.86
SEC22A-207ENST00000481965 C10orf67Q8IYJ2 551 aa3.41□□□□□ -1.86
SEC22A-207ENST00000481965 Q8NAQ8 132 aa3.41□□□□□ -1.86
SEC22A-207ENST00000481965 TSTD1Q8NFU3 115 aa3.41□□□□□ -1.86
SEC22A-207ENST00000481965 OR51H1Q8NH63 302 aa3.41□□□□□ -1.86
SEC22A-207ENST00000481965 PIGXQ8TBF5 258 aa3.41□□□□□ -1.86
SEC22A-207ENST00000481965 TLCD1Q96CP7 247 aa3.41□□□□□ -1.86
SEC22A-207ENST00000481965 EBNA1BP2Q99848 306 aaKnown RBP3.41□□□□□ -1.86
SEC22A-207ENST00000481965 MAP1LC3AQ9H492 121 aa3.41□□□□□ -1.86
SEC22A-207ENST00000481965 GUCA1BQ9UMX6 200 aa3.41□□□□□ -1.86
SEC22A-207ENST00000481965 MRPS16Q9Y3D3 137 aaKnown RBP3.41□□□□□ -1.86
SEC22A-207ENST00000481965 PATJQ8NI35 1801 aa3.41□□□□□ -1.86
SEC22A-207ENST00000481965 CHD8Q9HCK8 2581 aa3.41□□□□□ -1.86
SEC22A-207ENST00000481965 GGTLC3B5MD39 225 aa3.4□□□□□ -1.87
SEC22A-207ENST00000481965 APODP05090 189 aa3.4□□□□□ -1.87
SEC22A-207ENST00000481965 CALB1P05937 261 aa3.4□□□□□ -1.87
SEC22A-207ENST00000481965 FBP1P09467 338 aa3.4□□□□□ -1.87
SEC22A-207ENST00000481965 HMGA1P17096 107 aaKnown RBP3.4□□□□□ -1.87
SEC22A-207ENST00000481965 CXCR4P61073 352 aa3.4□□□□□ -1.87
SEC22A-207ENST00000481965 SNRPFP62306 86 aaKnown RBP3.4□□□□□ -1.87
SEC22A-207ENST00000481965 IHHQ14623 411 aa3.4□□□□□ -1.87
SEC22A-207ENST00000481965 PDCD11Q14690 1871 aaKnown RBP3.4□□□□□ -1.87
SEC22A-207ENST00000481965 OR8G1Q15617 311 aa3.4□□□□□ -1.87
SEC22A-207ENST00000481965 Q6ZS52 159 aa3.4□□□□□ -1.87
SEC22A-207ENST00000481965 ATP5L2Q7Z4Y8 100 aa3.4□□□□□ -1.87
SEC22A-207ENST00000481965 ZFAND2AQ8N6M9 145 aa3.4□□□□□ -1.87
SEC22A-207ENST00000481965 OR2V1Q8NHB1 315 aa3.4□□□□□ -1.87
SEC22A-207ENST00000481965 CCDC42Q96M95 316 aa3.4□□□□□ -1.87
SEC22A-207ENST00000481965 OR7D2Q96RA2 312 aa3.4□□□□□ -1.87
SEC22A-207ENST00000481965 GREB1Q4ZG55 1949 aa3.4□□□□□ -1.87
SEC22A-207ENST00000481965 PCNX2A6NKB5 2137 aa3.4□□□□□ -1.87
SEC22A-207ENST00000481965 MAP1BP46821 2468 aaKnown RBP3.39□□□□□ -1.87
SEC22A-207ENST00000481965 SHANK1Q9Y566 2161 aa3.39□□□□□ -1.87
SEC22A-207ENST00000481965 FAM208BQ5VWN6 2430 aa3.39□□□□□ -1.87
SEC22A-207ENST00000481965 TCHHQ07283 1943 aa3.39□□□□□ -1.87
SEC22A-207ENST00000481965 TMEM114B3SHH9 223 aa3.39□□□□□ -1.87
SEC22A-207ENST00000481965 TGOLN2O43493 480 aa3.39□□□□□ -1.87
SEC22A-207ENST00000481965 IGLV3-19P01714 112 aa3.39□□□□□ -1.87
SEC22A-207ENST00000481965 IFNA6P05013 189 aa3.39□□□□□ -1.87
SEC22A-207ENST00000481965 IL6P05231 212 aa3.39□□□□□ -1.87
SEC22A-207ENST00000481965 RPS17P08708 135 aaKnown RBP3.39□□□□□ -1.87
SEC22A-207ENST00000481965 CTXN2P0C2S0 81 aa3.39□□□□□ -1.87
SEC22A-207ENST00000481965 OR1E2P47887 323 aa3.39□□□□□ -1.87
SEC22A-207ENST00000481965 KRTAP10-8P60410 259 aa3.39□□□□□ -1.87
SEC22A-207ENST00000481965 TSPAN31Q12999 210 aa3.39□□□□□ -1.87
SEC22A-207ENST00000481965 MAPK14Q16539 360 aa3.39□□□□□ -1.87
SEC22A-207ENST00000481965 SPIN4Q56A73 249 aa3.39□□□□□ -1.87
SEC22A-207ENST00000481965 AMMECR1LQ6DCA0 310 aa3.39□□□□□ -1.87
SEC22A-207ENST00000481965 SCXQ7RTU7 201 aa3.39□□□□□ -1.87
SEC22A-207ENST00000481965 LYZL2Q7Z4W2 148 aa3.39□□□□□ -1.87
SEC22A-207ENST00000481965 HS3ST5Q8IZT8 346 aa3.39□□□□□ -1.87
SEC22A-207ENST00000481965 OR8K1Q8NGG5 319 aa3.39□□□□□ -1.87
SEC22A-207ENST00000481965 STACQ99469 402 aa3.39□□□□□ -1.87
SEC22A-207ENST00000481965 MED18Q9BUE0 208 aa3.39□□□□□ -1.87
SEC22A-207ENST00000481965 MED28Q9H204 178 aa3.39□□□□□ -1.87
SEC22A-207ENST00000481965 DUSP21Q9H596 190 aa3.39□□□□□ -1.87
SEC22A-207ENST00000481965 CCL26Q9Y258 94 aa3.39□□□□□ -1.87
SEC22A-207ENST00000481965 HDGFL3Q9Y3E1 203 aa3.39□□□□□ -1.87
SEC22A-207ENST00000481965 VPS13AQ96RL7 3174 aa3.39□□□□□ -1.87
SEC22A-207ENST00000481965 NUP210Q8TEM1 1887 aaPredicted RBP3.39□□□□□ -1.87
SEC22A-207ENST00000481965 PI4KAP42356 2102 aa3.38□□□□□ -1.87
SEC22A-207ENST00000481965 CEP295Q9C0D2 2601 aa3.38□□□□□ -1.87
SEC22A-207ENST00000481965 A0A1B0GU33 70 aa3.38□□□□□ -1.87
SEC22A-207ENST00000481965 VPS37CA5D8V6 355 aaPredicted RBP3.38□□□□□ -1.87
SEC22A-207ENST00000481965 COPEO14579 308 aa3.38□□□□□ -1.87
SEC22A-207ENST00000481965 EEF1E1O43324 174 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms