RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 HRASP01112 189 aa11.8□□□□□ -0.52
DDX56-210ENST00000479440 HLA-GP17693 338 aa11.8□□□□□ -0.52
DDX56-210ENST00000479440 PTBP1P26599 531 aaKnown RBP eCLIP11.8□□□□□ -0.52
DDX56-210ENST00000479440 CMC4P56277 68 aaPredicted RBP11.8□□□□□ -0.52
DDX56-210ENST00000479440 CLDN12P56749 244 aa11.8□□□□□ -0.52
DDX56-210ENST00000479440 RPL30P62888 115 aaKnown RBP11.8□□□□□ -0.52
DDX56-210ENST00000479440 IRF3Q14653 427 aa11.8□□□□□ -0.52
DDX56-210ENST00000479440 Q6ZS49 121 aa11.8□□□□□ -0.52
DDX56-210ENST00000479440 OR4A5Q8NH83 315 aa11.8□□□□□ -0.52
DDX56-210ENST00000479440 BSCL2Q96G97 398 aaPredicted RBP11.8□□□□□ -0.52
DDX56-210ENST00000479440 HSD17B10Q99714 261 aaKnown RBP11.8□□□□□ -0.52
DDX56-210ENST00000479440 RAB22AQ9UL26 194 aa11.8□□□□□ -0.52
DDX56-210ENST00000479440 AK6Q9Y3D8 172 aaKnown RBP11.8□□□□□ -0.52
DDX56-210ENST00000479440 PKHD1P08F94 4074 aa11.8□□□□□ -0.52
DDX56-210ENST00000479440 NDUFA4O00483 81 aa11.79□□□□□ -0.52
DDX56-210ENST00000479440 CTSDP07339 412 aaPredicted RBP11.79□□□□□ -0.52
DDX56-210ENST00000479440 RPA2P15927 270 aa11.79□□□□□ -0.52
DDX56-210ENST00000479440 GNB3P16520 340 aa11.79□□□□□ -0.52
DDX56-210ENST00000479440 C2orf76Q3KRA6 126 aa11.79□□□□□ -0.52
DDX56-210ENST00000479440 SSX9Q7RTT3 188 aa11.79□□□□□ -0.52
DDX56-210ENST00000479440 NR2C2APQ86WQ0 139 aa11.79□□□□□ -0.52
DDX56-210ENST00000479440 OR10R2Q8NGX6 335 aa11.79□□□□□ -0.52
DDX56-210ENST00000479440 UFD1Q92890 307 aa11.79□□□□□ -0.52
DDX56-210ENST00000479440 HRH4Q9H3N8 390 aa11.79□□□□□ -0.52
DDX56-210ENST00000479440 OR2W1Q9Y3N9 320 aa11.79□□□□□ -0.52
DDX56-210ENST00000479440 DNAH2Q9P225 4427 aa11.78□□□□□ -0.52
DDX56-210ENST00000479440 A0A075B6Q4 140 aa11.78□□□□□ -0.52
DDX56-210ENST00000479440 TMEM272A0A1B0GTI8 110 aa11.78□□□□□ -0.52
DDX56-210ENST00000479440 OR2T8A6NH00 312 aa11.78□□□□□ -0.52
DDX56-210ENST00000479440 PRSS29PA6NIE9 313 aa11.78□□□□□ -0.52
DDX56-210ENST00000479440 CA1P00915 261 aaPredicted RBP11.78□□□□□ -0.52
DDX56-210ENST00000479440 HIST1H1DP16402 221 aaKnown RBP11.78□□□□□ -0.52
DDX56-210ENST00000479440 SPSB3Q6PJ21 355 aa11.78□□□□□ -0.52
DDX56-210ENST00000479440 C8orf59Q8N0T1 100 aaPredicted RBP11.78□□□□□ -0.52
DDX56-210ENST00000479440 DHRSXQ8N5I4 330 aa11.78□□□□□ -0.52
DDX56-210ENST00000479440 BPIFB6Q8NFQ5 453 aa11.78□□□□□ -0.52
DDX56-210ENST00000479440 VN1R17PQ8TDU5 208 aa11.78□□□□□ -0.52
DDX56-210ENST00000479440 SRSF8Q9BRL6 282 aaKnown RBP11.78□□□□□ -0.52
DDX56-210ENST00000479440 AIFM2Q9BRQ8 373 aa11.78□□□□□ -0.52
DDX56-210ENST00000479440 C20orf24Q9BUV8 137 aa11.78□□□□□ -0.52
DDX56-210ENST00000479440 PLCXD1Q9NUJ7 323 aa11.78□□□□□ -0.52
DDX56-210ENST00000479440 BET1LQ9NYM9 111 aa11.78□□□□□ -0.52
DDX56-210ENST00000479440 SPATA2Q9UM82 520 aa11.78□□□□□ -0.52
DDX56-210ENST00000479440 DEFB4AO15263 64 aa11.77□□□□□ -0.53
DDX56-210ENST00000479440 HLA-DQB1P01920 261 aa11.77□□□□□ -0.53
DDX56-210ENST00000479440 CTXN2P0C2S0 81 aa11.77□□□□□ -0.53
DDX56-210ENST00000479440 DTYMKP23919 212 aa11.77□□□□□ -0.53
DDX56-210ENST00000479440 TMEM187Q14656 261 aa11.77□□□□□ -0.53
DDX56-210ENST00000479440 SPHARQ15513 63 aa11.77□□□□□ -0.53
DDX56-210ENST00000479440 TIMM50Q3ZCQ8 353 aa11.77□□□□□ -0.53
DDX56-210ENST00000479440 CENPSQ8N2Z9 138 aa11.77□□□□□ -0.53
DDX56-210ENST00000479440 HRASLSQ9HDD0 168 aa11.77□□□□□ -0.53
DDX56-210ENST00000479440 DYNC1H1Q14204 4646 aaKnown RBP11.76□□□□□ -0.53
DDX56-210ENST00000479440 IGLC7A0M8Q6 106 aa11.76□□□□□ -0.53
DDX56-210ENST00000479440 CGB1A6NKQ9 187 aa11.76□□□□□ -0.53
DDX56-210ENST00000479440 K7EMT4 169 aa11.76□□□□□ -0.53
DDX56-210ENST00000479440 RAB27BO00194 218 aa11.76□□□□□ -0.53
DDX56-210ENST00000479440 MRPS14O60783 128 aaKnown RBP11.76□□□□□ -0.53
DDX56-210ENST00000479440 IGLV2-14P01704 120 aa11.76□□□□□ -0.53
DDX56-210ENST00000479440 NFYAP23511 347 aaPredicted RBP11.76□□□□□ -0.53
DDX56-210ENST00000479440 OR2B8PP59922 312 aa11.76□□□□□ -0.53
DDX56-210ENST00000479440 PLA2G7Q13093 441 aa11.76□□□□□ -0.53
DDX56-210ENST00000479440 TRAM1Q15629 374 aa11.76□□□□□ -0.53
DDX56-210ENST00000479440 ZNF124Q15973 351 aa11.76□□□□□ -0.53
DDX56-210ENST00000479440 THOC7Q6I9Y2 204 aaKnown RBP11.76□□□□□ -0.53
DDX56-210ENST00000479440 LAIR2Q6ISS4 152 aa11.76□□□□□ -0.53
DDX56-210ENST00000479440 ZNF66Q6ZN08 573 aa11.76□□□□□ -0.53
DDX56-210ENST00000479440 TMEM203Q969S6 136 aa11.76□□□□□ -0.53
DDX56-210ENST00000479440 ATP6V0BQ99437 205 aa11.76□□□□□ -0.53
DDX56-210ENST00000479440 C8orf4Q9NR00 106 aa11.76□□□□□ -0.53
DDX56-210ENST00000479440 FKBP14Q9NWM8 211 aa11.76□□□□□ -0.53
DDX56-210ENST00000479440 V9GY05 133 aa11.76□□□□□ -0.53
DDX56-210ENST00000479440 DNAH11Q96DT5 4516 aa11.76□□□□□ -0.53
DDX56-210ENST00000479440 IGHV4-4A0A075B6R2 117 aa11.75□□□□□ -0.53
DDX56-210ENST00000479440 IGKV1D-8A0A087WSZ0 117 aa11.75□□□□□ -0.53
DDX56-210ENST00000479440 TRAV10A0A0B4J240 114 aa11.75□□□□□ -0.53
DDX56-210ENST00000479440 C15orf62A8K5M9 175 aa11.75□□□□□ -0.53
DDX56-210ENST00000479440 PSMA1P25786 263 aaKnown RBP11.75□□□□□ -0.53
DDX56-210ENST00000479440 CALRP27797 417 aaKnown RBP11.75□□□□□ -0.53
DDX56-210ENST00000479440 ARL6IP1Q15041 203 aa11.75□□□□□ -0.53
DDX56-210ENST00000479440 HES5Q5TA89 166 aa11.75□□□□□ -0.53
DDX56-210ENST00000479440 LIPKQ5VXJ0 399 aa11.75□□□□□ -0.53
DDX56-210ENST00000479440 MFSD4AQ8N468 514 aa11.75□□□□□ -0.53
DDX56-210ENST00000479440 CMTM3Q96MX0 182 aa11.75□□□□□ -0.53
DDX56-210ENST00000479440 COMMD5Q9GZQ3 224 aa11.75□□□□□ -0.53
DDX56-210ENST00000479440 TAS2R8Q9NYW2 309 aa11.75□□□□□ -0.53
DDX56-210ENST00000479440 LSM2Q9Y333 95 aaKnown RBP11.75□□□□□ -0.53
DDX56-210ENST00000479440 ZNF207O43670 478 aaKnown RBP11.74□□□□□ -0.53
DDX56-210ENST00000479440 TFPI2P48307 235 aa11.74□□□□□ -0.53
DDX56-210ENST00000479440 EIF4EBP1Q13541 118 aaPredicted RBP11.74□□□□□ -0.53
DDX56-210ENST00000479440 PVRIGQ6DKI7 326 aa11.74□□□□□ -0.53
DDX56-210ENST00000479440 TMEM91Q6ZNR0 172 aa11.74□□□□□ -0.53
DDX56-210ENST00000479440 PACRGLQ8N7B6 248 aa11.74□□□□□ -0.53
DDX56-210ENST00000479440 GDPD1Q8N9F7 314 aa11.74□□□□□ -0.53
DDX56-210ENST00000479440 RNF2Q99496 336 aa11.74□□□□□ -0.53
DDX56-210ENST00000479440 C21orf62Q9NYP8 219 aa11.74□□□□□ -0.53
DDX56-210ENST00000479440 ETV7Q9Y603 341 aa11.74□□□□□ -0.53
DDX56-210ENST00000479440 IGHV3OR16-8A0A075B7F1 116 aa11.73□□□□□ -0.53
DDX56-210ENST00000479440 IGKV1D-13A0A0B4J2D9 117 aa11.73□□□□□ -0.53
DDX56-210ENST00000479440 METTL21EPA6NDL7 271 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms