RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 C3orf84H3BNL1 204 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 ARHGEF10O15013 1369 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 NDUFA2O43678 99 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 PFDN1O60925 122 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 MT-CO2P00403 227 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 C1QBP02746 253 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 FBP1P09467 338 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 FAM236CP0DP71 79 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 CCL1P22362 96 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 GABRA3P34903 492 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 HSPA9P38646 679 aaKnown RBP2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 SRP9P49458 86 aaKnown RBP2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 CDC42P60953 191 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 SNRPD2P62316 118 aaKnown RBP2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 GRIN2BQ13224 1484 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 TMEM128Q5BJH2 165 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 AKR1C8PQ5T2L2 129 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 C9orf64Q5T6V5 341 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 ZNF322Q6U7Q0 402 aaPredicted RBP2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 C5orf46Q6UWT4 87 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 GOLT1AQ6ZVE7 132 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 TMEM75Q8N9X5 138 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 OR10D4PQ8NGN7 298 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 THOC2Q8NI27 1593 aaKnown RBP2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 LHFPL5Q8TAF8 219 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 LMX1AQ8TE12 382 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 CT55Q8WUE5 264 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 C20orf166-AS1Q96NR2 134 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 GPER1Q99527 375 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 RNASE7Q9H1E1 156 aaKnown RBP2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 GTSF1LQ9H1H1 148 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 SH3BGRL3Q9H299 93 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 FAM96AQ9H5X1 160 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 PARVBQ9HBI1 364 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 LRTM1Q9HBL6 345 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 LYRM2Q9NU23 88 aaPredicted RBP2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 C14orf105Q9NVL8 296 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 ZNF407Q9C0G0 2248 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 CEP170Q5SW79 1584 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 BAZ1AQ9NRL2 1556 aaPredicted RBP2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 PLCH2O75038 1416 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 TRAV26-2A0A0B4J265 109 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 TRAPPC13A5PLN9 417 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 MAP1LC3B2A6NCE7 125 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 OR4C45A6NMZ5 311 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 MFSD11O43934 449 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 SERPINE1P05121 402 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 OR10J4P0C629 311 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 SPI1P17947 270 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 ERP29P30040 261 aaKnown RBP2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 OR10J1P30954 320 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 PHBP35232 272 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 AP1S1P61966 158 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 HERVK_113P63121 156 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 PSPHP78330 225 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 OR8G1Q15617 311 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 CCDC153Q494R4 210 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 DCUN1D2Q6PH85 259 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 SCXQ7RTU7 201 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 YIPF7Q8N8F6 280 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 OR8B12Q8NGG6 310 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 OR2T4Q8NH00 348 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 GPR119Q8TDV5 335 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 MS4A6EQ96DS6 147 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 DNAJC30Q96LL9 226 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 TBX5Q99593 518 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 MAP1LC3BQ9GZQ8 125 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 MED28Q9H204 178 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 ZNF286AQ9HBT8 521 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 PRTFDC1Q9NRG1 225 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 UQCC1Q9NVA1 299 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 SS18L2Q9UHA2 77 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 PRNDQ9UKY0 176 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 PXMP4Q9Y6I8 212 aa2.03□□□□□ -2.08
SMNDC1-205ENST00000477763 CACNA1DQ01668 2161 aa2.02□□□□□ -2.09
SMNDC1-205ENST00000477763 SETD5Q9C0A6 1442 aa2.02□□□□□ -2.09
SMNDC1-205ENST00000477763 IGHV1-69-2A0A0G2JMI3 117 aa2.02□□□□□ -2.09
SMNDC1-205ENST00000477763 KNCNA6PVL3 124 aa2.02□□□□□ -2.09
SMNDC1-205ENST00000477763 A8MWP6 167 aa2.02□□□□□ -2.09
SMNDC1-205ENST00000477763 E7EQ34 232 aa2.02□□□□□ -2.09
SMNDC1-205ENST00000477763 G3V2T6 193 aa2.02□□□□□ -2.09
SMNDC1-205ENST00000477763 SLC17A3O00476 420 aa2.02□□□□□ -2.09
SMNDC1-205ENST00000477763 MRASO14807 208 aa2.02□□□□□ -2.09
SMNDC1-205ENST00000477763 DEDDO75618 318 aa2.02□□□□□ -2.09
SMNDC1-205ENST00000477763 APOMO95445 188 aa2.02□□□□□ -2.09
SMNDC1-205ENST00000477763 IGLV3-27P01718 113 aa2.02□□□□□ -2.09
SMNDC1-205ENST00000477763 HLA-DRB1P01911 266 aa2.02□□□□□ -2.09
SMNDC1-205ENST00000477763 ORM2P19652 201 aa2.02□□□□□ -2.09
SMNDC1-205ENST00000477763 CDK2P24941 298 aa2.02□□□□□ -2.09
SMNDC1-205ENST00000477763 GABARAPL2P60520 117 aa2.02□□□□□ -2.09
SMNDC1-205ENST00000477763 CAV1Q03135 178 aa2.02□□□□□ -2.09
SMNDC1-205ENST00000477763 FABP9Q0Z7S8 132 aa2.02□□□□□ -2.09
SMNDC1-205ENST00000477763 SURF2Q15527 256 aaPredicted RBP2.02□□□□□ -2.09
SMNDC1-205ENST00000477763 C12orf74Q32Q52 190 aa2.02□□□□□ -2.09
SMNDC1-205ENST00000477763 PLPPR5Q32ZL2 321 aa2.02□□□□□ -2.09
SMNDC1-205ENST00000477763 SAMD13Q5VXD3 122 aa2.02□□□□□ -2.09
SMNDC1-205ENST00000477763 EBLN2Q6P2I7 272 aa2.02□□□□□ -2.09
SMNDC1-205ENST00000477763 GDPD1Q8N9F7 314 aa2.02□□□□□ -2.09
SMNDC1-205ENST00000477763 OR2T27Q8NH04 317 aa2.02□□□□□ -2.09
SMNDC1-205ENST00000477763 OR4K13Q8NH42 304 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms