RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 DIO3P55073 304 aa4.95□□□□□ -1.62
SMARCE1-208ENST00000474246 CX3CL1P78423 397 aa4.95□□□□□ -1.62
SMARCE1-208ENST00000474246 CRADDP78560 199 aa4.95□□□□□ -1.62
SMARCE1-208ENST00000474246 SLC38A11Q08AI6 406 aa4.95□□□□□ -1.62
SMARCE1-208ENST00000474246 LGALSLQ3ZCW2 172 aaPredicted RBP4.95□□□□□ -1.62
SMARCE1-208ENST00000474246 TMEM150AQ86TG1 271 aa4.95□□□□□ -1.62
SMARCE1-208ENST00000474246 FTMTQ8N4E7 242 aa4.95□□□□□ -1.62
SMARCE1-208ENST00000474246 TEX29Q8N6K0 151 aa4.95□□□□□ -1.62
SMARCE1-208ENST00000474246 OR8B12Q8NGG6 310 aa4.95□□□□□ -1.62
SMARCE1-208ENST00000474246 TMEM125Q96AQ2 219 aa4.95□□□□□ -1.62
SMARCE1-208ENST00000474246 STARD4Q96DR4 205 aa4.95□□□□□ -1.62
SMARCE1-208ENST00000474246 SFXN3Q9BWM7 321 aa4.95□□□□□ -1.62
SMARCE1-208ENST00000474246 PARP11Q9NR21 331 aa4.95□□□□□ -1.62
SMARCE1-208ENST00000474246 RPRMQ9NS64 109 aa4.95□□□□□ -1.62
SMARCE1-208ENST00000474246 ZNF443Q9Y2A4 671 aaPredicted RBP4.95□□□□□ -1.62
SMARCE1-208ENST00000474246 INSIG2Q9Y5U4 225 aa4.95□□□□□ -1.62
SMARCE1-208ENST00000474246 ZNF106Q9H2Y7 1883 aaKnown RBP4.95□□□□□ -1.62
SMARCE1-208ENST00000474246 TTC3P53804 2025 aa4.95□□□□□ -1.62
SMARCE1-208ENST00000474246 MYH1P12882 1939 aa4.95□□□□□ -1.62
SMARCE1-208ENST00000474246 TRAV26-2A0A0B4J265 109 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 FAM183AA6NL82 134 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 PRR32B1ATL7 298 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 B4DXG7 233 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 REM1O75628 298 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 IGHG2P01859 326 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 IGHMP01871 453 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 KIR2DS2P43631 304 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 NUDT2P50583 147 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 RBM11P57052 281 aaKnown RBP4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 AKR1C1Q04828 323 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 CATR1Q13166 79 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 IL15RAQ13261 267 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 KIAA0040Q15053 153 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 ZNF726P1Q15940 193 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 GAGE13Q4V321 117 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 TECRLQ5HYJ1 363 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 OR4C11Q6IEV9 310 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 DNAJC24Q6P3W2 148 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 LRRTM1Q86UE6 522 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 ZNF429Q86V71 674 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 TMEM183AQ8IXX5 376 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 OR2A12Q8NGT7 310 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 NT5CQ8TCD5 201 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 SLC25A46Q96AG3 418 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 ELSPBP1Q96BH3 223 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 RBMXL1Q96E39 390 aaKnown RBP4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 AP1S3Q96PC3 154 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 PITX2Q99697 317 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 NAA38Q9BRA0 125 aaKnown RBP4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 OR51E2Q9H255 320 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 EDA2RQ9HAV5 297 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 CA10Q9NS85 328 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 RNF7Q9UBF6 113 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 SLC2A6Q9UGQ3 507 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 ORC6Q9Y5N6 252 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 A0A1W2PP11 408 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 GGT3PA6NGU5 568 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 SHISA9B4DS77 424 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 GGTLC3B5MD39 225 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 ZNF670-ZNF695F2Z2N8 137 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 CCDC179H3BU77 68 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 FCN1O00602 326 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 OVOL1O14753 267 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 DPM2O94777 84 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 SLC2A10O95528 541 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 SMIM10L2AP0DMW4 78 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 SMIM10L2BP0DMW5 78 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 PRDX1Q06830 199 aaKnown RBP4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 KIR3DS1Q14943 382 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 ALG10Q5BKT4 473 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 Q5XG85 94 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 SLC35E4Q6ICL7 350 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 UFSP1Q6NVU6 142 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 SBSNQ6UWP8 590 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 C11orf53Q8IXP5 236 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 CIARTQ8N365 385 aaPredicted RBP4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 Q8N3U1 123 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 RNF175Q8N4F7 328 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 OR5AK2Q8NH90 309 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 PLA2G12BQ9BX93 195 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 MRPL32Q9BYC8 188 aaKnown RBP4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 TCEAL2Q9H3H9 227 aaPredicted RBP4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 FKBP11Q9NYL4 201 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 UQCR10Q9UDW1 63 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 ENPP4Q9Y6X5 453 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 ACANP16112 2415 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 MYH2Q9UKX2 1941 aa4.94□□□□□ -1.62
SMARCE1-208ENST00000474246 C2orf16Q68DN1 1984 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 LAMA4Q16363 1823 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 A0A1W2PP18 115 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 C5orf63A6NC05 138 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 H3BQ15 152 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 WNT1P04628 370 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 TAS2R46P59540 309 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 BTG1P62324 171 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 CFHR3Q02985 330 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 MMDQ15546 238 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 MIDNQ504T8 468 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 TMEM255AQ5JRV8 349 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 COA6Q5JTJ3 125 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms