RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 HSPG2P98160 4391 aa4.98□□□□□ -1.61
HDAC1-204ENST00000471488 DNAH11Q96DT5 4516 aa4.98□□□□□ -1.61
HDAC1-204ENST00000471488 IGLV11-55A0A075B6I3 123 aa4.98□□□□□ -1.61
HDAC1-204ENST00000471488 ELOA3CA0A087WX78 387 aaPredicted RBP4.98□□□□□ -1.61
HDAC1-204ENST00000471488 TRBV6-6A0A0A6YYG2 114 aa4.98□□□□□ -1.61
HDAC1-204ENST00000471488 IGHV3-66A0A0C4DH42 116 aa4.98□□□□□ -1.61
HDAC1-204ENST00000471488 C15orf61A6NNL5 157 aa4.98□□□□□ -1.61
HDAC1-204ENST00000471488 CYB5BO43169 146 aa4.98□□□□□ -1.61
HDAC1-204ENST00000471488 AMBPP02760 352 aa4.98□□□□□ -1.61
HDAC1-204ENST00000471488 MIFP14174 115 aa4.98□□□□□ -1.61
HDAC1-204ENST00000471488 GABRB1P18505 474 aa4.98□□□□□ -1.61
HDAC1-204ENST00000471488 NPY1RP25929 384 aa4.98□□□□□ -1.61
HDAC1-204ENST00000471488 DCKP27707 260 aa4.98□□□□□ -1.61
HDAC1-204ENST00000471488 ARFRP1Q13795 201 aa4.98□□□□□ -1.61
HDAC1-204ENST00000471488 TTC23Q5W5X9 447 aa4.98□□□□□ -1.61
HDAC1-204ENST00000471488 Q6ZRM9 215 aa4.98□□□□□ -1.61
HDAC1-204ENST00000471488 CBR4Q8N4T8 237 aa4.98□□□□□ -1.61
HDAC1-204ENST00000471488 TMEM116Q8NCL8 245 aa4.98□□□□□ -1.61
HDAC1-204ENST00000471488 OR4S2Q8NH73 311 aa4.98□□□□□ -1.61
HDAC1-204ENST00000471488 RHOXF1Q8NHV9 184 aa4.98□□□□□ -1.61
HDAC1-204ENST00000471488 VSTM2AQ8TAG5 236 aa4.98□□□□□ -1.61
HDAC1-204ENST00000471488 ZNF502Q8TBZ5 544 aa4.98□□□□□ -1.61
HDAC1-204ENST00000471488 PGLYRP3Q96LB9 341 aa4.98□□□□□ -1.61
HDAC1-204ENST00000471488 RHPN1-AS1Q9BWJ2 59 aa4.98□□□□□ -1.61
HDAC1-204ENST00000471488 TM2D1Q9BX74 207 aa4.98□□□□□ -1.61
HDAC1-204ENST00000471488 ZNF436Q9C0F3 470 aaPredicted RBP4.98□□□□□ -1.61
HDAC1-204ENST00000471488 LPAR5Q9H1C0 372 aa4.98□□□□□ -1.61
HDAC1-204ENST00000471488 HRH4Q9H3N8 390 aa4.98□□□□□ -1.61
HDAC1-204ENST00000471488 FGF20Q9NP95 211 aaPredicted RBP4.98□□□□□ -1.61
HDAC1-204ENST00000471488 LOC100130705A0A1B0GUX0 176 aa4.97□□□□□ -1.61
HDAC1-204ENST00000471488 A0A1B0GW64 132 aa4.97□□□□□ -1.61
HDAC1-204ENST00000471488 F8W735 103 aaPredicted RBP4.97□□□□□ -1.61
HDAC1-204ENST00000471488 NDUFA4O00483 81 aa4.97□□□□□ -1.61
HDAC1-204ENST00000471488 MYL12BO14950 172 aa4.97□□□□□ -1.61
HDAC1-204ENST00000471488 ST8SIA3O43173 380 aa4.97□□□□□ -1.61
HDAC1-204ENST00000471488 TNFSF12O43508 249 aa4.97□□□□□ -1.61
HDAC1-204ENST00000471488 CIB2O75838 187 aa4.97□□□□□ -1.61
HDAC1-204ENST00000471488 BPNT1O95861 308 aa4.97□□□□□ -1.61
HDAC1-204ENST00000471488 CRYGCP07315 174 aa4.97□□□□□ -1.61
HDAC1-204ENST00000471488 ZNF735P0CB33 412 aa4.97□□□□□ -1.61
HDAC1-204ENST00000471488 CD36P16671 472 aa4.97□□□□□ -1.61
HDAC1-204ENST00000471488 HLA-GP17693 338 aa4.97□□□□□ -1.61
HDAC1-204ENST00000471488 TALDO1P37837 337 aa4.97□□□□□ -1.61
HDAC1-204ENST00000471488 CLDN12P56749 244 aa4.97□□□□□ -1.61
HDAC1-204ENST00000471488 RPL30P62888 115 aaKnown RBP4.97□□□□□ -1.61
HDAC1-204ENST00000471488 RPL8P62917 257 aaKnown RBP4.97□□□□□ -1.61
HDAC1-204ENST00000471488 C12orf74Q32Q52 190 aa4.97□□□□□ -1.61
HDAC1-204ENST00000471488 TCF24Q7RTU0 167 aa4.97□□□□□ -1.61
HDAC1-204ENST00000471488 TMEM80Q96HE8 168 aa4.97□□□□□ -1.61
HDAC1-204ENST00000471488 GPHA2Q96T91 129 aa4.97□□□□□ -1.61
HDAC1-204ENST00000471488 ATG101Q9BSB4 218 aa4.97□□□□□ -1.61
HDAC1-204ENST00000471488 TAS2R8Q9NYW2 309 aa4.97□□□□□ -1.61
HDAC1-204ENST00000471488 SMPXQ9UHP9 88 aa4.97□□□□□ -1.61
HDAC1-204ENST00000471488 TBC1D24Q9ULP9 559 aa4.97□□□□□ -1.61
HDAC1-204ENST00000471488 IGHV3OR16-12A0A075B7B8 117 aa4.96□□□□□ -1.62
HDAC1-204ENST00000471488 TRBV6-7A0A0A0MS04 114 aa4.96□□□□□ -1.62
HDAC1-204ENST00000471488 IGHV7-4-1A0A0J9YVY3 117 aa4.96□□□□□ -1.62
HDAC1-204ENST00000471488 IRGMA1A4Y4 181 aa4.96□□□□□ -1.62
HDAC1-204ENST00000471488 KNCNA6PVL3 124 aa4.96□□□□□ -1.62
HDAC1-204ENST00000471488 TMEM14DPA8MWL7 114 aa4.96□□□□□ -1.62
HDAC1-204ENST00000471488 EPM2AB3EWF7 344 aa4.96□□□□□ -1.62
HDAC1-204ENST00000471488 CHEK1O14757 476 aa4.96□□□□□ -1.62
HDAC1-204ENST00000471488 NUPL2O15504 423 aaKnown RBP4.96□□□□□ -1.62
HDAC1-204ENST00000471488 FCGR3AP08637 254 aa4.96□□□□□ -1.62
HDAC1-204ENST00000471488 INAFM2P0DMQ5 153 aa4.96□□□□□ -1.62
HDAC1-204ENST00000471488 GNB3P16520 340 aa4.96□□□□□ -1.62
HDAC1-204ENST00000471488 NAT1P18440 290 aa4.96□□□□□ -1.62
HDAC1-204ENST00000471488 NFYAP23511 347 aaPredicted RBP4.96□□□□□ -1.62
HDAC1-204ENST00000471488 PTBP1P26599 531 aaKnown RBP eCLIP4.96□□□□□ -1.62
HDAC1-204ENST00000471488 MAS1LP35410 378 aa4.96□□□□□ -1.62
HDAC1-204ENST00000471488 TAS2R43P59537 309 aa4.96□□□□□ -1.62
HDAC1-204ENST00000471488 RAB11BQ15907 218 aa4.96□□□□□ -1.62
HDAC1-204ENST00000471488 ACSM3Q53FZ2 586 aa4.96□□□□□ -1.62
HDAC1-204ENST00000471488 HSD17B12Q53GQ0 312 aa4.96□□□□□ -1.62
HDAC1-204ENST00000471488 SPATA12Q7Z6I5 190 aa4.96□□□□□ -1.62
HDAC1-204ENST00000471488 MFSD4AQ8N468 514 aa4.96□□□□□ -1.62
HDAC1-204ENST00000471488 ZNF555Q8NEP9 628 aa4.96□□□□□ -1.62
HDAC1-204ENST00000471488 OR10W1Q8NGF6 305 aa4.96□□□□□ -1.62
HDAC1-204ENST00000471488 TMEM167AQ8TBQ9 72 aa4.96□□□□□ -1.62
HDAC1-204ENST00000471488 APH1BQ8WW43 257 aa4.96□□□□□ -1.62
HDAC1-204ENST00000471488 SLC7A6OSQ96CW6 309 aaPredicted RBP4.96□□□□□ -1.62
HDAC1-204ENST00000471488 BSCL2Q96G97 398 aaPredicted RBP4.96□□□□□ -1.62
HDAC1-204ENST00000471488 COMMD5Q9GZQ3 224 aa4.96□□□□□ -1.62
HDAC1-204ENST00000471488 TMEM14BQ9NUH8 114 aa4.96□□□□□ -1.62
HDAC1-204ENST00000471488 C21orf62Q9NYP8 219 aa4.96□□□□□ -1.62
HDAC1-204ENST00000471488 HSF4Q9ULV5 492 aa4.96□□□□□ -1.62
HDAC1-204ENST00000471488 DIMT1Q9UNQ2 313 aaKnown RBP4.96□□□□□ -1.62
HDAC1-204ENST00000471488 TMED3Q9Y3Q3 217 aa4.96□□□□□ -1.62
HDAC1-204ENST00000471488 ETV7Q9Y603 341 aa4.96□□□□□ -1.62
HDAC1-204ENST00000471488 TRAV14DV4A0A0A6YYC5 116 aa4.95□□□□□ -1.62
HDAC1-204ENST00000471488 DENRO43583 198 aaKnown RBP4.95□□□□□ -1.62
HDAC1-204ENST00000471488 HRASP01112 189 aa4.95□□□□□ -1.62
HDAC1-204ENST00000471488 IGHV3-48P01763 117 aa4.95□□□□□ -1.62
HDAC1-204ENST00000471488 OR13C7P0DN81 318 aa4.95□□□□□ -1.62
HDAC1-204ENST00000471488 C4BPBP20851 252 aa4.95□□□□□ -1.62
HDAC1-204ENST00000471488 TMEM50BP56557 158 aa4.95□□□□□ -1.62
HDAC1-204ENST00000471488 PLAC9Q5JTB6 97 aa4.95□□□□□ -1.62
HDAC1-204ENST00000471488 ACTL10Q5JWF8 245 aa4.95□□□□□ -1.62
HDAC1-204ENST00000471488 C1orf100Q5SVJ3 147 aa4.95□□□□□ -1.62
HDAC1-204ENST00000471488 LIPKQ5VXJ0 399 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 1124.5 ms