RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 FAM25AB3EWG3 89 aa7.76□□□□□ -1.17
SF3A3-204ENST00000462258 FAM25CB3EWG5 89 aa7.76□□□□□ -1.17
SF3A3-204ENST00000462258 FAM25GB3EWG6 89 aa7.76□□□□□ -1.17
SF3A3-204ENST00000462258 PPP5D1E7EU14 171 aa7.76□□□□□ -1.17
SF3A3-204ENST00000462258 GPR31O00270 319 aa7.76□□□□□ -1.17
SF3A3-204ENST00000462258 UPK2O00526 184 aa7.76□□□□□ -1.17
SF3A3-204ENST00000462258 REG1AP05451 166 aa7.76□□□□□ -1.17
SF3A3-204ENST00000462258 CRYGCP07315 174 aa7.76□□□□□ -1.17
SF3A3-204ENST00000462258 CTRB1P17538 263 aa7.76□□□□□ -1.17
SF3A3-204ENST00000462258 PSMB6P28072 239 aa7.76□□□□□ -1.17
SF3A3-204ENST00000462258 OR2B8PP59922 312 aa7.76□□□□□ -1.17
SF3A3-204ENST00000462258 ERVK-16P61578 105 aa7.76□□□□□ -1.17
SF3A3-204ENST00000462258 TATDN3Q17R31 274 aa7.76□□□□□ -1.17
SF3A3-204ENST00000462258 RNASE12Q5GAN4 147 aaKnown RBP7.76□□□□□ -1.17
SF3A3-204ENST00000462258 FAM209BQ5JX69 171 aa7.76□□□□□ -1.17
SF3A3-204ENST00000462258 GPR107Q5VW38 600 aa7.76□□□□□ -1.17
SF3A3-204ENST00000462258 CTRB2Q6GPI1 263 aa7.76□□□□□ -1.17
SF3A3-204ENST00000462258 MZT2AQ6P582 158 aa7.76□□□□□ -1.17
SF3A3-204ENST00000462258 DHRS11Q6UWP2 260 aa7.76□□□□□ -1.17
SF3A3-204ENST00000462258 CMTM1Q8IZ96 169 aa7.76□□□□□ -1.17
SF3A3-204ENST00000462258 OR6F1Q8NGZ6 308 aa7.76□□□□□ -1.17
SF3A3-204ENST00000462258 WWC2-AS2Q96NR7 200 aa7.76□□□□□ -1.17
SF3A3-204ENST00000462258 COMMD5Q9GZQ3 224 aa7.76□□□□□ -1.17
SF3A3-204ENST00000462258 PEMTQ9UBM1 199 aa7.76□□□□□ -1.17
SF3A3-204ENST00000462258 FBXL7Q9UJT9 491 aa7.76□□□□□ -1.17
SF3A3-204ENST00000462258 U3KQK5 164 aa7.76□□□□□ -1.17
SF3A3-204ENST00000462258 TRAV3A0A0B4J244 114 aa7.75□□□□□ -1.17
SF3A3-204ENST00000462258 PGLYRP1O75594 196 aaPredicted RBP7.75□□□□□ -1.17
SF3A3-204ENST00000462258 IGHV3-23P01764 117 aa7.75□□□□□ -1.17
SF3A3-204ENST00000462258 CSN3P07498 182 aa7.75□□□□□ -1.17
SF3A3-204ENST00000462258 FGF2P09038 288 aa7.75□□□□□ -1.17
SF3A3-204ENST00000462258 FRMD6-AS1P0C7T7 363 aa7.75□□□□□ -1.17
SF3A3-204ENST00000462258 DEFA4P12838 97 aa7.75□□□□□ -1.17
SF3A3-204ENST00000462258 RPA2P15927 270 aa7.75□□□□□ -1.17
SF3A3-204ENST00000462258 F2RP25116 425 aa7.75□□□□□ -1.17
SF3A3-204ENST00000462258 TSPAN5P62079 268 aa7.75□□□□□ -1.17
SF3A3-204ENST00000462258 PHLDA2Q53GA4 152 aa7.75□□□□□ -1.17
SF3A3-204ENST00000462258 IL34Q6ZMJ4 242 aa7.75□□□□□ -1.17
SF3A3-204ENST00000462258 GPR141Q7Z602 305 aa7.75□□□□□ -1.17
SF3A3-204ENST00000462258 LYSMD2Q8IV50 215 aa7.75□□□□□ -1.17
SF3A3-204ENST00000462258 CCDC140Q96MF4 163 aa7.75□□□□□ -1.17
SF3A3-204ENST00000462258 FANCD2OSQ96PS1 177 aa7.75□□□□□ -1.17
SF3A3-204ENST00000462258 QTRT1Q9BXR0 403 aaKnown RBP7.75□□□□□ -1.17
SF3A3-204ENST00000462258 SIGLEC8Q9NYZ4 499 aa7.75□□□□□ -1.17
SF3A3-204ENST00000462258 EXTL2Q9UBQ6 330 aa7.75□□□□□ -1.17
SF3A3-204ENST00000462258 TENM3Q9P273 2699 aa7.74□□□□□ -1.17
SF3A3-204ENST00000462258 IGLV11-55A0A075B6I3 123 aa7.74□□□□□ -1.17
SF3A3-204ENST00000462258 IGLC7A0M8Q6 106 aa7.74□□□□□ -1.17
SF3A3-204ENST00000462258 MFSD2BA6NFX1 497 aa7.74□□□□□ -1.17
SF3A3-204ENST00000462258 H0Y980 276 aa7.74□□□□□ -1.17
SF3A3-204ENST00000462258 NDUFB8O95169 186 aa7.74□□□□□ -1.17
SF3A3-204ENST00000462258 HIST1H1BP16401 226 aaKnown RBP7.74□□□□□ -1.17
SF3A3-204ENST00000462258 ZNF182P17025 639 aaPredicted RBP7.74□□□□□ -1.17
SF3A3-204ENST00000462258 S100GP29377 79 aa7.74□□□□□ -1.17
SF3A3-204ENST00000462258 THOC7Q6I9Y2 204 aaKnown RBP7.74□□□□□ -1.17
SF3A3-204ENST00000462258 LCN12Q6JVE5 192 aa7.74□□□□□ -1.17
SF3A3-204ENST00000462258 SGPP2Q8IWX5 399 aa7.74□□□□□ -1.17
SF3A3-204ENST00000462258 Q8N402 240 aa7.74□□□□□ -1.17
SF3A3-204ENST00000462258 FCAMRQ8WWV6 532 aa7.74□□□□□ -1.17
SF3A3-204ENST00000462258 EEF1AKMT3Q96AZ1 226 aa7.74□□□□□ -1.17
SF3A3-204ENST00000462258 DGCR14Q96DF8 476 aaKnown RBP7.74□□□□□ -1.17
SF3A3-204ENST00000462258 SRSF8Q9BRL6 282 aaKnown RBP7.74□□□□□ -1.17
SF3A3-204ENST00000462258 S4R3C0 116 aa7.74□□□□□ -1.17
SF3A3-204ENST00000462258 DNAH7Q8WXX0 4024 aa7.73□□□□□ -1.17
SF3A3-204ENST00000462258 M0QYG6 137 aa7.73□□□□□ -1.17
SF3A3-204ENST00000462258 GGCTO75223 188 aaKnown RBP7.73□□□□□ -1.17
SF3A3-204ENST00000462258 KRASP01116 189 aa7.73□□□□□ -1.17
SF3A3-204ENST00000462258 HLA-AP01891 365 aaKnown RBP7.73□□□□□ -1.17
SF3A3-204ENST00000462258 IGHV4-30-4P0DP06 118 aa7.73□□□□□ -1.17
SF3A3-204ENST00000462258 G6PCP35575 357 aa7.73□□□□□ -1.17
SF3A3-204ENST00000462258 ARL3P36405 182 aa7.73□□□□□ -1.17
SF3A3-204ENST00000462258 LPAR6P43657 344 aa7.73□□□□□ -1.17
SF3A3-204ENST00000462258 ALDH3B2P48448 385 aa7.73□□□□□ -1.17
SF3A3-204ENST00000462258 KLK9Q2XQG4 91 aa7.73□□□□□ -1.17
SF3A3-204ENST00000462258 LPCAT3Q6P1A2 487 aa7.73□□□□□ -1.17
SF3A3-204ENST00000462258 CLEC19AQ6UXS0 136 aa7.73□□□□□ -1.17
SF3A3-204ENST00000462258 SBSPONQ8IVN8 264 aa7.73□□□□□ -1.17
SF3A3-204ENST00000462258 SLC38A6Q8IZM9 456 aa7.73□□□□□ -1.17
SF3A3-204ENST00000462258 GDPD1Q8N9F7 314 aa7.73□□□□□ -1.17
SF3A3-204ENST00000462258 DYNLRB2Q8TF09 96 aa7.73□□□□□ -1.17
SF3A3-204ENST00000462258 KLK9Q9UKQ9 250 aa7.73□□□□□ -1.17
SF3A3-204ENST00000462258 DMRT1Q9Y5R6 373 aa7.73□□□□□ -1.17
SF3A3-204ENST00000462258 RYR3Q15413 4870 aa7.72□□□□□ -1.17
SF3A3-204ENST00000462258 IZUMO1RA6ND01 250 aa7.72□□□□□ -1.17
SF3A3-204ENST00000462258 CYB5BO43169 146 aa7.72□□□□□ -1.17
SF3A3-204ENST00000462258 TRAPPC2P0DI81 140 aa7.72□□□□□ -1.17
SF3A3-204ENST00000462258 TRAPPC2BP0DI82 140 aa7.72□□□□□ -1.17
SF3A3-204ENST00000462258 GPR183P32249 361 aa7.72□□□□□ -1.17
SF3A3-204ENST00000462258 UCP3P55916 312 aa7.72□□□□□ -1.17
SF3A3-204ENST00000462258 WT1-ASQ06250 92 aa7.72□□□□□ -1.17
SF3A3-204ENST00000462258 ZNF585BQ52M93 769 aa7.72□□□□□ -1.17
SF3A3-204ENST00000462258 RNASE10Q5GAN6 216 aaKnown RBP7.72□□□□□ -1.17
SF3A3-204ENST00000462258 HSD17B13Q7Z5P4 300 aaPredicted RBP7.72□□□□□ -1.17
SF3A3-204ENST00000462258 TBC1D26Q86UD7 250 aa7.72□□□□□ -1.17
SF3A3-204ENST00000462258 GTSCR1Q86UQ5 136 aa7.72□□□□□ -1.17
SF3A3-204ENST00000462258 LAX1Q8IWV1 398 aa7.72□□□□□ -1.17
SF3A3-204ENST00000462258 Q8N1Y9 231 aa7.72□□□□□ -1.17
SF3A3-204ENST00000462258 OR10W1Q8NGF6 305 aa7.72□□□□□ -1.17
SF3A3-204ENST00000462258 OR1L8Q8NGR8 309 aa7.72□□□□□ -1.17
SF3A3-204ENST00000462258 OR2K2Q8NGT1 345 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms