RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 AUP1Q9Y679 476 aa9.92□□□□□ -0.82
SMARCAD1-204ENST00000457823 ABLIM2Q6H8Q1 611 aa9.91□□□□□ -0.82
SMARCAD1-204ENST00000457823 C1orf162Q8NEQ5 155 aaPredicted RBP9.91□□□□□ -0.82
SMARCAD1-204ENST00000457823 TRAV30A0A087WSZ9 112 aa9.91□□□□□ -0.82
SMARCAD1-204ENST00000457823 IL4P05112 153 aa9.91□□□□□ -0.82
SMARCAD1-204ENST00000457823 MST1P26927 711 aa9.91□□□□□ -0.82
SMARCAD1-204ENST00000457823 BSPH1Q075Z2 132 aa9.91□□□□□ -0.82
SMARCAD1-204ENST00000457823 PSMG3Q9BT73 122 aaPredicted RBP9.91□□□□□ -0.82
SMARCAD1-204ENST00000457823 CBY1Q9Y3M2 126 aa9.91□□□□□ -0.82
SMARCAD1-204ENST00000457823 FAM208BQ5VWN6 2430 aa9.91□□□□□ -0.82
SMARCAD1-204ENST00000457823 ZNF407Q9C0G0 2248 aa9.91□□□□□ -0.82
SMARCAD1-204ENST00000457823 NPIPB11E5RHQ5 1161 aa9.91□□□□□ -0.82
SMARCAD1-204ENST00000457823 SS18L1O75177 396 aaPredicted RBP9.91□□□□□ -0.82
SMARCAD1-204ENST00000457823 PKIAP61925 76 aa9.91□□□□□ -0.82
SMARCAD1-204ENST00000457823 C1QTNF12Q5T7M4 302 aa9.91□□□□□ -0.82
SMARCAD1-204ENST00000457823 FBXL15Q9H469 300 aa9.91□□□□□ -0.82
SMARCAD1-204ENST00000457823 CD99P14209 185 aa9.91□□□□□ -0.82
SMARCAD1-204ENST00000457823 BTF3P20290 206 aaKnown RBP9.91□□□□□ -0.82
SMARCAD1-204ENST00000457823 LAMTOR1Q6IAA8 161 aa9.91□□□□□ -0.82
SMARCAD1-204ENST00000457823 MRPS18CQ9Y3D5 142 aaKnown RBP9.91□□□□□ -0.82
SMARCAD1-204ENST00000457823 IGKV3D-15A0A087WSY6 115 aa9.9□□□□□ -0.82
SMARCAD1-204ENST00000457823 IGKV3-15P01624 115 aa9.9□□□□□ -0.82
SMARCAD1-204ENST00000457823 GCHFRP30047 84 aa9.9□□□□□ -0.82
SMARCAD1-204ENST00000457823 GOLT1AQ6ZVE7 132 aa9.9□□□□□ -0.82
SMARCAD1-204ENST00000457823 OSR1Q8TAX0 266 aaPredicted RBP9.9□□□□□ -0.82
SMARCAD1-204ENST00000457823 C19orf24Q9BVV8 132 aa9.9□□□□□ -0.82
SMARCAD1-204ENST00000457823 SSBP3Q9BWW4 388 aaPredicted RBP9.9□□□□□ -0.82
SMARCAD1-204ENST00000457823 MRPL18Q9H0U6 180 aaKnown RBP9.9□□□□□ -0.82
SMARCAD1-204ENST00000457823 DPM3Q9P2X0 92 aa9.9□□□□□ -0.82
SMARCAD1-204ENST00000457823 DOCK4Q8N1I0 1966 aa9.9□□□□□ -0.82
SMARCAD1-204ENST00000457823 RBBP6Q7Z6E9 1792 aaKnown RBP9.9□□□□□ -0.82
SMARCAD1-204ENST00000457823 NMUP48645 174 aa9.9□□□□□ -0.82
SMARCAD1-204ENST00000457823 FAM106AQ4KMX7 169 aa9.9□□□□□ -0.82
SMARCAD1-204ENST00000457823 ZCCHC24Q8N2G6 241 aaKnown RBP9.9□□□□□ -0.82
SMARCAD1-204ENST00000457823 ZNF502Q8TBZ5 544 aa9.9□□□□□ -0.82
SMARCAD1-204ENST00000457823 PIMREGQ9BSJ6 248 aa9.9□□□□□ -0.82
SMARCAD1-204ENST00000457823 C5orf52A6NGY3 159 aa9.9□□□□□ -0.83
SMARCAD1-204ENST00000457823 TMEM250H0YL14 139 aa9.9□□□□□ -0.83
SMARCAD1-204ENST00000457823 EFNA2O43921 213 aa9.9□□□□□ -0.83
SMARCAD1-204ENST00000457823 FAM57AQ8TBR7 257 aa9.9□□□□□ -0.83
SMARCAD1-204ENST00000457823 NEU1Q99519 415 aa9.9□□□□□ -0.83
SMARCAD1-204ENST00000457823 FOXD3Q9UJU5 478 aaPredicted RBP9.9□□□□□ -0.83
SMARCAD1-204ENST00000457823 KBTBD11-OT1A0A1B0GTJ5 212 aa9.89□□□□□ -0.83
SMARCAD1-204ENST00000457823 ATP5IP56385 69 aaPredicted RBP9.89□□□□□ -0.83
SMARCAD1-204ENST00000457823 C2orf83Q53S99 150 aa9.89□□□□□ -0.83
SMARCAD1-204ENST00000457823 S4R3C0 116 aa9.89□□□□□ -0.83
SMARCAD1-204ENST00000457823 PTPRQQ9UMZ3 2332 aa9.89□□□□□ -0.83
SMARCAD1-204ENST00000457823 ZFHX2Q9C0A1 2572 aaPredicted RBP9.89□□□□□ -0.83
SMARCAD1-204ENST00000457823 PQLC2LA1A4F0 135 aa9.89□□□□□ -0.83
SMARCAD1-204ENST00000457823 RNF222A6NCQ9 220 aa9.89□□□□□ -0.83
SMARCAD1-204ENST00000457823 CXorf65A6NEN9 183 aa9.89□□□□□ -0.83
SMARCAD1-204ENST00000457823 FOXH1O75593 365 aa9.89□□□□□ -0.83
SMARCAD1-204ENST00000457823 NPPCP23582 126 aa9.89□□□□□ -0.83
SMARCAD1-204ENST00000457823 SMUG1Q53HV7 270 aa9.89□□□□□ -0.83
SMARCAD1-204ENST00000457823 OR10S1Q8NGN2 331 aa9.89□□□□□ -0.83
SMARCAD1-204ENST00000457823 SPG11Q96JI7 2443 aa9.89□□□□□ -0.83
SMARCAD1-204ENST00000457823 TP53BP1Q12888 1972 aaPredicted RBP9.89□□□□□ -0.83
SMARCAD1-204ENST00000457823 IGHV3OR16-12A0A075B7B8 117 aa9.89□□□□□ -0.83
SMARCAD1-204ENST00000457823 IGLV3-32A0A0A0MS00 114 aa9.89□□□□□ -0.83
SMARCAD1-204ENST00000457823 LYRM7Q5U5X0 104 aa9.89□□□□□ -0.83
SMARCAD1-204ENST00000457823 OR4A47Q6IF82 309 aa9.89□□□□□ -0.83
SMARCAD1-204ENST00000457823 OR1P1Q8NH06 330 aa9.89□□□□□ -0.83
SMARCAD1-204ENST00000457823 PLPPR1Q8TBJ4 325 aa9.89□□□□□ -0.83
SMARCAD1-204ENST00000457823 DDB2Q92466 427 aa9.89□□□□□ -0.83
SMARCAD1-204ENST00000457823 SRIP30626 198 aa9.89□□□□□ -0.83
SMARCAD1-204ENST00000457823 PDLIM4P50479 330 aa9.89□□□□□ -0.83
SMARCAD1-204ENST00000457823 NPCDR1Q9BY65 106 aa9.89□□□□□ -0.83
SMARCAD1-204ENST00000457823 IGHV3-49A0A0A0MS15 119 aa9.88□□□□□ -0.83
SMARCAD1-204ENST00000457823 IQCF6A8MYZ5 107 aa9.88□□□□□ -0.83
SMARCAD1-204ENST00000457823 LEPROTL1O95214 131 aa9.88□□□□□ -0.83
SMARCAD1-204ENST00000457823 IL6RP08887 468 aaPredicted RBP9.88□□□□□ -0.83
SMARCAD1-204ENST00000457823 CA7P43166 264 aa9.88□□□□□ -0.83
SMARCAD1-204ENST00000457823 LINC00305Q7Z4B0 112 aa9.88□□□□□ -0.83
SMARCAD1-204ENST00000457823 LYZL4Q96KX0 146 aa9.88□□□□□ -0.83
SMARCAD1-204ENST00000457823 IGKV1D-13A0A0B4J2D9 117 aa9.88□□□□□ -0.83
SMARCAD1-204ENST00000457823 PINLYPA6NC86 204 aa9.88□□□□□ -0.83
SMARCAD1-204ENST00000457823 OR4C46A6NHA9 309 aa9.88□□□□□ -0.83
SMARCAD1-204ENST00000457823 C17orf100A8MU93 164 aa9.88□□□□□ -0.83
SMARCAD1-204ENST00000457823 M0QZK8 103 aa9.88□□□□□ -0.83
SMARCAD1-204ENST00000457823 M0R3E3 92 aa9.88□□□□□ -0.83
SMARCAD1-204ENST00000457823 GGCTO75223 188 aaKnown RBP9.88□□□□□ -0.83
SMARCAD1-204ENST00000457823 IGKV1-13P0DP09 117 aa9.88□□□□□ -0.83
SMARCAD1-204ENST00000457823 ZNF25P17030 456 aaPredicted RBP9.88□□□□□ -0.83
SMARCAD1-204ENST00000457823 FOXG1P55316 489 aaPredicted RBP9.88□□□□□ -0.83
SMARCAD1-204ENST00000457823 ATP5G2Q06055 141 aa9.88□□□□□ -0.83
SMARCAD1-204ENST00000457823 PAQR4Q8N4S7 273 aaPredicted RBP9.88□□□□□ -0.83
SMARCAD1-204ENST00000457823 HIST1H2BAQ96A08 127 aa9.88□□□□□ -0.83
SMARCAD1-204ENST00000457823 ELOVL1Q9BW60 279 aa9.88□□□□□ -0.83
SMARCAD1-204ENST00000457823 CDC42EP3Q9UKI2 254 aa9.88□□□□□ -0.83
SMARCAD1-204ENST00000457823 ZFP30Q9Y2G7 519 aa9.88□□□□□ -0.83
SMARCAD1-204ENST00000457823 PHF3Q92576 2039 aaKnown RBP9.88□□□□□ -0.83
SMARCAD1-204ENST00000457823 NBEAP1P0C6P0 100 aa9.88□□□□□ -0.83
SMARCAD1-204ENST00000457823 BTCP35070 178 aa9.88□□□□□ -0.83
SMARCAD1-204ENST00000457823 FGFBP3Q8TAT2 258 aa9.88□□□□□ -0.83
SMARCAD1-204ENST00000457823 IFI27L2Q9H2X8 130 aa9.88□□□□□ -0.83
SMARCAD1-204ENST00000457823 PHLDA3Q9Y5J5 127 aa9.88□□□□□ -0.83
SMARCAD1-204ENST00000457823 J3QRE1 110 aa9.87□□□□□ -0.83
SMARCAD1-204ENST00000457823 HAX1O00165 279 aa9.87□□□□□ -0.83
SMARCAD1-204ENST00000457823 CRXO43186 299 aaPredicted RBP9.87□□□□□ -0.83
SMARCAD1-204ENST00000457823 GCGP01275 180 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms