RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 TSPAN11A1L157 253 aa4.11□□□□□ -1.75
EPHA3-202ENST00000452448 RIIAD1A6NNX1 92 aa4.11□□□□□ -1.75
EPHA3-202ENST00000452448 ZAR1LA6NP61 321 aa4.11□□□□□ -1.75
EPHA3-202ENST00000452448 GGTLC3B5MD39 225 aa4.11□□□□□ -1.75
EPHA3-202ENST00000452448 FAM72CH0Y354 149 aa4.11□□□□□ -1.75
EPHA3-202ENST00000452448 TMEM250H0YL14 139 aa4.11□□□□□ -1.75
EPHA3-202ENST00000452448 CXCL13O43927 109 aa4.11□□□□□ -1.75
EPHA3-202ENST00000452448 NDUFB6O95139 128 aa4.11□□□□□ -1.75
EPHA3-202ENST00000452448 WISP3O95389 354 aaPredicted RBP4.11□□□□□ -1.75
EPHA3-202ENST00000452448 GATA2P23769 480 aaPredicted RBP4.11□□□□□ -1.75
EPHA3-202ENST00000452448 LMO2P25791 158 aa4.11□□□□□ -1.75
EPHA3-202ENST00000452448 INSL3P51460 131 aa4.11□□□□□ -1.75
EPHA3-202ENST00000452448 Q0VG73 95 aa4.11□□□□□ -1.75
EPHA3-202ENST00000452448 FOXI1Q12951 378 aa4.11□□□□□ -1.75
EPHA3-202ENST00000452448 ETDBQ3ZM63 59 aa4.11□□□□□ -1.75
EPHA3-202ENST00000452448 FAM72AQ5TYM5 149 aa4.11□□□□□ -1.75
EPHA3-202ENST00000452448 FAM72DQ6L9T8 149 aa4.11□□□□□ -1.75
EPHA3-202ENST00000452448 TEPPQ6URK8 271 aa4.11□□□□□ -1.75
EPHA3-202ENST00000452448 TMEM64Q6YI46 380 aa4.11□□□□□ -1.75
EPHA3-202ENST00000452448 FAM72BQ86X60 149 aa4.11□□□□□ -1.75
EPHA3-202ENST00000452448 OR4C16Q8NGL9 310 aa4.11□□□□□ -1.75
EPHA3-202ENST00000452448 ZNF501Q96CX3 271 aaPredicted RBP4.11□□□□□ -1.75
EPHA3-202ENST00000452448 GNPNAT1Q96EK6 184 aaPredicted RBP4.11□□□□□ -1.75
EPHA3-202ENST00000452448 SCGB3A2Q96PL1 93 aa4.11□□□□□ -1.75
EPHA3-202ENST00000452448 PYGO2Q9BRQ0 406 aa4.11□□□□□ -1.75
EPHA3-202ENST00000452448 RPP25Q9BUL9 199 aaKnown RBP4.11□□□□□ -1.75
EPHA3-202ENST00000452448 SDR39U1Q9NRG7 319 aaPredicted RBP4.11□□□□□ -1.75
EPHA3-202ENST00000452448 Q9UF83 564 aa4.11□□□□□ -1.75
EPHA3-202ENST00000452448 FZD1Q9UP38 647 aa4.11□□□□□ -1.75
EPHA3-202ENST00000452448 NOP16Q9Y3C1 178 aaKnown RBP4.11□□□□□ -1.75
EPHA3-202ENST00000452448 PLXNA1Q9UIW2 1896 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 SDCBPO00560 298 aaPredicted RBP4.1□□□□□ -1.75
EPHA3-202ENST00000452448 SOD1P00441 154 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 LINC00869P0C866 280 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 KLK2P20151 261 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 GALR1P47211 349 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 TAS2R46P59540 309 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 FUT5Q11128 374 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 WFDC2Q14508 124 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 MSMO1Q15800 293 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 PMCHL1Q16048 86 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 PLK5Q496M5 336 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 CD164L2Q6UWJ8 174 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 IGFL2Q6UWQ7 119 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 SSX8Q7RTT4 187 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 SH2D6Q7Z4S9 175 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 HSD11B1LQ7Z5J1 315 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 MOB3BQ86TA1 216 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 PIANPQ8IYJ0 282 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 C10orf126Q8N4M7 172 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 RAB42Q8N4Z0 105 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 GCSAMQ8N6F7 178 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 NEUROG1Q92886 237 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 ADOQ96SZ5 270 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 C7orf69Q9H7B7 122 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 PLEKHF2Q9H8W4 249 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 RPRMQ9NS64 109 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 CISD1Q9NZ45 108 aaKnown RBP4.1□□□□□ -1.75
EPHA3-202ENST00000452448 PROCRQ9UNN8 238 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 ZNF257Q9Y2Q1 563 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 FIS1Q9Y3D6 152 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 TRAV9-2A0A087WT02 112 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 C15orf61A6NNL5 157 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 J3QQQ9 107 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 GLI4P10075 376 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 VDAC1P21796 283 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 KIR2DS2P43631 304 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 WDR5P61964 334 aaKnown RBP4.1□□□□□ -1.75
EPHA3-202ENST00000452448 HLA-DRB3P79483 266 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 PMAIP1Q13794 54 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 SP6Q3SY56 376 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 FAM27D1Q5T7N8 215 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 C9orf153Q5TBE3 101 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 Q6Q795 121 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 Q71RC1 249 aaPredicted RBP4.1□□□□□ -1.75
EPHA3-202ENST00000452448 DTWD1Q8N5C7 304 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 RNF128Q8TEB7 428 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 PPP1R1CQ8WVI7 109 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 MANBALQ9NQG1 85 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 DLL3Q9NYJ7 618 aa4.1□□□□□ -1.75
EPHA3-202ENST00000452448 NUP205Q92621 2012 aa4.09□□□□□ -1.75
EPHA3-202ENST00000452448 DPRXA6NFQ7 191 aa4.09□□□□□ -1.75
EPHA3-202ENST00000452448 OOSP1A8MZH6 123 aa4.09□□□□□ -1.75
EPHA3-202ENST00000452448 ZNF253O75346 499 aa4.09□□□□□ -1.75
EPHA3-202ENST00000452448 IGLV3-25P01717 112 aa4.09□□□□□ -1.75
EPHA3-202ENST00000452448 HLA-DQA2P01906 255 aa4.09□□□□□ -1.75
EPHA3-202ENST00000452448 SLC25A5P05141 298 aaKnown RBP4.09□□□□□ -1.75
EPHA3-202ENST00000452448 IL3P08700 152 aa4.09□□□□□ -1.75
EPHA3-202ENST00000452448 PIPP12273 146 aaPredicted RBP4.09□□□□□ -1.75
EPHA3-202ENST00000452448 NMUP48645 174 aa4.09□□□□□ -1.75
EPHA3-202ENST00000452448 HILS1P60008 231 aa4.09□□□□□ -1.75
EPHA3-202ENST00000452448 LTBQ06643 244 aa4.09□□□□□ -1.75
EPHA3-202ENST00000452448 IHHQ14623 411 aa4.09□□□□□ -1.75
EPHA3-202ENST00000452448 IGFBP7Q16270 282 aa4.09□□□□□ -1.75
EPHA3-202ENST00000452448 ZNF718Q3SXZ3 478 aa4.09□□□□□ -1.75
EPHA3-202ENST00000452448 STPG3Q8N7X2 389 aa4.09□□□□□ -1.75
EPHA3-202ENST00000452448 SIGLECL1Q8N7X8 197 aa4.09□□□□□ -1.75
EPHA3-202ENST00000452448 ZNF114Q8NC26 417 aa4.09□□□□□ -1.75
EPHA3-202ENST00000452448 OR4K13Q8NH42 304 aa4.09□□□□□ -1.75
EPHA3-202ENST00000452448 SMIM4Q8WVI0 70 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms