RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 LYG1Q8N1E2 194 aa8.75□□□□□ -1.01
PKP4-206ENST00000452162 OR10P1Q8NGE3 313 aa8.75□□□□□ -1.01
PKP4-206ENST00000452162 PINX1Q96BK5 328 aaKnown RBP8.75□□□□□ -1.01
PKP4-206ENST00000452162 ADTRPQ96IZ2 230 aa8.75□□□□□ -1.01
PKP4-206ENST00000452162 TMEM106BQ9NUM4 274 aa8.75□□□□□ -1.01
PKP4-206ENST00000452162 TMEM140Q9NV12 185 aa8.75□□□□□ -1.01
PKP4-206ENST00000452162 PPIAL4AQ9Y536 164 aa8.75□□□□□ -1.01
PKP4-206ENST00000452162 TRAV3A0A0B4J244 114 aa8.75□□□□□ -1.01
PKP4-206ENST00000452162 SCAF4O95104 1147 aaKnown RBP8.75□□□□□ -1.01
PKP4-206ENST00000452162 LY86O95711 162 aa8.75□□□□□ -1.01
PKP4-206ENST00000452162 MDKP21741 143 aaPredicted RBP8.75□□□□□ -1.01
PKP4-206ENST00000452162 RAB2AP61019 212 aa8.75□□□□□ -1.01
PKP4-206ENST00000452162 HAGHQ16775 308 aa8.75□□□□□ -1.01
PKP4-206ENST00000452162 OR10A7Q8NGE5 316 aa8.75□□□□□ -1.01
PKP4-206ENST00000452162 OR4A16Q8NH70 328 aa8.75□□□□□ -1.01
PKP4-206ENST00000452162 RCC1LQ96I51 464 aaKnown RBP8.75□□□□□ -1.01
PKP4-206ENST00000452162 MS4A5Q9H3V2 200 aa8.75□□□□□ -1.01
PKP4-206ENST00000452162 IFNA17P01571 189 aa8.74□□□□□ -1.01
PKP4-206ENST00000452162 SRP19P09132 144 aaKnown RBP8.74□□□□□ -1.01
PKP4-206ENST00000452162 OR13C7P0DN81 318 aa8.74□□□□□ -1.01
PKP4-206ENST00000452162 VDAC2P45880 294 aaPredicted RBP8.74□□□□□ -1.01
PKP4-206ENST00000452162 EFNA4P52798 201 aa8.74□□□□□ -1.01
PKP4-206ENST00000452162 RPS16P62249 146 aaKnown RBP8.74□□□□□ -1.01
PKP4-206ENST00000452162 AWAT1Q58HT5 328 aa8.74□□□□□ -1.01
PKP4-206ENST00000452162 ETV3LQ6ZN32 361 aa8.74□□□□□ -1.01
PKP4-206ENST00000452162 CCL17Q92583 94 aa8.74□□□□□ -1.01
PKP4-206ENST00000452162 RAB1BQ9H0U4 201 aa8.74□□□□□ -1.01
PKP4-206ENST00000452162 CSPG4Q6UVK1 2322 aa8.73□□□□□ -1.01
PKP4-206ENST00000452162 LOC102723971A0A1B0GUV8 181 aa8.73□□□□□ -1.01
PKP4-206ENST00000452162 HSPB1P04792 205 aaKnown RBP8.73□□□□□ -1.01
PKP4-206ENST00000452162 RPL31P62899 125 aaKnown RBP8.73□□□□□ -1.01
PKP4-206ENST00000452162 POU2AF1Q16633 256 aa8.73□□□□□ -1.01
PKP4-206ENST00000452162 PRSS57Q6UWY2 283 aa8.73□□□□□ -1.01
PKP4-206ENST00000452162 SPNS3Q6ZMD2 512 aa8.73□□□□□ -1.01
PKP4-206ENST00000452162 ZNF429Q86V71 674 aa8.73□□□□□ -1.01
PKP4-206ENST00000452162 Q96MF0 132 aa8.73□□□□□ -1.01
PKP4-206ENST00000452162 GAL3ST2Q9H3Q3 398 aa8.73□□□□□ -1.01
PKP4-206ENST00000452162 TLN2Q9Y4G6 2542 aa8.73□□□□□ -1.01
PKP4-206ENST00000452162 C15orf61A6NNL5 157 aa8.73□□□□□ -1.01
PKP4-206ENST00000452162 PRSS47A8MTI9 375 aa8.73□□□□□ -1.01
PKP4-206ENST00000452162 IGKV1D-33P01593 117 aa8.73□□□□□ -1.01
PKP4-206ENST00000452162 IGKV1-33P01594 117 aa8.73□□□□□ -1.01
PKP4-206ENST00000452162 FGF7P21781 194 aa8.73□□□□□ -1.01
PKP4-206ENST00000452162 ELLP55199 621 aaPredicted RBP8.73□□□□□ -1.01
PKP4-206ENST00000452162 CLEC12BQ2HXU8 276 aa8.73□□□□□ -1.01
PKP4-206ENST00000452162 ANKRD39Q53RE8 183 aa8.73□□□□□ -1.01
PKP4-206ENST00000452162 KHDC3LQ587J8 217 aa8.73□□□□□ -1.01
PKP4-206ENST00000452162 SOHLH1Q5JUK2 328 aa8.73□□□□□ -1.01
PKP4-206ENST00000452162 ACSM6Q6P461 480 aa8.73□□□□□ -1.01
PKP4-206ENST00000452162 LYPD2Q6UXB3 125 aa8.73□□□□□ -1.01
PKP4-206ENST00000452162 HEPN1Q6WQI6 88 aa8.73□□□□□ -1.01
PKP4-206ENST00000452162 ZNRD1Q9P1U0 126 aa8.73□□□□□ -1.01
PKP4-206ENST00000452162 CR1P17927 2039 aa8.73□□□□□ -1.01
PKP4-206ENST00000452162 C7orf77A4D0Y5 90 aa8.72□□□□□ -1.01
PKP4-206ENST00000452162 LYNX1G3V0Z9 82 aa8.72□□□□□ -1.01
PKP4-206ENST00000452162 CT45A6P0DMU7 189 aa8.72□□□□□ -1.01
PKP4-206ENST00000452162 CT45A5P0DMU8 189 aa8.72□□□□□ -1.01
PKP4-206ENST00000452162 CT45A7P0DMV0 189 aa8.72□□□□□ -1.01
PKP4-206ENST00000452162 LYNX1P0DP58 116 aa8.72□□□□□ -1.01
PKP4-206ENST00000452162 DAOP14920 347 aa8.72□□□□□ -1.01
PKP4-206ENST00000452162 CCL3L1P16619 93 aa8.72□□□□□ -1.01
PKP4-206ENST00000452162 ERVFRD-1P60508 538 aa8.72□□□□□ -1.01
PKP4-206ENST00000452162 TMEM200BQ69YZ2 307 aa8.72□□□□□ -1.01
PKP4-206ENST00000452162 OR4A47Q6IF82 309 aa8.72□□□□□ -1.01
PKP4-206ENST00000452162 RXFP4Q8TDU9 374 aa8.72□□□□□ -1.01
PKP4-206ENST00000452162 RHOVQ96L33 236 aa8.72□□□□□ -1.01
PKP4-206ENST00000452162 ZNF714Q96N38 554 aa8.72□□□□□ -1.01
PKP4-206ENST00000452162 SMCO4Q9NRQ5 59 aa8.72□□□□□ -1.01
PKP4-206ENST00000452162 CTSZQ9UBR2 303 aa8.72□□□□□ -1.01
PKP4-206ENST00000452162 FOXA2Q9Y261 457 aaPredicted RBP8.72□□□□□ -1.01
PKP4-206ENST00000452162 YLPM1P49750 1951 aaKnown RBP8.72□□□□□ -1.01
PKP4-206ENST00000452162 IL6RP08887 468 aaPredicted RBP8.72□□□□□ -1.01
PKP4-206ENST00000452162 PAX6P26367 422 aa8.72□□□□□ -1.01
PKP4-206ENST00000452162 LCN15Q6UWW0 184 aa8.72□□□□□ -1.01
PKP4-206ENST00000452162 ZNF833PQ6ZTB9 187 aa8.72□□□□□ -1.01
PKP4-206ENST00000452162 RPP25LQ8N5L8 163 aaKnown RBP8.72□□□□□ -1.01
PKP4-206ENST00000452162 NEU4Q8WWR8 484 aaPredicted RBP8.72□□□□□ -1.01
PKP4-206ENST00000452162 NPCDR1Q9BY65 106 aa8.72□□□□□ -1.01
PKP4-206ENST00000452162 RPS10P5Q9NQ39 176 aa8.72□□□□□ -1.01
PKP4-206ENST00000452162 TMEM14BQ9NUH8 114 aa8.72□□□□□ -1.01
PKP4-206ENST00000452162 KAAG1Q9UBP8 84 aa8.72□□□□□ -1.01
PKP4-206ENST00000452162 TCF19Q9Y242 345 aa8.72□□□□□ -1.01
PKP4-206ENST00000452162 TET2Q6N021 2002 aaPredicted RBP8.71□□□□□ -1.01
PKP4-206ENST00000452162 ABCA1O95477 2261 aa8.71□□□□□ -1.01
PKP4-206ENST00000452162 MAP1LC3B2A6NCE7 125 aa8.71□□□□□ -1.01
PKP4-206ENST00000452162 PRSS46E5RG02 174 aa8.71□□□□□ -1.01
PKP4-206ENST00000452162 M0R036 132 aa8.71□□□□□ -1.01
PKP4-206ENST00000452162 NDUFB3O43676 98 aa8.71□□□□□ -1.01
PKP4-206ENST00000452162 SNRNP70P08621 437 aaKnown RBP8.71□□□□□ -1.01
PKP4-206ENST00000452162 AKR1C3P42330 323 aa8.71□□□□□ -1.01
PKP4-206ENST00000452162 RPP30P78346 268 aaKnown RBP8.71□□□□□ -1.01
PKP4-206ENST00000452162 AKIRIN2Q53H80 203 aa8.71□□□□□ -1.01
PKP4-206ENST00000452162 LRRC10Q5BKY1 277 aa8.71□□□□□ -1.01
PKP4-206ENST00000452162 Q8N7P7 452 aa8.71□□□□□ -1.01
PKP4-206ENST00000452162 OR10G4Q8NGN3 311 aa8.71□□□□□ -1.01
PKP4-206ENST00000452162 TMEM170AQ8WVE7 144 aa8.71□□□□□ -1.01
PKP4-206ENST00000452162 CLCC1Q96S66 551 aa8.71□□□□□ -1.01
PKP4-206ENST00000452162 MAP1LC3BQ9GZQ8 125 aa8.71□□□□□ -1.01
PKP4-206ENST00000452162 UNKLQ9H9P5 680 aaKnown RBP8.71□□□□□ -1.01
PKP4-206ENST00000452162 HEYLQ9NQ87 328 aaPredicted RBP8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms