RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 C10orf91Q5T1B1 145 aa13.97□□□□□ -0.17
TCOF1-206ENST00000445265 OR8B3Q8NGG8 313 aa13.97□□□□□ -0.17
TCOF1-206ENST00000445265 OR8B2Q96RD0 313 aa13.97□□□□□ -0.17
TCOF1-206ENST00000445265 ZNF71Q9NQZ8 489 aaPredicted RBP13.97□□□□□ -0.17
TCOF1-206ENST00000445265 EP300Q09472 2414 aaPredicted RBP13.97□□□□□ -0.17
TCOF1-206ENST00000445265 C9JQL5 133 aa13.97□□□□□ -0.17
TCOF1-206ENST00000445265 GNB2P62879 340 aa13.97□□□□□ -0.17
TCOF1-206ENST00000445265 OR4C13Q8NGP0 309 aa13.97□□□□□ -0.17
TCOF1-206ENST00000445265 GSX1Q9H4S2 264 aaPredicted RBP13.97□□□□□ -0.17
TCOF1-206ENST00000445265 VSIRQ9H7M9 311 aa13.97□□□□□ -0.17
TCOF1-206ENST00000445265 HIGD1AQ9Y241 93 aa13.97□□□□□ -0.17
TCOF1-206ENST00000445265 RPL11P62913 178 aaKnown RBP13.96□□□□□ -0.17
TCOF1-206ENST00000445265 RBFOX2O43251 390 aaKnown RBP eCLIP13.96□□□□□ -0.17
TCOF1-206ENST00000445265 YPEL1O60688 119 aa13.96□□□□□ -0.17
TCOF1-206ENST00000445265 WDR82Q6UXN9 313 aa13.96□□□□□ -0.17
TCOF1-206ENST00000445265 YPEL2Q96QA6 119 aa13.96□□□□□ -0.17
TCOF1-206ENST00000445265 ALPK3Q96L96 1907 aa13.96□□□□□ -0.17
TCOF1-206ENST00000445265 FAM90A27PA6NNH2 459 aa13.96□□□□□ -0.18
TCOF1-206ENST00000445265 CXCL1P09341 107 aa13.96□□□□□ -0.18
TCOF1-206ENST00000445265 RND2P52198 227 aa13.96□□□□□ -0.18
TCOF1-206ENST00000445265 NUBP1P53384 320 aa13.96□□□□□ -0.18
TCOF1-206ENST00000445265 CENPWQ5EE01 88 aa13.96□□□□□ -0.18
TCOF1-206ENST00000445265 OR4A47Q6IF82 309 aa13.96□□□□□ -0.18
TCOF1-206ENST00000445265 SLC31A2O15432 143 aa13.96□□□□□ -0.18
TCOF1-206ENST00000445265 NDUFA2O43678 99 aa13.96□□□□□ -0.18
TCOF1-206ENST00000445265 IGKV1-5P01602 117 aa13.96□□□□□ -0.18
TCOF1-206ENST00000445265 AMY1AP04745 511 aa13.96□□□□□ -0.18
TCOF1-206ENST00000445265 OR4C5Q8NGB2 326 aa13.96□□□□□ -0.18
TCOF1-206ENST00000445265 TMEM170AQ8WVE7 144 aa13.96□□□□□ -0.18
TCOF1-206ENST00000445265 WDR83OSQ9Y284 106 aa13.96□□□□□ -0.18
TCOF1-206ENST00000445265 TRAV9-1A0A075B6T8 112 aa13.95□□□□□ -0.18
TCOF1-206ENST00000445265 CD99P14209 185 aa13.95□□□□□ -0.18
TCOF1-206ENST00000445265 FOXC1Q12948 553 aa13.95□□□□□ -0.18
TCOF1-206ENST00000445265 TNFRSF19Q9NS68 423 aa13.95□□□□□ -0.18
TCOF1-206ENST00000445265 IL36BQ9NZH7 164 aa13.95□□□□□ -0.18
TCOF1-206ENST00000445265 GRIFINA4D1Z8 144 aa13.95□□□□□ -0.18
TCOF1-206ENST00000445265 CSN3P07498 182 aa13.95□□□□□ -0.18
TCOF1-206ENST00000445265 CBLN1P23435 193 aa13.95□□□□□ -0.18
TCOF1-206ENST00000445265 NHLH1Q02575 133 aa13.95□□□□□ -0.18
TCOF1-206ENST00000445265 COL5A1-AS1Q5SY13 56 aa13.95□□□□□ -0.18
TCOF1-206ENST00000445265 COLCA1Q6ZS62 124 aa13.95□□□□□ -0.18
TCOF1-206ENST00000445265 NHLRC2Q8NBF2 726 aa13.95□□□□□ -0.18
TCOF1-206ENST00000445265 OSR1Q8TAX0 266 aaPredicted RBP13.95□□□□□ -0.18
TCOF1-206ENST00000445265 TMEM186Q96B77 213 aa13.95□□□□□ -0.18
TCOF1-206ENST00000445265 MAP1LC3CQ9BXW4 147 aa13.95□□□□□ -0.18
TCOF1-206ENST00000445265 RFNGQ9Y644 331 aa13.95□□□□□ -0.18
TCOF1-206ENST00000445265 KBTBD11-OT1A0A1B0GTJ5 212 aa13.94□□□□□ -0.18
TCOF1-206ENST00000445265 TEX50A0A1B0GTY4 177 aa13.94□□□□□ -0.18
TCOF1-206ENST00000445265 OR4A8P0C604 315 aa13.94□□□□□ -0.18
TCOF1-206ENST00000445265 ESPL1Q14674 2120 aa13.94□□□□□ -0.18
TCOF1-206ENST00000445265 FXYD3Q14802 87 aa13.94□□□□□ -0.18
TCOF1-206ENST00000445265 IGLV3-1P01715 115 aa13.94□□□□□ -0.18
TCOF1-206ENST00000445265 ZNF596Q8TC21 504 aa13.94□□□□□ -0.18
TCOF1-206ENST00000445265 PGPA6NDG6 321 aa13.94□□□□□ -0.18
TCOF1-206ENST00000445265 RRHO14718 337 aa13.94□□□□□ -0.18
TCOF1-206ENST00000445265 TM4SF5O14894 197 aa13.94□□□□□ -0.18
TCOF1-206ENST00000445265 OR5AL1P0C617 328 aa13.94□□□□□ -0.18
TCOF1-206ENST00000445265 TMEM14EPQ6UXP3 125 aa13.94□□□□□ -0.18
TCOF1-206ENST00000445265 SCO2A0A1W2PP80 73 aa13.94□□□□□ -0.18
TCOF1-206ENST00000445265 NPIPB11E5RHQ5 1161 aa13.94□□□□□ -0.18
TCOF1-206ENST00000445265 IL15RAQ13261 267 aa13.94□□□□□ -0.18
TCOF1-206ENST00000445265 RNF151Q2KHN1 245 aa13.94□□□□□ -0.18
TCOF1-206ENST00000445265 WFIKKN1Q96NZ8 548 aa13.94□□□□□ -0.18
TCOF1-206ENST00000445265 FAM90A9PA6NNJ1 464 aa13.93□□□□□ -0.18
TCOF1-206ENST00000445265 SLC25A17O43808 307 aa13.93□□□□□ -0.18
TCOF1-206ENST00000445265 RSPO1Q2MKA7 263 aaPredicted RBP13.93□□□□□ -0.18
TCOF1-206ENST00000445265 GPR179Q6PRD1 2367 aa13.93□□□□□ -0.18
TCOF1-206ENST00000445265 KIAA2026Q5HYC2 2103 aa13.93□□□□□ -0.18
TCOF1-206ENST00000445265 APELAP0DMC3 54 aa13.93□□□□□ -0.18
TCOF1-206ENST00000445265 MMDQ15546 238 aa13.93□□□□□ -0.18
TCOF1-206ENST00000445265 PMCHL1Q16048 86 aa13.93□□□□□ -0.18
TCOF1-206ENST00000445265 C5orf24Q7Z6I8 188 aa13.93□□□□□ -0.18
TCOF1-206ENST00000445265 OR51G1Q8NGK1 321 aa13.93□□□□□ -0.18
TCOF1-206ENST00000445265 IGFBP2P18065 325 aa13.93□□□□□ -0.18
TCOF1-206ENST00000445265 COMPP49747 757 aaPredicted RBP13.93□□□□□ -0.18
TCOF1-206ENST00000445265 PTTG1IPP53801 180 aa13.93□□□□□ -0.18
TCOF1-206ENST00000445265 ERVFRD-1P60508 538 aa13.93□□□□□ -0.18
TCOF1-206ENST00000445265 HERPUD1Q15011 391 aa13.93□□□□□ -0.18
TCOF1-206ENST00000445265 MORN2Q502X0 79 aa13.93□□□□□ -0.18
TCOF1-206ENST00000445265 C9orf106Q8NAJ2 232 aa13.93□□□□□ -0.18
TCOF1-206ENST00000445265 IL18BPO95998 194 aa13.93□□□□□ -0.18
TCOF1-206ENST00000445265 PLAUP00749 431 aa13.93□□□□□ -0.18
TCOF1-206ENST00000445265 SRIP30626 198 aa13.93□□□□□ -0.18
TCOF1-206ENST00000445265 RPP25LQ8N5L8 163 aaKnown RBP13.93□□□□□ -0.18
TCOF1-206ENST00000445265 OR9G1Q8NH87 305 aa13.93□□□□□ -0.18
TCOF1-206ENST00000445265 FAM122AQ96E09 287 aa13.93□□□□□ -0.18
TCOF1-206ENST00000445265 SCNM1Q9BWG6 230 aa13.93□□□□□ -0.18
TCOF1-206ENST00000445265 IFI27L2Q9H2X8 130 aa13.93□□□□□ -0.18
TCOF1-206ENST00000445265 CGAP01215 116 aa13.92□□□□□ -0.18
TCOF1-206ENST00000445265 DUTP33316 252 aaKnown RBP13.92□□□□□ -0.18
TCOF1-206ENST00000445265 CA7P43166 264 aa13.92□□□□□ -0.18
TCOF1-206ENST00000445265 ACSF3Q4G176 576 aaPredicted RBP13.92□□□□□ -0.18
TCOF1-206ENST00000445265 HCP5Q6MZN7 132 aa13.92□□□□□ -0.18
TCOF1-206ENST00000445265 LYPD6Q86Y78 171 aa13.92□□□□□ -0.18
TCOF1-206ENST00000445265 DOLPP1Q86YN1 238 aa13.92□□□□□ -0.18
TCOF1-206ENST00000445265 FAM222BQ8WU58 562 aa13.92□□□□□ -0.18
TCOF1-206ENST00000445265 HSPB8Q9UJY1 196 aa13.92□□□□□ -0.18
TCOF1-206ENST00000445265 LGALS7P47929 136 aa13.92□□□□□ -0.18
TCOF1-206ENST00000445265 SPSB3Q6PJ21 355 aa13.92□□□□□ -0.18
TCOF1-206ENST00000445265 HIST3H2BBQ8N257 126 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms