RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 SAA2-SAA4A0A096LPE2 208 aa14.02□□□□□ -0.17
PMS1-213ENST00000441310 RBMXL2O75526 392 aaKnown RBP14.02□□□□□ -0.17
PMS1-213ENST00000441310 CLDN14O95500 239 aa14.02□□□□□ -0.17
PMS1-213ENST00000441310 RPL31P62899 125 aaKnown RBP14.02□□□□□ -0.17
PMS1-213ENST00000441310 CEACAM16Q2WEN9 425 aa14.02□□□□□ -0.17
PMS1-213ENST00000441310 HES3Q5TGS1 186 aa14.02□□□□□ -0.17
PMS1-213ENST00000441310 FOXL2NBQ6ZUU3 175 aa14.02□□□□□ -0.17
PMS1-213ENST00000441310 GJE1A6NN92 205 aa14.01□□□□□ -0.17
PMS1-213ENST00000441310 SYNGR3O43761 229 aa14.01□□□□□ -0.17
PMS1-213ENST00000441310 OR52L2PQ8NGH6 319 aa14.01□□□□□ -0.17
PMS1-213ENST00000441310 MUC21A0A0G2JKD1 596 aa14.01□□□□□ -0.17
PMS1-213ENST00000441310 MUC21A0A140T8X8 626 aa14.01□□□□□ -0.17
PMS1-213ENST00000441310 hCG_38984A0A1B0GV85 526 aa14.01□□□□□ -0.17
PMS1-213ENST00000441310 BMPR1BO00238 502 aa14.01□□□□□ -0.17
PMS1-213ENST00000441310 IGLV2-14P01704 120 aa14.01□□□□□ -0.17
PMS1-213ENST00000441310 ZNF32P17041 273 aa14.01□□□□□ -0.17
PMS1-213ENST00000441310 G6PCP35575 357 aa14.01□□□□□ -0.17
PMS1-213ENST00000441310 MUC21Q5SSG8 566 aa14.01□□□□□ -0.17
PMS1-213ENST00000441310 TMEM136Q6ZRR5 245 aa14.01□□□□□ -0.17
PMS1-213ENST00000441310 MRPL27Q9P0M9 148 aaKnown RBP14.01□□□□□ -0.17
PMS1-213ENST00000441310 DSPP15924 2871 aaKnown RBP14.01□□□□□ -0.17
PMS1-213ENST00000441310 PIGBOS1A0A0B4J2F0 54 aa14□□□□□ -0.17
PMS1-213ENST00000441310 GPM6AP51674 278 aa14□□□□□ -0.17
PMS1-213ENST00000441310 TRIP6Q15654 476 aaKnown RBP14□□□□□ -0.17
PMS1-213ENST00000441310 LHFPL4Q7Z7J7 247 aa14□□□□□ -0.17
PMS1-213ENST00000441310 S100A7AQ86SG5 101 aa14□□□□□ -0.17
PMS1-213ENST00000441310 SARAFQ96BY9 339 aa14□□□□□ -0.17
PMS1-213ENST00000441310 SPRY4Q9C004 299 aa14□□□□□ -0.17
PMS1-213ENST00000441310 CRIM1Q9NZV1 1036 aa14□□□□□ -0.17
PMS1-213ENST00000441310 TRBV9A0A0B4J1U6 114 aa14□□□□□ -0.17
PMS1-213ENST00000441310 ZNF716A6NP11 495 aa14□□□□□ -0.17
PMS1-213ENST00000441310 PMS2P5A8MQ11 134 aa14□□□□□ -0.17
PMS1-213ENST00000441310 NEURL1O76050 574 aa14□□□□□ -0.17
PMS1-213ENST00000441310 ZNF883P0CG24 379 aa14□□□□□ -0.17
PMS1-213ENST00000441310 MAGEA5P43359 124 aa14□□□□□ -0.17
PMS1-213ENST00000441310 C16orf54Q6UWD8 224 aa14□□□□□ -0.17
PMS1-213ENST00000441310 ZNF439Q8NDP4 499 aa14□□□□□ -0.17
PMS1-213ENST00000441310 ZNF488Q96MN9 340 aa14□□□□□ -0.17
PMS1-213ENST00000441310 YTHDF2Q9Y5A9 579 aaKnown RBP14□□□□□ -0.17
PMS1-213ENST00000441310 PRR14LQ5THK1 2151 aa14□□□□□ -0.17
PMS1-213ENST00000441310 RRHO14718 337 aa14□□□□□ -0.17
PMS1-213ENST00000441310 GOSR1O95249 250 aa14□□□□□ -0.17
PMS1-213ENST00000441310 CELA3BP08861 270 aa14□□□□□ -0.17
PMS1-213ENST00000441310 ZNF816Q0VGE8 651 aaPredicted RBP14□□□□□ -0.17
PMS1-213ENST00000441310 EBLN2Q6P2I7 272 aa14□□□□□ -0.17
PMS1-213ENST00000441310 LIN7CQ9NUP9 197 aaKnown RBP14□□□□□ -0.17
PMS1-213ENST00000441310 V9GYV3 84 aa14□□□□□ -0.17
PMS1-213ENST00000441310 USF3Q68DE3 2245 aa13.99□□□□□ -0.17
PMS1-213ENST00000441310 A0A096LPE4 126 aa13.99□□□□□ -0.17
PMS1-213ENST00000441310 A0A1W2PPZ6 126 aa13.99□□□□□ -0.17
PMS1-213ENST00000441310 PSG9Q00887 426 aa13.99□□□□□ -0.17
PMS1-213ENST00000441310 RNASE7Q9H1E1 156 aaKnown RBP13.99□□□□□ -0.17
PMS1-213ENST00000441310 RAB29O14966 203 aa13.99□□□□□ -0.17
PMS1-213ENST00000441310 HSBP1O75506 76 aa13.99□□□□□ -0.17
PMS1-213ENST00000441310 CCNOP22674 350 aa13.99□□□□□ -0.17
PMS1-213ENST00000441310 CA7P43166 264 aa13.99□□□□□ -0.17
PMS1-213ENST00000441310 OR1C1Q15619 314 aa13.99□□□□□ -0.17
PMS1-213ENST00000441310 PLA2G2CQ5R387 149 aa13.99□□□□□ -0.17
PMS1-213ENST00000441310 LAMA5O15230 3695 aa13.99□□□□□ -0.17
PMS1-213ENST00000441310 FGF12P61328 243 aa13.98□□□□□ -0.17
PMS1-213ENST00000441310 TNXAQ16473 311 aa13.98□□□□□ -0.17
PMS1-213ENST00000441310 FAM27BQ5VT28 67 aa13.98□□□□□ -0.17
PMS1-213ENST00000441310 WDR73Q6P4I2 378 aa13.98□□□□□ -0.17
PMS1-213ENST00000441310 DOLPP1Q86YN1 238 aa13.98□□□□□ -0.17
PMS1-213ENST00000441310 OR2D2Q9H210 308 aa13.98□□□□□ -0.17
PMS1-213ENST00000441310 M0R2Z0 102 aa13.98□□□□□ -0.17
PMS1-213ENST00000441310 RAMP3O60896 148 aa13.98□□□□□ -0.17
PMS1-213ENST00000441310 MT-ND6P03923 174 aa13.98□□□□□ -0.17
PMS1-213ENST00000441310 FOXG1P55316 489 aaPredicted RBP13.98□□□□□ -0.17
PMS1-213ENST00000441310 RPS20P60866 119 aaKnown RBP13.98□□□□□ -0.17
PMS1-213ENST00000441310 SRSF7Q16629 238 aaKnown RBP eCLIP13.98□□□□□ -0.17
PMS1-213ENST00000441310 OR4P4Q8NGL7 312 aa13.98□□□□□ -0.17
PMS1-213ENST00000441310 EAF1Q96JC9 268 aaPredicted RBP13.98□□□□□ -0.17
PMS1-213ENST00000441310 GP6Q9HCN6 339 aa13.98□□□□□ -0.17
PMS1-213ENST00000441310 MTCH1Q9NZJ7 389 aa13.98□□□□□ -0.17
PMS1-213ENST00000441310 CORTO00230 105 aa13.98□□□□□ -0.17
PMS1-213ENST00000441310 NBEAP1P0C6P0 100 aa13.98□□□□□ -0.17
PMS1-213ENST00000441310 CCL2P13500 99 aa13.98□□□□□ -0.17
PMS1-213ENST00000441310 GATA2P23769 480 aaPredicted RBP13.97□□□□□ -0.17
PMS1-213ENST00000441310 PLGLB1Q02325 96 aa13.97□□□□□ -0.17
PMS1-213ENST00000441310 Q5PR19 223 aa13.97□□□□□ -0.17
PMS1-213ENST00000441310 FOXB1Q99853 325 aa13.97□□□□□ -0.17
PMS1-213ENST00000441310 TMEM38BQ9NVV0 291 aa13.97□□□□□ -0.17
PMS1-213ENST00000441310 BOKQ9UMX3 212 aaPredicted RBP13.97□□□□□ -0.17
PMS1-213ENST00000441310 ARL2-SNX15V9GYD0 113 aa13.97□□□□□ -0.17
PMS1-213ENST00000441310 TRAV8-6A0A0B4J262 113 aa13.97□□□□□ -0.17
PMS1-213ENST00000441310 FAM181BA6NEQ2 426 aa13.97□□□□□ -0.17
PMS1-213ENST00000441310 FAM90A26D6RGX4 464 aa13.97□□□□□ -0.17
PMS1-213ENST00000441310 H0YJW9 148 aa13.97□□□□□ -0.17
PMS1-213ENST00000441310 TRAPPC2LH3BP13 241 aa13.97□□□□□ -0.17
PMS1-213ENST00000441310 CLDN18P56856 261 aa13.97□□□□□ -0.17
PMS1-213ENST00000441310 RHOBP62745 196 aa13.97□□□□□ -0.17
PMS1-213ENST00000441310 BVES-AS1Q5T3Y7 98 aa13.97□□□□□ -0.17
PMS1-213ENST00000441310 SPATA12Q7Z6I5 190 aa13.97□□□□□ -0.17
PMS1-213ENST00000441310 KIR3DL3Q8N743 410 aa13.97□□□□□ -0.17
PMS1-213ENST00000441310 COL27A1Q8IZC6 1860 aaPredicted RBP13.97□□□□□ -0.17
PMS1-213ENST00000441310 M0R1X1 148 aa13.96□□□□□ -0.17
PMS1-213ENST00000441310 REG1AP05451 166 aa13.96□□□□□ -0.17
PMS1-213ENST00000441310 SSTR5P35346 364 aa13.96□□□□□ -0.17
PMS1-213ENST00000441310 SELENOVP59797 346 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms