RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 LRRC75BQ2VPJ9 315 aa6.76□□□□□ -1.33
HPS4-205ENST00000429411 ZNF718Q3SXZ3 478 aa6.76□□□□□ -1.33
HPS4-205ENST00000429411 VWA1Q6PCB0 445 aa6.76□□□□□ -1.33
HPS4-205ENST00000429411 Q8IYB0 196 aa6.76□□□□□ -1.33
HPS4-205ENST00000429411 SAXO1Q8IYX7 474 aa6.76□□□□□ -1.33
HPS4-205ENST00000429411 LYG1Q8N1E2 194 aa6.76□□□□□ -1.33
HPS4-205ENST00000429411 OR13A1Q8NGR1 328 aa6.76□□□□□ -1.33
HPS4-205ENST00000429411 LYPD6BQ8NI32 183 aa6.76□□□□□ -1.33
HPS4-205ENST00000429411 IL22RA2Q969J5 263 aa6.76□□□□□ -1.33
HPS4-205ENST00000429411 TMEM45BQ96B21 275 aa6.76□□□□□ -1.33
HPS4-205ENST00000429411 NEIL1Q96FI4 390 aaPredicted RBP6.76□□□□□ -1.33
HPS4-205ENST00000429411 FAM103A1Q9BTL3 118 aaKnown RBP6.76□□□□□ -1.33
HPS4-205ENST00000429411 SAMD10Q9BYL1 202 aa6.76□□□□□ -1.33
HPS4-205ENST00000429411 SMDT1Q9H4I9 107 aa6.76□□□□□ -1.33
HPS4-205ENST00000429411 ZNF430Q9H8G1 570 aaPredicted RBP6.76□□□□□ -1.33
HPS4-205ENST00000429411 RNF115Q9Y4L5 304 aa6.76□□□□□ -1.33
HPS4-205ENST00000429411 ZNF25P17030 456 aaPredicted RBP6.76□□□□□ -1.33
HPS4-205ENST00000429411 ATP5G3P48201 142 aa6.76□□□□□ -1.33
HPS4-205ENST00000429411 SERF2P84101 59 aa6.76□□□□□ -1.33
HPS4-205ENST00000429411 ZNF90Q03938 601 aa6.76□□□□□ -1.33
HPS4-205ENST00000429411 P2RY6Q15077 328 aa6.76□□□□□ -1.33
HPS4-205ENST00000429411 SMIM21Q3B7S5 101 aa6.76□□□□□ -1.33
HPS4-205ENST00000429411 ZNF585BQ52M93 769 aa6.76□□□□□ -1.33
HPS4-205ENST00000429411 RPL39P5Q59GN2 51 aa6.76□□□□□ -1.33
HPS4-205ENST00000429411 DNLZQ5SXM8 178 aa6.76□□□□□ -1.33
HPS4-205ENST00000429411 MIC13Q5XKP0 118 aa6.76□□□□□ -1.33
HPS4-205ENST00000429411 FAM90A2PQ658T7 463 aa6.76□□□□□ -1.33
HPS4-205ENST00000429411 LHFPL4Q7Z7J7 247 aa6.76□□□□□ -1.33
HPS4-205ENST00000429411 S1PR3Q99500 378 aa6.76□□□□□ -1.33
HPS4-205ENST00000429411 QTRT1Q9BXR0 403 aaKnown RBP6.76□□□□□ -1.33
HPS4-205ENST00000429411 SDF2L1Q9HCN8 221 aa6.76□□□□□ -1.33
HPS4-205ENST00000429411 CISD1Q9NZ45 108 aaKnown RBP6.76□□□□□ -1.33
HPS4-205ENST00000429411 USP9XQ93008 2570 aaPredicted RBP6.76□□□□□ -1.33
HPS4-205ENST00000429411 EXPH5Q8NEV8 1989 aa6.76□□□□□ -1.33
HPS4-205ENST00000429411 CTXND1A0A1B0GTU2 59 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 F6UZH7 168 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 ITGB1BP1O14713 200 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 OR7C2O60412 319 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 IGKV1D-33P01593 117 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 IGKV1-33P01594 117 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 IGHV2-5P01817 119 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 WT1P19544 449 aaPredicted RBP6.75□□□□□ -1.33
HPS4-205ENST00000429411 TCL1AP56279 114 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 ZNF705AQ6ZN79 300 aaPredicted RBP6.75□□□□□ -1.33
HPS4-205ENST00000429411 COLCA1Q6ZS62 124 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 WDR86Q86TI4 376 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 ABHD5Q8WTS1 349 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 LINC00470Q9BZP3 86 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 SPRR3Q9UBC9 169 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 TRAPPC1Q9Y5R8 145 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 GRIFINA4D1Z8 144 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 OOEPA6NGQ2 149 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 LRRC30A6NM36 301 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 H0Y8G0 127 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 IGHV3-48P01763 117 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 IGHV1-2P23083 117 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 HAPLN4Q86UW8 402 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 OR4X1Q8NH49 305 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 BCL2L2Q92843 193 aaPredicted RBP6.75□□□□□ -1.33
HPS4-205ENST00000429411 DERL1Q9BUN8 251 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 SCRT1Q9BWW7 348 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 ZDHHC11Q9H8X9 412 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 NCKAP5O14513 1909 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 KMT2EQ8IZD2 1858 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 CD33P20138 364 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 BAGE3Q86Y29 109 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 BAGE2Q86Y30 109 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 ZNF645Q8N7E2 425 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 RND1Q92730 232 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 PKIBQ9C010 78 aa6.75□□□□□ -1.33
HPS4-205ENST00000429411 CSPG4Q6UVK1 2322 aa6.74□□□□□ -1.33
HPS4-205ENST00000429411 B4DEV8 164 aa6.74□□□□□ -1.33
HPS4-205ENST00000429411 RPL23P62829 140 aaKnown RBP6.74□□□□□ -1.33
HPS4-205ENST00000429411 ZNF497Q6ZNH5 498 aa6.74□□□□□ -1.33
HPS4-205ENST00000429411 C19orf35Q6ZS72 473 aa6.74□□□□□ -1.33
HPS4-205ENST00000429411 ODF3L1Q8IXM7 274 aa6.74□□□□□ -1.33
HPS4-205ENST00000429411 SGMS2Q8NHU3 365 aa6.74□□□□□ -1.33
HPS4-205ENST00000429411 LSM10Q969L4 123 aaKnown RBP6.74□□□□□ -1.33
HPS4-205ENST00000429411 PERPQ96FX8 193 aa6.74□□□□□ -1.33
HPS4-205ENST00000429411 CIB3Q96Q77 187 aaPredicted RBP6.74□□□□□ -1.33
HPS4-205ENST00000429411 EGLN1Q9GZT9 426 aa6.74□□□□□ -1.33
HPS4-205ENST00000429411 TLN2Q9Y4G6 2542 aa6.74□□□□□ -1.33
HPS4-205ENST00000429411 IGKV3D-15A0A087WSY6 115 aa6.74□□□□□ -1.33
HPS4-205ENST00000429411 A0A1B0GUS0 222 aa6.74□□□□□ -1.33
HPS4-205ENST00000429411 WISP2O76076 250 aa6.74□□□□□ -1.33
HPS4-205ENST00000429411 APELAP0DMC3 54 aa6.74□□□□□ -1.33
HPS4-205ENST00000429411 TNFRSF1AP19438 455 aa6.74□□□□□ -1.33
HPS4-205ENST00000429411 CD81P60033 236 aa6.74□□□□□ -1.33
HPS4-205ENST00000429411 Q6P435 159 aa6.74□□□□□ -1.33
HPS4-205ENST00000429411 TCF23Q7RTU1 214 aa6.74□□□□□ -1.33
HPS4-205ENST00000429411 HIST3H2BBQ8N257 126 aa6.74□□□□□ -1.33
HPS4-205ENST00000429411 TAAR6Q96RI8 345 aa6.74□□□□□ -1.33
HPS4-205ENST00000429411 NPCDR1Q9BY65 106 aa6.74□□□□□ -1.33
HPS4-205ENST00000429411 GEMIN7Q9H840 131 aaKnown RBP6.74□□□□□ -1.33
HPS4-205ENST00000429411 PITPNC1Q9UKF7 332 aa6.74□□□□□ -1.33
HPS4-205ENST00000429411 MAST4O15021 2626 aa6.74□□□□□ -1.33
HPS4-205ENST00000429411 IFNL4K9M1U5 179 aa6.74□□□□□ -1.33
HPS4-205ENST00000429411 USP9YO00507 2555 aaPredicted RBP6.74□□□□□ -1.33
HPS4-205ENST00000429411 TGOLN2O43493 480 aa6.74□□□□□ -1.33
HPS4-205ENST00000429411 KBTBD11O94819 623 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms