RNA–Protein interactions for RNA: ENST00000427112.6

USP40-203, Transcript of ubiquitin specific peptidase 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP40, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-203ENST00000427112 SPTBN4Q9H254 2564 aa7.21□□□□□ -1.26
USP40-203ENST00000427112 DCHS2Q6V1P9 2916 aa7.21□□□□□ -1.26
USP40-203ENST00000427112 TRBV20OR9-2A0A075B6H5 130 aa7.21□□□□□ -1.26
USP40-203ENST00000427112 F6UZH7 168 aa7.21□□□□□ -1.26
USP40-203ENST00000427112 KBTBD11O94819 623 aa7.21□□□□□ -1.26
USP40-203ENST00000427112 KITLGP21583 273 aa7.21□□□□□ -1.26
USP40-203ENST00000427112 ADMP35318 185 aa7.21□□□□□ -1.26
USP40-203ENST00000427112 TNFSF10P50591 281 aa7.21□□□□□ -1.26
USP40-203ENST00000427112 DUSP3P51452 185 aaPredicted RBP7.21□□□□□ -1.26
USP40-203ENST00000427112 LDLRAD2Q5SZI1 272 aa7.21□□□□□ -1.26
USP40-203ENST00000427112 COLCA1Q6ZS62 124 aa7.21□□□□□ -1.26
USP40-203ENST00000427112 SPSB4Q96A44 273 aa7.21□□□□□ -1.26
USP40-203ENST00000427112 ACY3Q96HD9 319 aa7.21□□□□□ -1.26
USP40-203ENST00000427112 HSD17B10Q99714 261 aaKnown RBP7.21□□□□□ -1.26
USP40-203ENST00000427112 MCRIP2Q9BUT9 160 aaKnown RBP7.21□□□□□ -1.26
USP40-203ENST00000427112 MANBALQ9NQG1 85 aa7.21□□□□□ -1.26
USP40-203ENST00000427112 PITPNC1Q9UKF7 332 aa7.21□□□□□ -1.26
USP40-203ENST00000427112 IGHV3-72A0A0B4J1Y9 119 aa7.2□□□□□ -1.26
USP40-203ENST00000427112 MDFIC2A0A1B0GVS7 189 aa7.2□□□□□ -1.26
USP40-203ENST00000427112 M0R1B8 84 aa7.2□□□□□ -1.26
USP40-203ENST00000427112 NTN3O00634 580 aaPredicted RBP7.2□□□□□ -1.26
USP40-203ENST00000427112 DLEU1O43261 78 aa7.2□□□□□ -1.26
USP40-203ENST00000427112 CGAP01215 116 aa7.2□□□□□ -1.26
USP40-203ENST00000427112 REG1AP05451 166 aa7.2□□□□□ -1.26
USP40-203ENST00000427112 SP1P08047 785 aa7.2□□□□□ -1.26
USP40-203ENST00000427112 MSMO1Q15800 293 aa7.2□□□□□ -1.26
USP40-203ENST00000427112 OR4A47Q6IF82 309 aa7.2□□□□□ -1.26
USP40-203ENST00000427112 ZNF497Q6ZNH5 498 aa7.2□□□□□ -1.26
USP40-203ENST00000427112 OCC1Q8TAD7 63 aa7.2□□□□□ -1.26
USP40-203ENST00000427112 WNT10AQ9GZT5 417 aa7.2□□□□□ -1.26
USP40-203ENST00000427112 ABI3Q9P2A4 366 aa7.2□□□□□ -1.26
USP40-203ENST00000427112 ADAMTS20P59510 1910 aa7.2□□□□□ -1.26
USP40-203ENST00000427112 TMEM30CPA0ZSE6 113 aa7.2□□□□□ -1.26
USP40-203ENST00000427112 NDUFS8O00217 210 aa7.2□□□□□ -1.26
USP40-203ENST00000427112 PFN1P07737 140 aaKnown RBP7.2□□□□□ -1.26
USP40-203ENST00000427112 CD1BP29016 333 aa7.2□□□□□ -1.26
USP40-203ENST00000427112 ZNF766Q5HY98 468 aa7.2□□□□□ -1.26
USP40-203ENST00000427112 C1orf229Q6ZS94 237 aaPredicted RBP7.2□□□□□ -1.26
USP40-203ENST00000427112 TMEM183AQ8IXX5 376 aa7.2□□□□□ -1.26
USP40-203ENST00000427112 OR8I2Q8N0Y5 310 aa7.2□□□□□ -1.26
USP40-203ENST00000427112 BORCS7Q96B45 105 aa7.2□□□□□ -1.26
USP40-203ENST00000427112 NUDT11Q96G61 164 aa7.2□□□□□ -1.26
USP40-203ENST00000427112 HSPB9Q9BQS6 159 aa7.2□□□□□ -1.26
USP40-203ENST00000427112 ZNF430Q9H8G1 570 aaPredicted RBP7.2□□□□□ -1.26
USP40-203ENST00000427112 ZNF586Q9NXT0 402 aa7.2□□□□□ -1.26
USP40-203ENST00000427112 HSBP1L1C9JCN9 74 aa7.19□□□□□ -1.26
USP40-203ENST00000427112 GNG7O60262 68 aa7.19□□□□□ -1.26
USP40-203ENST00000427112 ZNF134P52741 427 aa7.19□□□□□ -1.26
USP40-203ENST00000427112 ERVFC1-1P60608 527 aa7.19□□□□□ -1.26
USP40-203ENST00000427112 C1orf210Q8IVY1 113 aa7.19□□□□□ -1.26
USP40-203ENST00000427112 SIGLECL1Q8N7X8 197 aa7.19□□□□□ -1.26
USP40-203ENST00000427112 Q8NFD4 153 aa7.19□□□□□ -1.26
USP40-203ENST00000427112 CORO2AQ92828 525 aa7.19□□□□□ -1.26
USP40-203ENST00000427112 UHRF2Q96PU4 802 aa7.19□□□□□ -1.26
USP40-203ENST00000427112 TMEM147Q9BVK8 224 aa7.19□□□□□ -1.26
USP40-203ENST00000427112 STRADBQ9C0K7 418 aa7.19□□□□□ -1.26
USP40-203ENST00000427112 DSCAMO60469 2012 aa7.19□□□□□ -1.26
USP40-203ENST00000427112 CTXND1A0A1B0GTU2 59 aa7.19□□□□□ -1.26
USP40-203ENST00000427112 FCN1O00602 326 aa7.19□□□□□ -1.26
USP40-203ENST00000427112 HRASP01112 189 aa7.19□□□□□ -1.26
USP40-203ENST00000427112 NDUFAF3Q9BU61 184 aa7.19□□□□□ -1.26
USP40-203ENST00000427112 TRAV5A0A0B4J249 113 aa7.19□□□□□ -1.26
USP40-203ENST00000427112 SPAARA0A1B0GVQ0 90 aa7.19□□□□□ -1.26
USP40-203ENST00000427112 OR5G3P0C626 314 aa7.19□□□□□ -1.26
USP40-203ENST00000427112 IGFBP2P18065 325 aa7.19□□□□□ -1.26
USP40-203ENST00000427112 CRYBB3P26998 211 aa7.19□□□□□ -1.26
USP40-203ENST00000427112 TIMP3P35625 211 aa7.19□□□□□ -1.26
USP40-203ENST00000427112 CNN1P51911 297 aaKnown RBP7.19□□□□□ -1.26
USP40-203ENST00000427112 CATR1Q13166 79 aa7.19□□□□□ -1.26
USP40-203ENST00000427112 OR10W1Q8NGF6 305 aa7.19□□□□□ -1.26
USP40-203ENST00000427112 BCL2L2Q92843 193 aaPredicted RBP7.19□□□□□ -1.26
USP40-203ENST00000427112 ST6GALNAC6Q969X2 333 aa7.19□□□□□ -1.26
USP40-203ENST00000427112 PCED1AQ9H1Q7 454 aa7.19□□□□□ -1.26
USP40-203ENST00000427112 POLDIP2Q9Y2S7 368 aa7.19□□□□□ -1.26
USP40-203ENST00000427112 YTHDF2Q9Y5A9 579 aaKnown RBP7.19□□□□□ -1.26
USP40-203ENST00000427112 PXMP4Q9Y6I8 212 aa7.19□□□□□ -1.26
USP40-203ENST00000427112 OR5B21A6NL26 309 aa7.18□□□□□ -1.26
USP40-203ENST00000427112 WT1P19544 449 aaPredicted RBP7.18□□□□□ -1.26
USP40-203ENST00000427112 GPR6P46095 362 aaPredicted RBP7.18□□□□□ -1.26
USP40-203ENST00000427112 PSG5Q15238 335 aa7.18□□□□□ -1.26
USP40-203ENST00000427112 CYP2G1PQ6ZSU1 146 aa7.18□□□□□ -1.26
USP40-203ENST00000427112 MIR17HGQ75NE6 70 aa7.18□□□□□ -1.26
USP40-203ENST00000427112 CD177Q8N6Q3 437 aa7.18□□□□□ -1.26
USP40-203ENST00000427112 ALKBH7Q9BT30 221 aaPredicted RBP7.18□□□□□ -1.26
USP40-203ENST00000427112 IL19Q9UHD0 177 aa7.18□□□□□ -1.26
USP40-203ENST00000427112 MPC1Q9Y5U8 109 aa7.18□□□□□ -1.26
USP40-203ENST00000427112 COL5A1P20908 1838 aaPredicted RBP7.18□□□□□ -1.26
USP40-203ENST00000427112 A0A087WWC5 75 aa7.18□□□□□ -1.26
USP40-203ENST00000427112 K7ERU9 68 aa7.18□□□□□ -1.26
USP40-203ENST00000427112 PROP1O75360 226 aa7.18□□□□□ -1.26
USP40-203ENST00000427112 GOSR1O95249 250 aa7.18□□□□□ -1.26
USP40-203ENST00000427112 CAMPP49913 170 aa7.18□□□□□ -1.26
USP40-203ENST00000427112 RPL31P62899 125 aaKnown RBP7.18□□□□□ -1.26
USP40-203ENST00000427112 CCL8P80075 99 aa7.18□□□□□ -1.26
USP40-203ENST00000427112 C10orf55Q5SWW7 151 aa7.18□□□□□ -1.26
USP40-203ENST00000427112 DEFB123Q8N688 67 aa7.18□□□□□ -1.26
USP40-203ENST00000427112 SNHG12Q9BXW3 62 aa7.18□□□□□ -1.26
USP40-203ENST00000427112 SRD5A3Q9H8P0 318 aa7.18□□□□□ -1.26
USP40-203ENST00000427112 BET1LQ9NYM9 111 aa7.18□□□□□ -1.26
USP40-203ENST00000427112 KLF13Q9Y2Y9 288 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms