RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 IGHV4-61A0A0C4DH41 118 aa12.25□□□□□ -0.45
ACTB-204ENST00000425660 ZNF705EA8MWA4 302 aaPredicted RBP12.25□□□□□ -0.45
ACTB-204ENST00000425660 IFNA5P01569 189 aa12.25□□□□□ -0.45
ACTB-204ENST00000425660 OR8U8P0C7N1 319 aa12.25□□□□□ -0.45
ACTB-204ENST00000425660 HOXB4P17483 251 aaPredicted RBP12.25□□□□□ -0.45
ACTB-204ENST00000425660 DSCR9P59020 149 aa12.25□□□□□ -0.45
ACTB-204ENST00000425660 RPL8P62917 257 aaKnown RBP12.25□□□□□ -0.45
ACTB-204ENST00000425660 KLRD1Q13241 179 aa12.25□□□□□ -0.45
ACTB-204ENST00000425660 VWC2Q2TAL6 325 aa12.25□□□□□ -0.45
ACTB-204ENST00000425660 LILRB2Q8N423 598 aa12.25□□□□□ -0.45
ACTB-204ENST00000425660 RNF5Q99942 180 aa12.25□□□□□ -0.45
ACTB-204ENST00000425660 HEYLQ9NQ87 328 aaPredicted RBP12.25□□□□□ -0.45
ACTB-204ENST00000425660 CELSR2Q9HCU4 2923 aa12.25□□□□□ -0.45
ACTB-204ENST00000425660 IGHV3-72A0A0B4J1Y9 119 aa12.24□□□□□ -0.45
ACTB-204ENST00000425660 TEX50A0A1B0GTY4 177 aa12.24□□□□□ -0.45
ACTB-204ENST00000425660 FAM157AC9JC47 383 aa12.24□□□□□ -0.45
ACTB-204ENST00000425660 INS-IGF2F8WCM5 200 aa12.24□□□□□ -0.45
ACTB-204ENST00000425660 HOXA1P49639 335 aaPredicted RBP12.24□□□□□ -0.45
ACTB-204ENST00000425660 LRRC75BQ2VPJ9 315 aa12.24□□□□□ -0.45
ACTB-204ENST00000425660 VMA21Q3ZAQ7 101 aa12.24□□□□□ -0.45
ACTB-204ENST00000425660 OR8G2PQ6IF36 304 aa12.24□□□□□ -0.45
ACTB-204ENST00000425660 MOB3BQ86TA1 216 aa12.24□□□□□ -0.45
ACTB-204ENST00000425660 THNSL2Q86YJ6 484 aa12.24□□□□□ -0.45
ACTB-204ENST00000425660 NRGNQ92686 78 aa12.24□□□□□ -0.45
ACTB-204ENST00000425660 PERPQ96FX8 193 aa12.24□□□□□ -0.45
ACTB-204ENST00000425660 RITA1Q96K30 269 aa12.24□□□□□ -0.45
ACTB-204ENST00000425660 PARP11Q9NR21 331 aa12.24□□□□□ -0.45
ACTB-204ENST00000425660 SVEP1Q4LDE5 3571 aa12.24□□□□□ -0.45
ACTB-204ENST00000425660 IGHV4-30-2A0A087WSY4 118 aa12.23□□□□□ -0.45
ACTB-204ENST00000425660 ANKRD34BA5PLL1 514 aa12.23□□□□□ -0.45
ACTB-204ENST00000425660 OOSP1A8MZH6 123 aa12.23□□□□□ -0.45
ACTB-204ENST00000425660 UMAD1C9J7I0 102 aa12.23□□□□□ -0.45
ACTB-204ENST00000425660 PRSS46E5RG02 174 aa12.23□□□□□ -0.45
ACTB-204ENST00000425660 TOX4O94842 621 aa12.23□□□□□ -0.45
ACTB-204ENST00000425660 DVL1P1P54792 670 aaPredicted RBP12.23□□□□□ -0.45
ACTB-204ENST00000425660 MRGPRG-AS1Q2M3A8 158 aa12.23□□□□□ -0.45
ACTB-204ENST00000425660 MINOS1Q5TGZ0 78 aa12.23□□□□□ -0.45
ACTB-204ENST00000425660 HSD17B13Q7Z5P4 300 aaPredicted RBP12.23□□□□□ -0.45
ACTB-204ENST00000425660 TEX45Q8NA69 505 aa12.23□□□□□ -0.45
ACTB-204ENST00000425660 LYPD6BQ8NI32 183 aa12.23□□□□□ -0.45
ACTB-204ENST00000425660 TMEM170AQ8WVE7 144 aa12.23□□□□□ -0.45
ACTB-204ENST00000425660 CFHR4Q92496 578 aa12.23□□□□□ -0.45
ACTB-204ENST00000425660 WDR61Q9GZS3 305 aaKnown RBP12.23□□□□□ -0.45
ACTB-204ENST00000425660 NDUFA4L2Q9NRX3 87 aa12.23□□□□□ -0.45
ACTB-204ENST00000425660 MINOS1-NBL1R4GNA1 71 aa12.23□□□□□ -0.45
ACTB-204ENST00000425660 TRIM77I1YAP6 450 aa12.23□□□□□ -0.45
ACTB-204ENST00000425660 IFNA10P01566 189 aa12.23□□□□□ -0.45
ACTB-204ENST00000425660 CRYGBP07316 175 aa12.23□□□□□ -0.45
ACTB-204ENST00000425660 MYOD1P15172 320 aa12.23□□□□□ -0.45
ACTB-204ENST00000425660 CD1BP29016 333 aa12.23□□□□□ -0.45
ACTB-204ENST00000425660 BLOC1S1P78537 153 aa12.23□□□□□ -0.45
ACTB-204ENST00000425660 RUNX1Q01196 453 aa12.23□□□□□ -0.45
ACTB-204ENST00000425660 PXDC1Q5TGL8 231 aa12.23□□□□□ -0.45
ACTB-204ENST00000425660 ZNF787Q6DD87 383 aa12.23□□□□□ -0.45
ACTB-204ENST00000425660 LHFPL4Q7Z7J7 247 aa12.23□□□□□ -0.45
ACTB-204ENST00000425660 TBX15Q96SF7 602 aa12.23□□□□□ -0.45
ACTB-204ENST00000425660 COMMD5Q9GZQ3 224 aa12.23□□□□□ -0.45
ACTB-204ENST00000425660 PLEKHA3Q9HB20 300 aa12.23□□□□□ -0.45
ACTB-204ENST00000425660 TET2Q6N021 2002 aaPredicted RBP12.22□□□□□ -0.45
ACTB-204ENST00000425660 RRHO14718 337 aa12.22□□□□□ -0.45
ACTB-204ENST00000425660 TIMM23O14925 209 aa12.22□□□□□ -0.45
ACTB-204ENST00000425660 SLC25A17O43808 307 aa12.22□□□□□ -0.45
ACTB-204ENST00000425660 MDKP21741 143 aaPredicted RBP12.22□□□□□ -0.45
ACTB-204ENST00000425660 UBE2E1P51965 193 aa12.22□□□□□ -0.45
ACTB-204ENST00000425660 ATP5IP56385 69 aaPredicted RBP12.22□□□□□ -0.45
ACTB-204ENST00000425660 AANATQ16613 207 aa12.22□□□□□ -0.45
ACTB-204ENST00000425660 BSXQ3C1V8 233 aa12.22□□□□□ -0.45
ACTB-204ENST00000425660 SLC24A4Q8NFF2 622 aa12.22□□□□□ -0.45
ACTB-204ENST00000425660 OR2G3Q8NGZ4 309 aa12.22□□□□□ -0.45
ACTB-204ENST00000425660 PSMG3Q9BT73 122 aaPredicted RBP12.22□□□□□ -0.45
ACTB-204ENST00000425660 TMEM147Q9BVK8 224 aa12.22□□□□□ -0.45
ACTB-204ENST00000425660 GGACTQ9BVM4 153 aa12.22□□□□□ -0.45
ACTB-204ENST00000425660 ZNF430Q9H8G1 570 aaPredicted RBP12.22□□□□□ -0.45
ACTB-204ENST00000425660 ENY2Q9NPA8 101 aa12.22□□□□□ -0.45
ACTB-204ENST00000425660 UQCC1Q9NVA1 299 aa12.22□□□□□ -0.45
ACTB-204ENST00000425660 CENPEQ02224 2701 aa12.22□□□□□ -0.45
ACTB-204ENST00000425660 VENTXO95231 258 aa12.21□□□□□ -0.45
ACTB-204ENST00000425660 PAX8Q06710 450 aa12.21□□□□□ -0.45
ACTB-204ENST00000425660 CCDC144NLQ6NUI1 221 aa12.21□□□□□ -0.45
ACTB-204ENST00000425660 CENPVQ7Z7K6 275 aaPredicted RBP12.21□□□□□ -0.45
ACTB-204ENST00000425660 OR1L8Q8NGR8 309 aa12.21□□□□□ -0.45
ACTB-204ENST00000425660 SCGB1C1Q8TD33 95 aa12.21□□□□□ -0.45
ACTB-204ENST00000425660 TBL2Q9Y4P3 447 aaKnown RBP12.21□□□□□ -0.45
ACTB-204ENST00000425660 TNCP24821 2201 aa12.21□□□□□ -0.45
ACTB-204ENST00000425660 NUDT19A8MXV4 375 aa12.21□□□□□ -0.46
ACTB-204ENST00000425660 NPY1RP25929 384 aa12.21□□□□□ -0.46
ACTB-204ENST00000425660 F2RL1P55085 397 aa12.21□□□□□ -0.46
ACTB-204ENST00000425660 RAB11AP62491 216 aa12.21□□□□□ -0.46
ACTB-204ENST00000425660 PSG5Q15238 335 aa12.21□□□□□ -0.46
ACTB-204ENST00000425660 SLC25A24Q6NUK1 477 aa12.21□□□□□ -0.46
ACTB-204ENST00000425660 BTNL8Q6UX41 500 aa12.21□□□□□ -0.46
ACTB-204ENST00000425660 TAF15Q92804 592 aaKnown RBP eCLIP12.21□□□□□ -0.46
ACTB-204ENST00000425660 TPSG1Q9NRR2 321 aa12.21□□□□□ -0.46
ACTB-204ENST00000425660 SIGLEC9Q9Y336 463 aa12.21□□□□□ -0.46
ACTB-204ENST00000425660 HILPDAQ9Y5L2 63 aa12.21□□□□□ -0.46
ACTB-204ENST00000425660 RFNGQ9Y644 331 aa12.21□□□□□ -0.46
ACTB-204ENST00000425660 MED13LQ71F56 2210 aa12.2□□□□□ -0.46
ACTB-204ENST00000425660 UBE2L5PA0A1B0GUS4 154 aa12.2□□□□□ -0.46
ACTB-204ENST00000425660 CGB1A6NKQ9 187 aa12.2□□□□□ -0.46
ACTB-204ENST00000425660 E7EUB6 86 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms