RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 WDR45Q9Y484 360 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 URGCP-MRPS24S4R325 110 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 SCN2AQ99250 2005 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 MED12LQ86YW9 2145 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 SSC5DA1L4H1 1573 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 PAPPA2Q9BXP8 1791 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 IGHV7-81A0A0B4J1V7 117 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 TRAV8-6A0A0B4J262 113 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 TRBV2A0A0J9YWF9 115 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 A0A0J9YY10 115 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 A0A1B0GX78 115 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 TMEM189A5PLL7 270 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 HELTA6NFD8 242 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 OR51F1A6NGY5 319 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 OR2T8A6NH00 312 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 FBLL1A6NHQ2 334 aaKnown RBP2.17□□□□□ -2.06
LINC01040-201ENST00000425048 IFITM5A6NNB3 132 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 CLDN34H7C241 214 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 K7EQM0 130 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 K7N7A8 449 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 M0QXV9 152 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 TAAR5O14804 337 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 NPIPB7O75200 414 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 CNMDO75829 334 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 OPN1SWP03999 348 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 IGKV4-1P06312 121 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 CTSLP07711 333 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 AKAIN1P0CW23 69 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 SMIM17P0DL12 118 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 PNMTP11086 282 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 IGFBP3P17936 291 aaPredicted RBP2.17□□□□□ -2.06
LINC01040-201ENST00000425048 TCN2P20062 427 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 RPS4Y1P22090 263 aaKnown RBP2.17□□□□□ -2.06
LINC01040-201ENST00000425048 OMGP23515 440 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 AK4P27144 223 aaPredicted RBP2.17□□□□□ -2.06
LINC01040-201ENST00000425048 CD34P28906 385 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 PYCR1P32322 319 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 S100A3P33764 101 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 SSTR5P35346 364 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 ADRA1AP35348 466 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 FAUP35544 74 aaKnown RBP2.17□□□□□ -2.06
LINC01040-201ENST00000425048 PPP1CCP36873 323 aaKnown RBP2.17□□□□□ -2.06
LINC01040-201ENST00000425048 NSG1P42857 185 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 OR1E2P47887 323 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 PRLHRP49683 370 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 ZNF83P51522 516 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 LIM2P55344 173 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 TAS2R20P59543 309 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 RPL38P63173 70 aaKnown RBP2.17□□□□□ -2.06
LINC01040-201ENST00000425048 PSG9Q00887 426 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 RUNX1Q01196 453 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 HMGCS1Q01581 520 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 ZNF92Q03936 586 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 HSD52Q0P140 79 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 ZNF154Q13106 437 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 IL15RAQ13261 267 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 TSTA3Q13630 321 aaPredicted RBP2.17□□□□□ -2.06
LINC01040-201ENST00000425048 FZD2Q14332 565 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 GNMTQ14749 295 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 LTC4SQ16873 150 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 SPATA45Q537H7 98 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 SPIN3Q5JUX0 258 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 RAET1LQ5VY80 246 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 SPATA31B1PQ5VZV4 182 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 TMEM42Q69YG0 159 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 SLC8B1Q6J4K2 584 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 ZNF562Q6V9R5 426 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 ERASQ7Z444 233 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 COMMD6Q7Z4G1 85 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 TMED4Q7Z7H5 227 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 TMEM256Q8N2U0 113 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 PNKDQ8N490 385 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 SMIM20Q8N5G0 67 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 DEFB125Q8N687 156 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 ZIC4Q8N9L1 334 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 LFNGQ8NES3 379 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 OR8G5Q8NG78 346 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 OR10G4Q8NGN3 311 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 OR2Y1Q8NGV0 311 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 OR6K2Q8NGY2 324 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 GALMQ96C23 342 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 SLAMF6Q96DU3 332 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 PGLYRP3Q96LB9 341 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 GPA33Q99795 319 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 MED10Q9BTT4 135 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 APOOQ9BUR5 198 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 NUDT9Q9BW91 350 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 PKIBQ9C010 78 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 GTSF1LQ9H1H1 148 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 TAF9BQ9HBM6 251 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 POPDC3Q9HBV1 291 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 RAB18Q9NP72 206 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 TMEM9BQ9NQ34 198 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 CISHQ9NSE2 258 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 MRPL22Q9NWU5 206 aaKnown RBP2.17□□□□□ -2.06
LINC01040-201ENST00000425048 ZNF586Q9NXT0 402 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 TVP23BQ9NYZ1 205 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 EHFQ9NZC4 300 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 VPREB3Q9UKI3 123 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 ZNF835Q9Y2P0 537 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms