RNA–Protein interactions for RNA: ENST00000424235.1

SNHG17-205, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 764 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-205ENST00000424235 RABL2AQ9UBK7 228 aaPredicted RBP12.36□□□□□ -0.43
SNHG17-205ENST00000424235 PEMTQ9UBM1 199 aa12.36□□□□□ -0.43
SNHG17-205ENST00000424235 RABL2BQ9UNT1 228 aa12.36□□□□□ -0.43
SNHG17-205ENST00000424235 ZNF257Q9Y2Q1 563 aa12.36□□□□□ -0.43
SNHG17-205ENST00000424235 RLN1P04808 185 aa12.35□□□□□ -0.43
SNHG17-205ENST00000424235 REG1AP05451 166 aa12.35□□□□□ -0.43
SNHG17-205ENST00000424235 HLA-GP17693 338 aa12.35□□□□□ -0.43
SNHG17-205ENST00000424235 PTBP1P26599 531 aaKnown RBP eCLIP12.35□□□□□ -0.43
SNHG17-205ENST00000424235 HLA-DMAP28067 261 aa12.35□□□□□ -0.43
SNHG17-205ENST00000424235 S100GP29377 79 aa12.35□□□□□ -0.43
SNHG17-205ENST00000424235 TSPAN5P62079 268 aa12.35□□□□□ -0.43
SNHG17-205ENST00000424235 RNASE12Q5GAN4 147 aaKnown RBP12.35□□□□□ -0.43
SNHG17-205ENST00000424235 OR4A47Q6IF82 309 aa12.35□□□□□ -0.43
SNHG17-205ENST00000424235 SGPP2Q8IWX5 399 aa12.35□□□□□ -0.43
SNHG17-205ENST00000424235 CMTM1Q8IZ96 169 aa12.35□□□□□ -0.43
SNHG17-205ENST00000424235 NECAP1Q8NC96 275 aa12.35□□□□□ -0.43
SNHG17-205ENST00000424235 DYNLRB2Q8TF09 96 aa12.35□□□□□ -0.43
SNHG17-205ENST00000424235 C15orf40Q8WUR7 153 aa12.35□□□□□ -0.43
SNHG17-205ENST00000424235 COMMD5Q9GZQ3 224 aa12.35□□□□□ -0.43
SNHG17-205ENST00000424235 FBXL7Q9UJT9 491 aa12.35□□□□□ -0.43
SNHG17-205ENST00000424235 V9GYH0 126 aa12.35□□□□□ -0.43
SNHG17-205ENST00000424235 H0Y980 276 aa12.34□□□□□ -0.43
SNHG17-205ENST00000424235 HPRT1P00492 218 aa12.34□□□□□ -0.43
SNHG17-205ENST00000424235 IGHV3-23P01764 117 aa12.34□□□□□ -0.43
SNHG17-205ENST00000424235 NQO2P16083 231 aa12.34□□□□□ -0.43
SNHG17-205ENST00000424235 KLF5Q13887 457 aaPredicted RBP12.34□□□□□ -0.43
SNHG17-205ENST00000424235 MSMO1Q15800 293 aa12.34□□□□□ -0.43
SNHG17-205ENST00000424235 C19orf35Q6ZS72 473 aa12.34□□□□□ -0.43
SNHG17-205ENST00000424235 GTSCR1Q86UQ5 136 aa12.34□□□□□ -0.43
SNHG17-205ENST00000424235 PUSL1Q8N0Z8 303 aaKnown RBP12.34□□□□□ -0.43
SNHG17-205ENST00000424235 TTC9CQ8N5M4 171 aa12.34□□□□□ -0.43
SNHG17-205ENST00000424235 OR6F1Q8NGZ6 308 aa12.34□□□□□ -0.43
SNHG17-205ENST00000424235 OR4A5Q8NH83 315 aa12.34□□□□□ -0.43
SNHG17-205ENST00000424235 CD300LFQ8TDQ1 290 aa12.34□□□□□ -0.43
SNHG17-205ENST00000424235 GIMAP1Q8WWP7 306 aa12.34□□□□□ -0.43
SNHG17-205ENST00000424235 HINT2Q9BX68 163 aa12.34□□□□□ -0.43
SNHG17-205ENST00000424235 S4R3C0 116 aa12.34□□□□□ -0.43
SNHG17-205ENST00000424235 TPPPO94811 219 aa12.33□□□□□ -0.44
SNHG17-205ENST00000424235 S1PR2O95136 353 aa12.33□□□□□ -0.44
SNHG17-205ENST00000424235 BRI3O95415 125 aa12.33□□□□□ -0.44
SNHG17-205ENST00000424235 MYOD1P15172 320 aa12.33□□□□□ -0.44
SNHG17-205ENST00000424235 AREGP15514 252 aa12.33□□□□□ -0.44
SNHG17-205ENST00000424235 HRH1P35367 487 aa12.33□□□□□ -0.44
SNHG17-205ENST00000424235 TAS2R31P59538 309 aa12.33□□□□□ -0.44
SNHG17-205ENST00000424235 EIF4EBP1Q13541 118 aaPredicted RBP12.33□□□□□ -0.44
SNHG17-205ENST00000424235 PYDC2Q56P42 97 aa12.33□□□□□ -0.44
SNHG17-205ENST00000424235 LCN12Q6JVE5 192 aa12.33□□□□□ -0.44
SNHG17-205ENST00000424235 SLC2A9Q9NRM0 540 aa12.33□□□□□ -0.44
SNHG17-205ENST00000424235 NPIPB5A8MRT5 1133 aa12.32□□□□□ -0.44
SNHG17-205ENST00000424235 TEX22C9J3V5 150 aa12.32□□□□□ -0.44
SNHG17-205ENST00000424235 PPP5D1E7EU14 171 aa12.32□□□□□ -0.44
SNHG17-205ENST00000424235 RBFOX2O43251 390 aaKnown RBP eCLIP12.32□□□□□ -0.449e-17■■■■■ 31.6
SNHG17-205ENST00000424235 RBMXL2O75526 392 aaKnown RBP12.32□□□□□ -0.44
SNHG17-205ENST00000424235 IGLV1-51P01701 117 aa12.32□□□□□ -0.44
SNHG17-205ENST00000424235 IL6RP08887 468 aaPredicted RBP12.32□□□□□ -0.44
SNHG17-205ENST00000424235 FRMD6-AS1P0C7T7 363 aa12.32□□□□□ -0.44
SNHG17-205ENST00000424235 PPP5CP53041 499 aa12.32□□□□□ -0.44
SNHG17-205ENST00000424235 FAM209BQ5JX69 171 aa12.32□□□□□ -0.44
SNHG17-205ENST00000424235 EEF1AKMT3Q96AZ1 226 aa12.32□□□□□ -0.44
SNHG17-205ENST00000424235 SOSTQ9BQB4 213 aa12.32□□□□□ -0.44
SNHG17-205ENST00000424235 ZMAT4Q9H898 229 aa12.32□□□□□ -0.44
SNHG17-205ENST00000424235 TMEM140Q9NV12 185 aa12.32□□□□□ -0.44
SNHG17-205ENST00000424235 BET1LQ9NYM9 111 aa12.32□□□□□ -0.44
SNHG17-205ENST00000424235 BMPR1BO00238 502 aa12.31□□□□□ -0.44
SNHG17-205ENST00000424235 CYB5BO43169 146 aa12.31□□□□□ -0.44
SNHG17-205ENST00000424235 HLA-AP01891 365 aaKnown RBP12.31□□□□□ -0.44
SNHG17-205ENST00000424235 ZNF735P0CB33 412 aa12.31□□□□□ -0.44
SNHG17-205ENST00000424235 HIST1H1BP16401 226 aaKnown RBP12.31□□□□□ -0.44
SNHG17-205ENST00000424235 PSMB6P28072 239 aa12.31□□□□□ -0.44
SNHG17-205ENST00000424235 ARL3P36405 182 aa12.31□□□□□ -0.44
SNHG17-205ENST00000424235 MECP2P51608 486 aaKnown RBP12.31□□□□□ -0.44
SNHG17-205ENST00000424235 BRWD1-AS2P59051 145 aa12.31□□□□□ -0.44
SNHG17-205ENST00000424235 ZNF79Q15937 498 aa12.31□□□□□ -0.44
SNHG17-205ENST00000424235 PHLDA2Q53GA4 152 aa12.31□□□□□ -0.44
SNHG17-205ENST00000424235 CLEC19AQ6UXS0 136 aa12.31□□□□□ -0.44
SNHG17-205ENST00000424235 GDPD1Q8N9F7 314 aa12.31□□□□□ -0.44
SNHG17-205ENST00000424235 MOB3AQ96BX8 217 aa12.31□□□□□ -0.44
SNHG17-205ENST00000424235 ABHD1Q96SE0 405 aa12.31□□□□□ -0.44
SNHG17-205ENST00000424235 SRRQ9GZT4 340 aa12.31□□□□□ -0.44
SNHG17-205ENST00000424235 TUBA4BQ9H853 241 aa12.31□□□□□ -0.44
SNHG17-205ENST00000424235 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.3□□□□□ -0.44
SNHG17-205ENST00000424235 TRBV9A0A0B4J1U6 114 aa12.3□□□□□ -0.44
SNHG17-205ENST00000424235 ZNF320A2RRD8 509 aa12.3□□□□□ -0.44
SNHG17-205ENST00000424235 GPR31O00270 319 aa12.3□□□□□ -0.44
SNHG17-205ENST00000424235 CTDSPLO15194 276 aa12.3□□□□□ -0.44
SNHG17-205ENST00000424235 GGCTO75223 188 aaKnown RBP12.3□□□□□ -0.44
SNHG17-205ENST00000424235 SNAPC5O75971 98 aa12.3□□□□□ -0.44
SNHG17-205ENST00000424235 GNRHRP30968 328 aa12.3□□□□□ -0.44
SNHG17-205ENST00000424235 RCVRNP35243 200 aa12.3□□□□□ -0.44
SNHG17-205ENST00000424235 MRPS10P82664 201 aaKnown RBP12.3□□□□□ -0.44
SNHG17-205ENST00000424235 Q8N402 240 aa12.3□□□□□ -0.44
SNHG17-205ENST00000424235 CCDC32Q9BV29 185 aa12.3□□□□□ -0.44
SNHG17-205ENST00000424235 FXYD6Q9H0Q3 95 aa12.3□□□□□ -0.44
SNHG17-205ENST00000424235 PLEKHA2Q9HB19 425 aa12.3□□□□□ -0.44
SNHG17-205ENST00000424235 COMMD9Q9P000 198 aa12.3□□□□□ -0.44
SNHG17-205ENST00000424235 TRAV3A0A0B4J244 114 aa12.29□□□□□ -0.44
SNHG17-205ENST00000424235 MARCH11A6NNE9 402 aa12.29□□□□□ -0.44
SNHG17-205ENST00000424235 E7EUB6 86 aa12.29□□□□□ -0.44
SNHG17-205ENST00000424235 UPK2O00526 184 aa12.29□□□□□ -0.44
SNHG17-205ENST00000424235 PGLYRP1O75594 196 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms