RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-206	ENST00000423161	EEF1AKMT3	Q96AZ1	226 aa		13.93	□□□□□ -0.18
SREBF1-206	ENST00000423161	WDR89	Q96FK6	387 aa	Predicted RBP	13.93	□□□□□ -0.18
SREBF1-206	ENST00000423161	FAM110A	Q9BQ89	295 aa		13.93	□□□□□ -0.18
SREBF1-206	ENST00000423161	SLC5A7	Q9GZV3	580 aa		13.93	□□□□□ -0.18
SREBF1-206	ENST00000423161	SRD5A3	Q9H8P0	318 aa		13.93	□□□□□ -0.18
SREBF1-206	ENST00000423161	HRASLS	Q9HDD0	168 aa		13.93	□□□□□ -0.18
SREBF1-206	ENST00000423161		A0A0A6YYH2	397 aa		13.92	□□□□□ -0.18
SREBF1-206	ENST00000423161		A6NJ64	397 aa		13.92	□□□□□ -0.18
SREBF1-206	ENST00000423161	OR11H12	B2RN74	326 aa		13.92	□□□□□ -0.18
SREBF1-206	ENST00000423161	FCER2	P06734	321 aa		13.92	□□□□□ -0.18
SREBF1-206	ENST00000423161	DEFA4	P12838	97 aa		13.92	□□□□□ -0.18
SREBF1-206	ENST00000423161	HIST1H1B	P16401	226 aa	Known RBP	13.92	□□□□□ -0.18
SREBF1-206	ENST00000423161	FXYD4	P59646	89 aa		13.92	□□□□□ -0.18
SREBF1-206	ENST00000423161	CATR1	Q13166	79 aa		13.92	□□□□□ -0.18
SREBF1-206	ENST00000423161	ZBTB34	Q8NCN2	500 aa		13.92	□□□□□ -0.18
SREBF1-206	ENST00000423161	OR4A5	Q8NH83	315 aa		13.92	□□□□□ -0.18
SREBF1-206	ENST00000423161	AIFM2	Q9BRQ8	373 aa		13.92	□□□□□ -0.18
SREBF1-206	ENST00000423161	SELENOK	Q9Y6D0	94 aa		13.92	□□□□□ -0.18
SREBF1-206	ENST00000423161	RBMY1B	A6NDE4	496 aa	Known RBP	13.91	□□□□□ -0.18
SREBF1-206	ENST00000423161	RBMY1E	A6NEQ0	496 aa	Known RBP	13.91	□□□□□ -0.18
SREBF1-206	ENST00000423161	CGB1	A6NKQ9	187 aa		13.91	□□□□□ -0.18
SREBF1-206	ENST00000423161	SULT1C2	O00338	296 aa		13.91	□□□□□ -0.18
SREBF1-206	ENST00000423161	RBFOX2	O43251	390 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
SREBF1-206	ENST00000423161	RBMY1D	P0C7P1	496 aa	Known RBP	13.91	□□□□□ -0.18
SREBF1-206	ENST00000423161	CBLN1	P23435	193 aa		13.91	□□□□□ -0.18
SREBF1-206	ENST00000423161	KLK9	Q2XQG4	91 aa		13.91	□□□□□ -0.18
SREBF1-206	ENST00000423161	FAM106A	Q4KMX7	169 aa		13.91	□□□□□ -0.18
SREBF1-206	ENST00000423161	AUNIP	Q9H7T9	357 aa		13.91	□□□□□ -0.18
SREBF1-206	ENST00000423161	DIABLO	Q9NR28	239 aa		13.91	□□□□□ -0.18
SREBF1-206	ENST00000423161	KLK9	Q9UKQ9	250 aa		13.91	□□□□□ -0.18
SREBF1-206	ENST00000423161	IGLV11-55	A0A075B6I3	123 aa		13.9	□□□□□ -0.18
SREBF1-206	ENST00000423161	ZNF320	A2RRD8	509 aa		13.9	□□□□□ -0.18
SREBF1-206	ENST00000423161	TMEM213	A2RRL7	107 aa		13.9	□□□□□ -0.18
SREBF1-206	ENST00000423161	MFSD2B	A6NFX1	497 aa		13.9	□□□□□ -0.18
SREBF1-206	ENST00000423161		A8MWP6	167 aa		13.9	□□□□□ -0.18
SREBF1-206	ENST00000423161	TMEM61	Q8N0U2	210 aa		13.9	□□□□□ -0.18
SREBF1-206	ENST00000423161	TRBV7-1	A0A0A6YYK4	115 aa		13.89	□□□□□ -0.19
SREBF1-206	ENST00000423161	HPRT1	P00492	218 aa		13.89	□□□□□ -0.19
SREBF1-206	ENST00000423161	NQO2	P16083	231 aa		13.89	□□□□□ -0.19
SREBF1-206	ENST00000423161	CBX5	P45973	191 aa		13.89	□□□□□ -0.19
SREBF1-206	ENST00000423161	TAS2R31	P59538	309 aa		13.89	□□□□□ -0.19
SREBF1-206	ENST00000423161	OR2B8P	P59922	312 aa		13.89	□□□□□ -0.19
SREBF1-206	ENST00000423161	NEDD8	Q15843	81 aa		13.89	□□□□□ -0.19
SREBF1-206	ENST00000423161	ZNF57	Q68EA5	555 aa	Predicted RBP	13.89	□□□□□ -0.19
SREBF1-206	ENST00000423161	ZNF818P	Q6ZRF7	136 aa		13.89	□□□□□ -0.19
SREBF1-206	ENST00000423161	SLC16A13	Q7RTY0	426 aa		13.89	□□□□□ -0.19
SREBF1-206	ENST00000423161	TMEM17	Q86X19	198 aa		13.89	□□□□□ -0.19
SREBF1-206	ENST00000423161	OR5AP2	Q8NGF4	316 aa		13.89	□□□□□ -0.19
SREBF1-206	ENST00000423161	OR51H1	Q8NH63	302 aa		13.89	□□□□□ -0.19
SREBF1-206	ENST00000423161	CXorf58	Q96LI9	332 aa		13.89	□□□□□ -0.19
SREBF1-206	ENST00000423161	MLX	Q9UH92	298 aa		13.89	□□□□□ -0.19
SREBF1-206	ENST00000423161	TRAV3	A0A0B4J244	114 aa		13.88	□□□□□ -0.19
SREBF1-206	ENST00000423161	IGLC7	A0M8Q6	106 aa		13.88	□□□□□ -0.19
SREBF1-206	ENST00000423161	MEIS3P1	A6NDR6	274 aa		13.88	□□□□□ -0.19
SREBF1-206	ENST00000423161	UPK2	O00526	184 aa		13.88	□□□□□ -0.19
SREBF1-206	ENST00000423161	POU2AF1	Q16633	256 aa		13.88	□□□□□ -0.19
SREBF1-206	ENST00000423161	UXS1	Q8NBZ7	420 aa		13.88	□□□□□ -0.19
SREBF1-206	ENST00000423161	IL17D	Q8TAD2	202 aa		13.88	□□□□□ -0.19
SREBF1-206	ENST00000423161	GIMAP1	Q8WWP7	306 aa		13.88	□□□□□ -0.19
SREBF1-206	ENST00000423161	COMMD5	Q9GZQ3	224 aa		13.88	□□□□□ -0.19
SREBF1-206	ENST00000423161	S1PR2	O95136	353 aa		13.87	□□□□□ -0.19
SREBF1-206	ENST00000423161	CLEC3B	P05452	202 aa		13.87	□□□□□ -0.19
SREBF1-206	ENST00000423161	GPR183	P32249	361 aa		13.87	□□□□□ -0.19
SREBF1-206	ENST00000423161	HERV-K104	P61576	105 aa		13.87	□□□□□ -0.19
SREBF1-206	ENST00000423161	AADACL3	Q5VUY0	350 aa		13.87	□□□□□ -0.19
SREBF1-206	ENST00000423161	BTNL8	Q6UX41	500 aa		13.87	□□□□□ -0.19
SREBF1-206	ENST00000423161	DMBX1	Q8NFW5	382 aa		13.87	□□□□□ -0.19
SREBF1-206	ENST00000423161	OR52B4	Q8NGK2	314 aa		13.87	□□□□□ -0.19
SREBF1-206	ENST00000423161	IFT46	Q9NQC8	304 aa		13.87	□□□□□ -0.19
SREBF1-206	ENST00000423161	TMEM140	Q9NV12	185 aa		13.87	□□□□□ -0.19
SREBF1-206	ENST00000423161	SCAF4	O95104	1147 aa	Known RBP	13.86	□□□□□ -0.19
SREBF1-206	ENST00000423161	TM4SF20	Q53R12	229 aa		13.86	□□□□□ -0.19
SREBF1-206	ENST00000423161	UNQ9165/PRO28630	Q6UXU0	137 aa		13.86	□□□□□ -0.19
SREBF1-206	ENST00000423161	ZNF502	Q8TBZ5	544 aa		13.86	□□□□□ -0.19
SREBF1-206	ENST00000423161	CD300LF	Q8TDQ1	290 aa		13.86	□□□□□ -0.19
SREBF1-206	ENST00000423161	SRSF8	Q9BRL6	282 aa	Known RBP	13.86	□□□□□ -0.19
SREBF1-206	ENST00000423161	QTRT1	Q9BXR0	403 aa	Known RBP	13.86	□□□□□ -0.19
SREBF1-206	ENST00000423161	PLEKHA2	Q9HB19	425 aa		13.86	□□□□□ -0.19
SREBF1-206	ENST00000423161	EHF	Q9NZC4	300 aa		13.86	□□□□□ -0.19
SREBF1-206	ENST00000423161	COMMD9	Q9P000	198 aa		13.86	□□□□□ -0.19
SREBF1-206	ENST00000423161	THYN1	Q9P016	225 aa		13.86	□□□□□ -0.19
SREBF1-206	ENST00000423161	TMEM127	O75204	238 aa		13.85	□□□□□ -0.19
SREBF1-206	ENST00000423161	RPA2	P15927	270 aa		13.85	□□□□□ -0.19
SREBF1-206	ENST00000423161	PLET1	Q6UQ28	207 aa		13.85	□□□□□ -0.19
SREBF1-206	ENST00000423161	OR10W1	Q8NGF6	305 aa		13.85	□□□□□ -0.19
SREBF1-206	ENST00000423161	BORCS5	Q969J3	196 aa		13.85	□□□□□ -0.19
SREBF1-206	ENST00000423161	IGHV3-35	A0A0C4DH35	117 aa		13.84	□□□□□ -0.19
SREBF1-206	ENST00000423161	XRCC3	O43542	346 aa		13.84	□□□□□ -0.19
SREBF1-206	ENST00000423161	JTB	O76095	146 aa		13.84	□□□□□ -0.19
SREBF1-206	ENST00000423161	FGF2	P09038	288 aa		13.84	□□□□□ -0.19
SREBF1-206	ENST00000423161	GNRHR	P30968	328 aa		13.84	□□□□□ -0.19
SREBF1-206	ENST00000423161	ERVK-16	P61578	105 aa		13.84	□□□□□ -0.19
SREBF1-206	ENST00000423161	ANKRD55	Q3KP44	614 aa		13.84	□□□□□ -0.19
SREBF1-206	ENST00000423161	MARC2	Q969Z3	335 aa		13.84	□□□□□ -0.19
SREBF1-206	ENST00000423161	DNAH1	Q9P2D7	4330 aa		13.83	□□□□□ -0.19
SREBF1-206	ENST00000423161	MARCH11	A6NNE9	402 aa		13.83	□□□□□ -0.2
SREBF1-206	ENST00000423161	CYB5B	O43169	146 aa		13.83	□□□□□ -0.2
SREBF1-206	ENST00000423161	RLN1	P04808	185 aa		13.83	□□□□□ -0.2
SREBF1-206	ENST00000423161	TRAPPC2	P0DI81	140 aa		13.83	□□□□□ -0.2
SREBF1-206	ENST00000423161	TRAPPC2B	P0DI82	140 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms