RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 MARCH11A6NNE9 402 aa15.59■□□□□ 0.09
GTF3A-202ENST00000419181 NOL3O60936 208 aaKnown RBP15.59■□□□□ 0.09
GTF3A-202ENST00000419181 SAP30O75446 220 aa15.59■□□□□ 0.09
GTF3A-202ENST00000419181 TRBV12-3P01733 135 aa15.59■□□□□ 0.09
GTF3A-202ENST00000419181 CD3DP04234 171 aa15.59■□□□□ 0.09
GTF3A-202ENST00000419181 AREGP15514 252 aa15.59■□□□□ 0.09
GTF3A-202ENST00000419181 ECI1P42126 302 aa15.59■□□□□ 0.09
GTF3A-202ENST00000419181 OR2B8PP59922 312 aa15.59■□□□□ 0.09
GTF3A-202ENST00000419181 RNASE10Q5GAN6 216 aaKnown RBP15.59■□□□□ 0.09
GTF3A-202ENST00000419181 C19orf35Q6ZS72 473 aa15.59■□□□□ 0.09
GTF3A-202ENST00000419181 SLC38A6Q8IZM9 456 aa15.59■□□□□ 0.09
GTF3A-202ENST00000419181 ARRDC1Q8N5I2 433 aa15.59■□□□□ 0.09
GTF3A-202ENST00000419181 NECAP1Q8NC96 275 aa15.59■□□□□ 0.09
GTF3A-202ENST00000419181 DMBX1Q8NFW5 382 aa15.59■□□□□ 0.09
GTF3A-202ENST00000419181 PEF1Q9UBV8 284 aaKnown RBP15.59■□□□□ 0.09
GTF3A-202ENST00000419181 DPPA5A6NC42 116 aa15.58■□□□□ 0.08
GTF3A-202ENST00000419181 GABARAPH6UMI1 98 aa15.58■□□□□ 0.08
GTF3A-202ENST00000419181 CRYGCP07315 174 aa15.58■□□□□ 0.08
GTF3A-202ENST00000419181 LPAR6P43657 344 aa15.58■□□□□ 0.08
GTF3A-202ENST00000419181 ERVK-16P61578 105 aa15.58■□□□□ 0.08
GTF3A-202ENST00000419181 MRPS10P82664 201 aaKnown RBP15.58■□□□□ 0.08
GTF3A-202ENST00000419181 LHFPL1Q86WI0 220 aa15.58■□□□□ 0.08
GTF3A-202ENST00000419181 SLIRPQ9GZT3 109 aaKnown RBP15.58■□□□□ 0.08
GTF3A-202ENST00000419181 FAM212BQ9NTI7 297 aaPredicted RBP15.58■□□□□ 0.08
GTF3A-202ENST00000419181 ZNF256Q9Y2P7 627 aaPredicted RBP15.58■□□□□ 0.08
GTF3A-202ENST00000419181 OR2J3O76001 311 aa15.57■□□□□ 0.08
GTF3A-202ENST00000419181 CD74P04233 296 aa15.57■□□□□ 0.08
GTF3A-202ENST00000419181 IFNA6P05013 189 aa15.57■□□□□ 0.08
GTF3A-202ENST00000419181 RPA2P15927 270 aa15.57■□□□□ 0.08
GTF3A-202ENST00000419181 CTRB1P17538 263 aa15.57■□□□□ 0.08
GTF3A-202ENST00000419181 PSMB6P28072 239 aa15.57■□□□□ 0.08
GTF3A-202ENST00000419181 S100GP29377 79 aa15.57■□□□□ 0.08
GTF3A-202ENST00000419181 ATP5G2Q06055 141 aa15.57■□□□□ 0.08
GTF3A-202ENST00000419181 EXOSC2Q13868 293 aaKnown RBP15.57■□□□□ 0.08
GTF3A-202ENST00000419181 KLF5Q13887 457 aaPredicted RBP15.57■□□□□ 0.08
GTF3A-202ENST00000419181 KLK9Q2XQG4 91 aa15.57■□□□□ 0.08
GTF3A-202ENST00000419181 CTRB2Q6GPI1 263 aa15.57■□□□□ 0.08
GTF3A-202ENST00000419181 TBC1D26Q86UD7 250 aa15.57■□□□□ 0.08
GTF3A-202ENST00000419181 CADM3Q8N126 398 aa15.57■□□□□ 0.08
GTF3A-202ENST00000419181 PRR25Q96S07 402 aa15.57■□□□□ 0.08
GTF3A-202ENST00000419181 COMMD5Q9GZQ3 224 aa15.57■□□□□ 0.08
GTF3A-202ENST00000419181 KLK9Q9UKQ9 250 aa15.57■□□□□ 0.08
GTF3A-202ENST00000419181 KRASP01116 189 aa15.56■□□□□ 0.08
GTF3A-202ENST00000419181 TAS2R19P59542 299 aa15.56■□□□□ 0.08
GTF3A-202ENST00000419181 SSBP1Q04837 148 aaKnown RBP15.56■□□□□ 0.08
GTF3A-202ENST00000419181 DCTN2Q13561 401 aaKnown RBP15.56■□□□□ 0.08
GTF3A-202ENST00000419181 C15orf32Q32M92 178 aa15.56■□□□□ 0.08
GTF3A-202ENST00000419181 TMEM229BQ8NBD8 167 aa15.56■□□□□ 0.08
GTF3A-202ENST00000419181 OR4D10Q8NGI6 311 aa15.56■□□□□ 0.08
GTF3A-202ENST00000419181 SMIM4Q8WVI0 70 aa15.56■□□□□ 0.08
GTF3A-202ENST00000419181 DIRAS2Q96HU8 199 aa15.56■□□□□ 0.08
GTF3A-202ENST00000419181 FANCD2OSQ96PS1 177 aa15.56■□□□□ 0.08
GTF3A-202ENST00000419181 CEPT1Q9Y6K0 416 aa15.56■□□□□ 0.08
GTF3A-202ENST00000419181 IGLC7A0M8Q6 106 aa15.55■□□□□ 0.08
GTF3A-202ENST00000419181 DHFRP00374 187 aa15.55■□□□□ 0.08
GTF3A-202ENST00000419181 G6PCP35575 357 aa15.55■□□□□ 0.08
GTF3A-202ENST00000419181 OR4C12Q96R67 309 aa15.55■□□□□ 0.08
GTF3A-202ENST00000419181 SRSF8Q9BRL6 282 aaKnown RBP15.55■□□□□ 0.08
GTF3A-202ENST00000419181 QTRT1Q9BXR0 403 aaKnown RBP15.55■□□□□ 0.08
GTF3A-202ENST00000419181 C6orf62Q9GZU0 229 aaPredicted RBP15.55■□□□□ 0.08
GTF3A-202ENST00000419181 RABL2AQ9UBK7 228 aaPredicted RBP15.55■□□□□ 0.08
GTF3A-202ENST00000419181 RABL2BQ9UNT1 228 aa15.55■□□□□ 0.08
GTF3A-202ENST00000419181 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.54■□□□□ 0.08
GTF3A-202ENST00000419181 BMPR1BO00238 502 aa15.54■□□□□ 0.08
GTF3A-202ENST00000419181 CTDSPLO15194 276 aa15.54■□□□□ 0.08
GTF3A-202ENST00000419181 REG1AP05451 166 aa15.54■□□□□ 0.08
GTF3A-202ENST00000419181 SYNJ2BPP57105 145 aa15.54■□□□□ 0.08
GTF3A-202ENST00000419181 RND3P61587 244 aa15.54■□□□□ 0.08
GTF3A-202ENST00000419181 ZNF486Q96H40 463 aaPredicted RBP15.54■□□□□ 0.08
GTF3A-202ENST00000419181 ELOVL1Q9BW60 279 aa15.54■□□□□ 0.08
GTF3A-202ENST00000419181 FBXL7Q9UJT9 491 aa15.54■□□□□ 0.08
GTF3A-202ENST00000419181 LSM4Q9Y4Z0 139 aaKnown RBP15.54■□□□□ 0.08
GTF3A-202ENST00000419181 COL7A1Q02388 2944 aa15.54■□□□□ 0.08
GTF3A-202ENST00000419181 RAB3DO95716 219 aa15.53■□□□□ 0.08
GTF3A-202ENST00000419181 PTBP1P26599 531 aaKnown RBP eCLIP15.53■□□□□ 0.08
GTF3A-202ENST00000419181 IL18Q14116 193 aa15.53■□□□□ 0.08
GTF3A-202ENST00000419181 RPEL1Q2QD12 228 aa15.53■□□□□ 0.08
GTF3A-202ENST00000419181 FAM209BQ5JX69 171 aa15.53■□□□□ 0.08
GTF3A-202ENST00000419181 THOC7Q6I9Y2 204 aaKnown RBP15.53■□□□□ 0.08
GTF3A-202ENST00000419181 STEAP1BQ6NZ63 245 aa15.53■□□□□ 0.08
GTF3A-202ENST00000419181 OR9G4Q8NGQ1 327 aa15.53■□□□□ 0.08
GTF3A-202ENST00000419181 OR6Q1Q8NGQ2 317 aa15.53■□□□□ 0.08
GTF3A-202ENST00000419181 TERB2Q8NHR7 220 aa15.53■□□□□ 0.08
GTF3A-202ENST00000419181 NXF2Q9GZY0 626 aaKnown RBP15.53■□□□□ 0.08
GTF3A-202ENST00000419181 IGLV11-55A0A075B6I3 123 aa15.52■□□□□ 0.08
GTF3A-202ENST00000419181 TEX50A0A1B0GTY4 177 aa15.52■□□□□ 0.08
GTF3A-202ENST00000419181 NDUFB8O95169 186 aa15.52■□□□□ 0.08
GTF3A-202ENST00000419181 IGKV1-39P01597 117 aa15.52■□□□□ 0.08
GTF3A-202ENST00000419181 IGKV1D-39P04432 117 aa15.52■□□□□ 0.08
GTF3A-202ENST00000419181 PGAM2P15259 253 aa15.52■□□□□ 0.08
GTF3A-202ENST00000419181 HIST1H1BP16401 226 aaKnown RBP15.52■□□□□ 0.08
GTF3A-202ENST00000419181 PI3P19957 117 aa15.52■□□□□ 0.08
GTF3A-202ENST00000419181 PPP5CP53041 499 aa15.52■□□□□ 0.08
GTF3A-202ENST00000419181 IL34Q6ZMJ4 242 aa15.52■□□□□ 0.08
GTF3A-202ENST00000419181 OR10W1Q8NGF6 305 aa15.52■□□□□ 0.08
GTF3A-202ENST00000419181 OR1L8Q8NGR8 309 aa15.52■□□□□ 0.08
GTF3A-202ENST00000419181 SEC22AQ96IW7 307 aa15.52■□□□□ 0.08
GTF3A-202ENST00000419181 B9D2Q9BPU9 175 aa15.52■□□□□ 0.08
GTF3A-202ENST00000419181 NSG2Q9Y328 171 aa15.52■□□□□ 0.08
GTF3A-202ENST00000419181 DMRT1Q9Y5R6 373 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms