RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 HIST1H2BMQ99879 126 aa10.21□□□□□ -0.77
UBR4-205ENST00000417040 DCTN5Q9BTE1 182 aa10.21□□□□□ -0.77
UBR4-205ENST00000417040 VSIRQ9H7M9 311 aa10.21□□□□□ -0.77
UBR4-205ENST00000417040 LAMTOR2Q9Y2Q5 125 aa10.21□□□□□ -0.77
UBR4-205ENST00000417040 SELENOTP62341 195 aa10.21□□□□□ -0.77
UBR4-205ENST00000417040 GREM1O60565 184 aa10.21□□□□□ -0.77
UBR4-205ENST00000417040 SMIM10L1P0DMW3 83 aa10.21□□□□□ -0.77
UBR4-205ENST00000417040 MFAP4P55083 255 aa10.21□□□□□ -0.77
UBR4-205ENST00000417040 ZNF146Q15072 292 aa10.21□□□□□ -0.77
UBR4-205ENST00000417040 SMIM10Q96HG1 83 aa10.21□□□□□ -0.77
UBR4-205ENST00000417040 PSMG3Q9BT73 122 aaPredicted RBP10.21□□□□□ -0.77
UBR4-205ENST00000417040 UBE2CO00762 179 aa10.21□□□□□ -0.78
UBR4-205ENST00000417040 IGHV4-39P01824 125 aa10.21□□□□□ -0.78
UBR4-205ENST00000417040 LIPFP07098 398 aa10.21□□□□□ -0.78
UBR4-205ENST00000417040 FBLN7Q53RD9 439 aa10.21□□□□□ -0.78
UBR4-205ENST00000417040 FAM214BQ7L5A3 538 aa10.21□□□□□ -0.78
UBR4-205ENST00000417040 WBP1LQ9NX94 342 aa10.21□□□□□ -0.78
UBR4-205ENST00000417040 JKAMPQ9P055 326 aa10.21□□□□□ -0.78
UBR4-205ENST00000417040 M0R381 172 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 C18orf12Q96KH6 178 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 RFNGQ9Y644 331 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 FAM90A10PA6NDY2 464 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 FAM90A18PA6NE21 464 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 FAM90A16PA6NEW6 464 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 FAM90A20PA6NIJ5 464 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 FAM90A8PA6NJQ4 464 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 FAM90A7PA6NKC0 464 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 FAM90A22PA8MWA6 464 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 FAM90A12PA8MX19 464 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 FAM90A5PA8MXJ8 464 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 FAM90A23PA8MXZ1 464 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 VENTXO95231 258 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 FAM90A15PP0C7V4 464 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 FAM90A13PP0C7W8 464 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 FAM90A14PP0C7W9 464 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 FAM90A24PP0C7X0 464 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 ZNF124Q15973 351 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 NAA38Q9BRA0 125 aaKnown RBP10.2□□□□□ -0.78
UBR4-205ENST00000417040 PKIBQ9C010 78 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 DEPPQ9NTK1 212 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 TRAV24A0A0B4J272 114 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 C21orf140B9A014 251 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 A0A087WWC5 75 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 CCL21O00585 134 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 MC5RP33032 325 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 C19orf48Q6RUI8 117 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 MRAP2Q96G30 205 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 IGKV3D-20A0A0C4DH25 116 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 NKX2-8O15522 239 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 TIAF1O95411 115 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 LINC00614P0C842 121 aa10.2□□□□□ -0.78
UBR4-205ENST00000417040 H0YIZ8 118 aa10.19□□□□□ -0.78
UBR4-205ENST00000417040 PEX7O00628 323 aa10.19□□□□□ -0.78
UBR4-205ENST00000417040 FAM106CPP0CH98 169 aa10.19□□□□□ -0.78
UBR4-205ENST00000417040 CTHRC1Q96CG8 243 aa10.19□□□□□ -0.78
UBR4-205ENST00000417040 MRPL32Q9BYC8 188 aaKnown RBP10.19□□□□□ -0.78
UBR4-205ENST00000417040 MYO7AQ13402 2215 aa10.19□□□□□ -0.78
UBR4-205ENST00000417040 RRN3P1Q2M238 152 aa10.19□□□□□ -0.78
UBR4-205ENST00000417040 HIGD1CA8MV81 97 aa10.19□□□□□ -0.78
UBR4-205ENST00000417040 LEPP41159 167 aa10.19□□□□□ -0.78
UBR4-205ENST00000417040 TMEM170AQ8WVE7 144 aa10.19□□□□□ -0.78
UBR4-205ENST00000417040 JPT1Q9UK76 154 aa10.19□□□□□ -0.78
UBR4-205ENST00000417040 GPR183P32249 361 aa10.19□□□□□ -0.78
UBR4-205ENST00000417040 RPS20P60866 119 aaKnown RBP10.19□□□□□ -0.78
UBR4-205ENST00000417040 ZNF324BQ6AW86 544 aaPredicted RBP10.19□□□□□ -0.78
UBR4-205ENST00000417040 ZNF837Q96EG3 531 aaPredicted RBP10.19□□□□□ -0.78
UBR4-205ENST00000417040 NUDT11Q96G61 164 aa10.19□□□□□ -0.78
UBR4-205ENST00000417040 SPOCK3Q9BQ16 436 aa10.19□□□□□ -0.78
UBR4-205ENST00000417040 NHSL1Q5SYE7 1610 aa10.19□□□□□ -0.78
UBR4-205ENST00000417040 ZNF525Q8N782 197 aa10.19□□□□□ -0.78
UBR4-205ENST00000417040 FOXA2Q9Y261 457 aaPredicted RBP10.19□□□□□ -0.78
UBR4-205ENST00000417040 NPIPB6E9PJ23 425 aa10.18□□□□□ -0.78
UBR4-205ENST00000417040 TMEM250H0YL14 139 aa10.18□□□□□ -0.78
UBR4-205ENST00000417040 SLC25A45Q8N413 288 aa10.18□□□□□ -0.78
UBR4-205ENST00000417040 DEFB104AQ8WTQ1 72 aa10.18□□□□□ -0.78
UBR4-205ENST00000417040 NDUFAF3Q9BU61 184 aa10.18□□□□□ -0.78
UBR4-205ENST00000417040 TRAV12-3A0A0B4J271 114 aa10.18□□□□□ -0.78
UBR4-205ENST00000417040 IZUMO1RA6ND01 250 aa10.18□□□□□ -0.78
UBR4-205ENST00000417040 COX6A1P12074 109 aa10.18□□□□□ -0.78
UBR4-205ENST00000417040 LDLRAD2Q5SZI1 272 aa10.18□□□□□ -0.78
UBR4-205ENST00000417040 CCDC144NLQ6NUI1 221 aa10.18□□□□□ -0.78
UBR4-205ENST00000417040 SAXO1Q8IYX7 474 aa10.18□□□□□ -0.78
UBR4-205ENST00000417040 GFI1Q99684 422 aa10.18□□□□□ -0.78
UBR4-205ENST00000417040 RPP21Q9H633 154 aaKnown RBP10.18□□□□□ -0.78
UBR4-205ENST00000417040 PRR32B1ATL7 298 aa10.18□□□□□ -0.78
UBR4-205ENST00000417040 TGFBR3LH3BV60 316 aa10.18□□□□□ -0.78
UBR4-205ENST00000417040 CELA3AP09093 270 aa10.18□□□□□ -0.78
UBR4-205ENST00000417040 RFPL3SP0C7P2 107 aa10.18□□□□□ -0.78
UBR4-205ENST00000417040 PNKDQ8N490 385 aa10.18□□□□□ -0.78
UBR4-205ENST00000417040 ANKRD36A6QL64 1941 aa10.18□□□□□ -0.78
UBR4-205ENST00000417040 OR11H12B2RN74 326 aa10.18□□□□□ -0.78
UBR4-205ENST00000417040 TEX45Q8NA69 505 aa10.18□□□□□ -0.78
UBR4-205ENST00000417040 OR11H1Q8NG94 326 aa10.18□□□□□ -0.78
UBR4-205ENST00000417040 OR11H2Q8NH07 326 aa10.18□□□□□ -0.78
UBR4-205ENST00000417040 SCGB3A1Q96QR1 104 aa10.18□□□□□ -0.78
UBR4-205ENST00000417040 REPIN1Q9BWE0 567 aaKnown RBP10.18□□□□□ -0.78
UBR4-205ENST00000417040 PPIAL4CA0A0B4J2A2 164 aa10.18□□□□□ -0.78
UBR4-205ENST00000417040 RAMP3O60896 148 aa10.18□□□□□ -0.78
UBR4-205ENST00000417040 PPIAL4GP0DN37 164 aa10.18□□□□□ -0.78
UBR4-205ENST00000417040 AICDAQ9GZX7 198 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms