RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 PKD1L2Q7Z442 2459 aa16.83■□□□□ 0.29
USP39-203ENST00000409470 MBP02144 154 aa16.83■□□□□ 0.28
USP39-203ENST00000409470 NPY1RP25929 384 aa16.83■□□□□ 0.28
USP39-203ENST00000409470 ZNF137PP52743 207 aa16.83■□□□□ 0.28
USP39-203ENST00000409470 FGF8P55075 233 aaPredicted RBP16.83■□□□□ 0.28
USP39-203ENST00000409470 TMEM177Q53S58 311 aa16.83■□□□□ 0.28
USP39-203ENST00000409470 WDR25Q64LD2 544 aaPredicted RBP16.83■□□□□ 0.28
USP39-203ENST00000409470 SSX7Q7RTT5 188 aa16.83■□□□□ 0.28
USP39-203ENST00000409470 PDPNQ86YL7 162 aa16.83■□□□□ 0.28
USP39-203ENST00000409470 OR4C13Q8NGP0 309 aa16.83■□□□□ 0.28
USP39-203ENST00000409470 GGACTQ9BVM4 153 aa16.83■□□□□ 0.28
USP39-203ENST00000409470 PLEKHA3Q9HB20 300 aa16.83■□□□□ 0.28
USP39-203ENST00000409470 GNG13Q9P2W3 67 aa16.83■□□□□ 0.28
USP39-203ENST00000409470 MDKP21741 143 aaPredicted RBP16.82■□□□□ 0.28
USP39-203ENST00000409470 TMEM170AQ8WVE7 144 aa16.82■□□□□ 0.28
USP39-203ENST00000409470 SLC39A9Q9NUM3 307 aa16.82■□□□□ 0.28
USP39-203ENST00000409470 WDR83OSQ9Y284 106 aa16.82■□□□□ 0.28
USP39-203ENST00000409470 WASHC3Q9Y3C0 194 aa16.82■□□□□ 0.28
USP39-203ENST00000409470 MALRD1Q5VYJ5 2156 aa16.82■□□□□ 0.28
USP39-203ENST00000409470 MAP1LC3B2A6NCE7 125 aa16.82■□□□□ 0.28
USP39-203ENST00000409470 PRRX1P54821 245 aa16.82■□□□□ 0.28
USP39-203ENST00000409470 PRCDQ00LT1 54 aa16.82■□□□□ 0.28
USP39-203ENST00000409470 AKIRIN2Q53H80 203 aa16.82■□□□□ 0.28
USP39-203ENST00000409470 ZNF506Q5JVG8 444 aa16.82■□□□□ 0.28
USP39-203ENST00000409470 DTX2Q86UW9 622 aa16.82■□□□□ 0.28
USP39-203ENST00000409470 RPP25LQ8N5L8 163 aaKnown RBP16.82■□□□□ 0.28
USP39-203ENST00000409470 RXFP4Q8TDU9 374 aa16.82■□□□□ 0.28
USP39-203ENST00000409470 MAP1LC3BQ9GZQ8 125 aa16.82■□□□□ 0.28
USP39-203ENST00000409470 LRBAP50851 2863 aa16.81■□□□□ 0.28
USP39-203ENST00000409470 IGHV2-26A0A0B4J1V2 119 aa16.81■□□□□ 0.28
USP39-203ENST00000409470 TEX50A0A1B0GTY4 177 aa16.81■□□□□ 0.28
USP39-203ENST00000409470 IGKV1D-33P01593 117 aa16.81■□□□□ 0.28
USP39-203ENST00000409470 IGKV1-33P01594 117 aa16.81■□□□□ 0.28
USP39-203ENST00000409470 AGAP20933 346 aa16.81■□□□□ 0.28
USP39-203ENST00000409470 RAB13P51153 203 aa16.81■□□□□ 0.28
USP39-203ENST00000409470 DLX1P56177 255 aa16.81■□□□□ 0.28
USP39-203ENST00000409470 ICAM4Q14773 271 aa16.81■□□□□ 0.28
USP39-203ENST00000409470 CBLN2Q8IUK8 224 aa16.81■□□□□ 0.28
USP39-203ENST00000409470 OR10G4Q8NGN3 311 aa16.81■□□□□ 0.28
USP39-203ENST00000409470 OR10G9Q8NGN4 311 aa16.81■□□□□ 0.28
USP39-203ENST00000409470 OR10G7Q8NGN6 311 aa16.81■□□□□ 0.28
USP39-203ENST00000409470 TNFRSF14Q92956 283 aa16.81■□□□□ 0.28
USP39-203ENST00000409470 PCGF1Q9BSM1 259 aa16.81■□□□□ 0.28
USP39-203ENST00000409470 PRSS46E5RG02 174 aa16.8■□□□□ 0.28
USP39-203ENST00000409470 CA2P00918 260 aa16.8■□□□□ 0.28
USP39-203ENST00000409470 DLK1P80370 383 aa16.8■□□□□ 0.28
USP39-203ENST00000409470 PRB3Q04118 309 aaPredicted RBP16.8■□□□□ 0.28
USP39-203ENST00000409470 SOHLH1Q5JUK2 328 aa16.8■□□□□ 0.28
USP39-203ENST00000409470 ZFP92A6NM28 416 aa16.8■□□□□ 0.28
USP39-203ENST00000409470 EIF3GO75821 320 aaKnown RBP eCLIP16.8■□□□□ 0.28
USP39-203ENST00000409470 CEBPGP53567 150 aa16.8■□□□□ 0.28
USP39-203ENST00000409470 OR5B3Q8NH48 314 aa16.8■□□□□ 0.28
USP39-203ENST00000409470 CLEC7AQ9BXN2 247 aa16.8■□□□□ 0.28
USP39-203ENST00000409470 hCG_1809904A0A1W2PP81 198 aa16.79■□□□□ 0.28
USP39-203ENST00000409470 A0A1W2PPE2 198 aa16.79■□□□□ 0.28
USP39-203ENST00000409470 A0A1W2PPR1 153 aa16.79■□□□□ 0.28
USP39-203ENST00000409470 A0A1W2PR64 198 aa16.79■□□□□ 0.28
USP39-203ENST00000409470 A0A1W2PRV1 198 aa16.79■□□□□ 0.28
USP39-203ENST00000409470 MPDU1O75352 247 aa16.79■□□□□ 0.28
USP39-203ENST00000409470 HSPB1P04792 205 aaKnown RBP16.79■□□□□ 0.28
USP39-203ENST00000409470 MC5RP33032 325 aa16.79■□□□□ 0.28
USP39-203ENST00000409470 KHDC3LQ587J8 217 aa16.79■□□□□ 0.28
USP39-203ENST00000409470 C8orf46Q8TAG6 207 aa16.79■□□□□ 0.28
USP39-203ENST00000409470 COMMD5Q9GZQ3 224 aa16.79■□□□□ 0.28
USP39-203ENST00000409470 SLC25A22Q9H936 323 aa16.79■□□□□ 0.28
USP39-203ENST00000409470 CHODLQ9H9P2 273 aa16.79■□□□□ 0.28
USP39-203ENST00000409470 UBTD1Q9HAC8 227 aa16.79■□□□□ 0.28
USP39-203ENST00000409470 ONECUT1Q9UBC0 465 aa16.79■□□□□ 0.28
USP39-203ENST00000409470 LOC102723971A0A1B0GUV8 181 aa16.79■□□□□ 0.28
USP39-203ENST00000409470 M0R036 132 aa16.79■□□□□ 0.28
USP39-203ENST00000409470 RBP4P02753 201 aa16.79■□□□□ 0.28
USP39-203ENST00000409470 SRP19P09132 144 aaKnown RBP16.79■□□□□ 0.28
USP39-203ENST00000409470 RPL8P62917 257 aaKnown RBP16.79■□□□□ 0.28
USP39-203ENST00000409470 TREML4Q6UXN2 200 aa16.79■□□□□ 0.28
USP39-203ENST00000409470 VSTM2AQ8TAG5 236 aa16.79■□□□□ 0.28
USP39-203ENST00000409470 ACTR3CQ9C0K3 210 aaPredicted RBP16.79■□□□□ 0.28
USP39-203ENST00000409470 UNKLQ9H9P5 680 aaKnown RBP16.79■□□□□ 0.28
USP39-203ENST00000409470 CTXND1A0A1B0GTU2 59 aa16.78■□□□□ 0.28
USP39-203ENST00000409470 ENSAO43768 121 aaKnown RBP16.78■□□□□ 0.28
USP39-203ENST00000409470 LIPFP07098 398 aa16.78■□□□□ 0.28
USP39-203ENST00000409470 USF1P22415 310 aaPredicted RBP16.78■□□□□ 0.28
USP39-203ENST00000409470 COX7A1P24310 79 aa16.78■□□□□ 0.28
USP39-203ENST00000409470 HLA-DRB5Q30154 266 aa16.78■□□□□ 0.28
USP39-203ENST00000409470 FAM122CQ6P4D5 195 aa16.78■□□□□ 0.28
USP39-203ENST00000409470 HMGB3O15347 200 aaKnown RBP16.77■□□□□ 0.28
USP39-203ENST00000409470 FBP1P09467 338 aa16.77■□□□□ 0.28
USP39-203ENST00000409470 ATF4P18848 351 aaPredicted RBP16.77■□□□□ 0.28
USP39-203ENST00000409470 PLA2G5P39877 138 aa16.77■□□□□ 0.28
USP39-203ENST00000409470 ACOT6Q3I5F7 207 aaPredicted RBP16.77■□□□□ 0.28
USP39-203ENST00000409470 OR4A5Q8NH83 315 aa16.77■□□□□ 0.28
USP39-203ENST00000409470 HRNRQ86YZ3 2850 aaPredicted RBP16.77■□□□□ 0.27
USP39-203ENST00000409470 IGHV3-72A0A0B4J1Y9 119 aa16.77■□□□□ 0.27
USP39-203ENST00000409470 IGLV1-47P01700 117 aa16.77■□□□□ 0.27
USP39-203ENST00000409470 BCL2P10415 239 aa16.77■□□□□ 0.27
USP39-203ENST00000409470 CDKN1AP38936 164 aa16.77■□□□□ 0.27
USP39-203ENST00000409470 AWAT1Q58HT5 328 aa16.77■□□□□ 0.27
USP39-203ENST00000409470 C20orf24Q9BUV8 137 aa16.77■□□□□ 0.27
USP39-203ENST00000409470 NPVFQ9HCQ7 196 aa16.77■□□□□ 0.27
USP39-203ENST00000409470 TNCP24821 2201 aa16.76■□□□□ 0.27
USP39-203ENST00000409470 C22orf46C9J442 243 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms