RNA–Protein interactions for RNA: ENST00000409148.1

LRRTM1-202, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LRRTM1, Length 2,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-202ENST00000409148 TMEM200BQ69YZ2 307 aa14.11□□□□□ -0.15
LRRTM1-202ENST00000409148 LINC01560Q8TB33 94 aa14.11□□□□□ -0.15
LRRTM1-202ENST00000409148 ZCCHC14Q8WYQ9 949 aaKnown RBP14.11□□□□□ -0.15
LRRTM1-202ENST00000409148 FOXA2Q9Y261 457 aaPredicted RBP14.11□□□□□ -0.15
LRRTM1-202ENST00000409148 YLPM1P49750 1951 aaKnown RBP14.11□□□□□ -0.15
LRRTM1-202ENST00000409148 MAP1LC3B2A6NCE7 125 aa14.11□□□□□ -0.15
LRRTM1-202ENST00000409148 PAX1P15863 534 aa14.11□□□□□ -0.15
LRRTM1-202ENST00000409148 DDTP30046 118 aa14.11□□□□□ -0.15
LRRTM1-202ENST00000409148 PKIAP61925 76 aa14.11□□□□□ -0.15
LRRTM1-202ENST00000409148 LYPD2Q6UXB3 125 aa14.11□□□□□ -0.15
LRRTM1-202ENST00000409148 OR10D4PQ8NGN7 298 aa14.11□□□□□ -0.15
LRRTM1-202ENST00000409148 NPCDR1Q9BY65 106 aa14.11□□□□□ -0.15
LRRTM1-202ENST00000409148 MAP1LC3BQ9GZQ8 125 aa14.11□□□□□ -0.15
LRRTM1-202ENST00000409148 SLC35D1Q9NTN3 355 aa14.11□□□□□ -0.15
LRRTM1-202ENST00000409148 SLC39A9Q9NUM3 307 aa14.11□□□□□ -0.15
LRRTM1-202ENST00000409148 CISD1Q9NZ45 108 aaKnown RBP14.11□□□□□ -0.15
LRRTM1-202ENST00000409148 CXorf65A6NEN9 183 aa14.1□□□□□ -0.15
LRRTM1-202ENST00000409148 IFNA1P01562 189 aa14.1□□□□□ -0.15
LRRTM1-202ENST00000409148 CT45A6P0DMU7 189 aa14.1□□□□□ -0.15
LRRTM1-202ENST00000409148 CT45A5P0DMU8 189 aa14.1□□□□□ -0.15
LRRTM1-202ENST00000409148 CT45A7P0DMV0 189 aa14.1□□□□□ -0.15
LRRTM1-202ENST00000409148 BCL2P10415 239 aa14.1□□□□□ -0.15
LRRTM1-202ENST00000409148 CCL3L1P16619 93 aa14.1□□□□□ -0.15
LRRTM1-202ENST00000409148 MDKP21741 143 aaPredicted RBP14.1□□□□□ -0.15
LRRTM1-202ENST00000409148 TFF3Q07654 80 aa14.1□□□□□ -0.15
LRRTM1-202ENST00000409148 ACSM6Q6P461 480 aa14.1□□□□□ -0.15
LRRTM1-202ENST00000409148 ZNF833PQ6ZTB9 187 aa14.1□□□□□ -0.15
LRRTM1-202ENST00000409148 SSX7Q7RTT5 188 aa14.1□□□□□ -0.15
LRRTM1-202ENST00000409148 OR10G4Q8NGN3 311 aa14.1□□□□□ -0.15
LRRTM1-202ENST00000409148 TMEM14BQ9NUH8 114 aa14.1□□□□□ -0.15
LRRTM1-202ENST00000409148 DVL1O14640 695 aa14.09□□□□□ -0.15
LRRTM1-202ENST00000409148 FCN3O75636 299 aa14.09□□□□□ -0.15
LRRTM1-202ENST00000409148 CD1BP29016 333 aa14.09□□□□□ -0.15
LRRTM1-202ENST00000409148 HSPE1P61604 102 aaKnown RBP14.09□□□□□ -0.15
LRRTM1-202ENST00000409148 RAB11AP62491 216 aa14.09□□□□□ -0.15
LRRTM1-202ENST00000409148 LBHQ53QV2 105 aaPredicted RBP14.09□□□□□ -0.15
LRRTM1-202ENST00000409148 FFAR4Q5NUL3 377 aa14.09□□□□□ -0.15
LRRTM1-202ENST00000409148 C2orf88Q9BSF0 95 aa14.09□□□□□ -0.15
LRRTM1-202ENST00000409148 ZFP92A6NM28 416 aa14.09□□□□□ -0.15
LRRTM1-202ENST00000409148 CEBPGP53567 150 aa14.09□□□□□ -0.15
LRRTM1-202ENST00000409148 FGF8P55075 233 aaPredicted RBP14.09□□□□□ -0.15
LRRTM1-202ENST00000409148 GAMTQ14353 236 aa14.09□□□□□ -0.15
LRRTM1-202ENST00000409148 HNF4GQ14541 408 aa14.09□□□□□ -0.15
LRRTM1-202ENST00000409148 RPP25LQ8N5L8 163 aaKnown RBP14.09□□□□□ -0.15
LRRTM1-202ENST00000409148 CYB561D1Q8N8Q1 229 aa14.09□□□□□ -0.15
LRRTM1-202ENST00000409148 OR13D1Q8NGV5 346 aa14.09□□□□□ -0.15
LRRTM1-202ENST00000409148 ENY2Q9NPA8 101 aa14.09□□□□□ -0.15
LRRTM1-202ENST00000409148 CTSZQ9UBR2 303 aa14.09□□□□□ -0.15
LRRTM1-202ENST00000409148 PRNDQ9UKY0 176 aa14.09□□□□□ -0.15
LRRTM1-202ENST00000409148 PUS1Q9Y606 427 aaKnown RBP eCLIP14.09□□□□□ -0.15
LRRTM1-202ENST00000409148 CTXND1A0A1B0GTU2 59 aa14.08□□□□□ -0.16
LRRTM1-202ENST00000409148 SOX15O60248 233 aa14.08□□□□□ -0.16
LRRTM1-202ENST00000409148 PLAUP00749 431 aa14.08□□□□□ -0.16
LRRTM1-202ENST00000409148 PMS2P11Q13670 270 aa14.08□□□□□ -0.16
LRRTM1-202ENST00000409148 UNQ6494/PRO21346Q6UXR6 183 aa14.08□□□□□ -0.16
LRRTM1-202ENST00000409148 SPNS3Q6ZMD2 512 aa14.08□□□□□ -0.16
LRRTM1-202ENST00000409148 OR10G9Q8NGN4 311 aa14.08□□□□□ -0.16
LRRTM1-202ENST00000409148 OR10G7Q8NGN6 311 aa14.08□□□□□ -0.16
LRRTM1-202ENST00000409148 LHX4Q969G2 390 aa14.08□□□□□ -0.16
LRRTM1-202ENST00000409148 WDR83OSQ9Y284 106 aa14.08□□□□□ -0.16
LRRTM1-202ENST00000409148 MPDU1O75352 247 aa14.08□□□□□ -0.16
LRRTM1-202ENST00000409148 IGKV1D-33P01593 117 aa14.08□□□□□ -0.16
LRRTM1-202ENST00000409148 IGKV1-33P01594 117 aa14.08□□□□□ -0.16
LRRTM1-202ENST00000409148 APOA2P02652 100 aa14.08□□□□□ -0.16
LRRTM1-202ENST00000409148 SSX2Q16385 188 aa14.08□□□□□ -0.16
LRRTM1-202ENST00000409148 HIST3H2BBQ8N257 126 aa14.08□□□□□ -0.16
LRRTM1-202ENST00000409148 MUC15Q8N387 334 aa14.08□□□□□ -0.16
LRRTM1-202ENST00000409148 C8orf31Q8N9H6 132 aa14.08□□□□□ -0.16
LRRTM1-202ENST00000409148 ELOA3CA0A087WX78 387 aaPredicted RBP14.07□□□□□ -0.16
LRRTM1-202ENST00000409148 A0A087X0M5 115 aa14.07□□□□□ -0.16
LRRTM1-202ENST00000409148 A0A1B0GX30 115 aa14.07□□□□□ -0.16
LRRTM1-202ENST00000409148 RRHO14718 337 aa14.07□□□□□ -0.16
LRRTM1-202ENST00000409148 HIST1H2BKO60814 126 aa14.07□□□□□ -0.16
LRRTM1-202ENST00000409148 HIST1H2BJP06899 126 aa14.07□□□□□ -0.16
LRRTM1-202ENST00000409148 HIST1H2BOP23527 126 aa14.07□□□□□ -0.16
LRRTM1-202ENST00000409148 LOXP28300 417 aaPredicted RBP14.07□□□□□ -0.16
LRRTM1-202ENST00000409148 HIST1H2BBP33778 126 aa14.07□□□□□ -0.16
LRRTM1-202ENST00000409148 HIST1H2BDP58876 126 aa14.07□□□□□ -0.16
LRRTM1-202ENST00000409148 ERVFRD-1P60508 538 aa14.07□□□□□ -0.16
LRRTM1-202ENST00000409148 HIST1H2BCP62807 126 aa14.07□□□□□ -0.16
LRRTM1-202ENST00000409148 DLK1P80370 383 aa14.07□□□□□ -0.16
LRRTM1-202ENST00000409148 HIST2H2BEQ16778 126 aa14.07□□□□□ -0.16
LRRTM1-202ENST00000409148 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.07□□□□□ -0.16
LRRTM1-202ENST00000409148 HIST1H2BHQ93079 126 aa14.07□□□□□ -0.16
LRRTM1-202ENST00000409148 P2RX4Q99571 388 aa14.07□□□□□ -0.16
LRRTM1-202ENST00000409148 HIST1H2BNQ99877 126 aa14.07□□□□□ -0.16
LRRTM1-202ENST00000409148 HIST1H2BMQ99879 126 aa14.07□□□□□ -0.16
LRRTM1-202ENST00000409148 ACTR3CQ9C0K3 210 aaPredicted RBP14.07□□□□□ -0.16
LRRTM1-202ENST00000409148 ZNRD1Q9P1U0 126 aa14.07□□□□□ -0.16
LRRTM1-202ENST00000409148 TET2Q6N021 2002 aaPredicted RBP14.06□□□□□ -0.16
LRRTM1-202ENST00000409148 SMCO3A2RU48 225 aa14.06□□□□□ -0.16
LRRTM1-202ENST00000409148 H3BQ15 152 aa14.06□□□□□ -0.16
LRRTM1-202ENST00000409148 SOD3P08294 240 aa14.06□□□□□ -0.16
LRRTM1-202ENST00000409148 GRNP28799 593 aaKnown RBP14.06□□□□□ -0.16
LRRTM1-202ENST00000409148 ADORA2A-AS1P86434 159 aa14.06□□□□□ -0.16
LRRTM1-202ENST00000409148 ACOT6Q3I5F7 207 aaPredicted RBP14.06□□□□□ -0.16
LRRTM1-202ENST00000409148 FAM71F2Q6NXP2 309 aa14.06□□□□□ -0.16
LRRTM1-202ENST00000409148 NEU1Q99519 415 aa14.06□□□□□ -0.16
LRRTM1-202ENST00000409148 NIPSNAP3BQ9BS92 247 aa14.06□□□□□ -0.16
LRRTM1-202ENST00000409148 VAX2Q9UIW0 290 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms