RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 OR2B8PP59922 312 aa6.51□□□□□ -1.37
BRCC3-205ENST00000399026 CNPY1Q3B7I2 92 aa6.51□□□□□ -1.37
BRCC3-205ENST00000399026 LPCAT3Q6P1A2 487 aa6.51□□□□□ -1.37
BRCC3-205ENST00000399026 MMD2Q8IY49 270 aa6.51□□□□□ -1.37
BRCC3-205ENST00000399026 MINDY2Q8NBR6 621 aa6.51□□□□□ -1.37
BRCC3-205ENST00000399026 OR4F17Q8NGA8 305 aa6.51□□□□□ -1.37
BRCC3-205ENST00000399026 VSTM2AQ8TAG5 236 aa6.51□□□□□ -1.37
BRCC3-205ENST00000399026 TMEM167AQ8TBQ9 72 aa6.51□□□□□ -1.37
BRCC3-205ENST00000399026 MS4A10Q96PG2 267 aa6.51□□□□□ -1.37
BRCC3-205ENST00000399026 OR2A7Q96R45 310 aa6.51□□□□□ -1.37
BRCC3-205ENST00000399026 OR4F4Q96R69 305 aa6.51□□□□□ -1.37
BRCC3-205ENST00000399026 ALX4Q9H161 411 aaPredicted RBP6.51□□□□□ -1.37
BRCC3-205ENST00000399026 ZNF355PQ9NSJ1 428 aa6.51□□□□□ -1.37
BRCC3-205ENST00000399026 COMMD9Q9P000 198 aa6.51□□□□□ -1.37
BRCC3-205ENST00000399026 MEGF8Q7Z7M0 2845 aa6.51□□□□□ -1.37
BRCC3-205ENST00000399026 A0A1B0GW64 132 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 HMX3A6NHT5 357 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 MSGN1A6NI15 193 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 ACTL6BO94805 426 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 KRASP01116 189 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 IGKV1-39P01597 117 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 IGHV3-11P01762 117 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 IGKV1D-39P04432 117 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 CTSDP07339 412 aaPredicted RBP6.5□□□□□ -1.37
BRCC3-205ENST00000399026 NQO2P16083 231 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 ETV6P41212 452 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 TPPP2P59282 170 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 ERVK-16P61578 105 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 RND3P61587 244 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 RPL8P62917 257 aaKnown RBP6.5□□□□□ -1.37
BRCC3-205ENST00000399026 ZNF585BQ52M93 769 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 TRIQKQ629K1 86 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 ZNF57Q68EA5 555 aaPredicted RBP6.5□□□□□ -1.37
BRCC3-205ENST00000399026 TMEM65Q6PI78 240 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 C1QL4Q86Z23 238 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 ZNF695Q8IW36 515 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 TOMM5Q8N4H5 51 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 TCTEX1D1Q8N7M0 179 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 RNF152Q8N8N0 203 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 OR5T1Q8NG75 326 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 TERB2Q8NHR7 220 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 MYOZ3Q8TDC0 251 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 CD300LFQ8TDQ1 290 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 ZNF486Q96H40 463 aaPredicted RBP6.5□□□□□ -1.37
BRCC3-205ENST00000399026 FYTTD1Q96QD9 318 aaKnown RBP6.5□□□□□ -1.37
BRCC3-205ENST00000399026 TP53RKQ96S44 253 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 SDHCQ99643 169 aaPredicted RBP6.5□□□□□ -1.37
BRCC3-205ENST00000399026 PRRT1Q99946 306 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 PLEKHA2Q9HB19 425 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 COA4Q9NYJ1 87 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 BET1LQ9NYM9 111 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 COPZ2Q9P299 210 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 C14orf166Q9Y224 244 aaKnown RBP6.5□□□□□ -1.37
BRCC3-205ENST00000399026 VSIG4Q9Y279 399 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 NSG2Q9Y328 171 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 NUBP2Q9Y5Y2 271 aa6.5□□□□□ -1.37
BRCC3-205ENST00000399026 LINC00854A0A1B0GVQ3 168 aa6.49□□□□□ -1.37
BRCC3-205ENST00000399026 TEX22C9J3V5 150 aa6.49□□□□□ -1.37
BRCC3-205ENST00000399026 E7EUB6 86 aa6.49□□□□□ -1.37
BRCC3-205ENST00000399026 H0Y980 276 aa6.49□□□□□ -1.37
BRCC3-205ENST00000399026 UPK2O00526 184 aa6.49□□□□□ -1.37
BRCC3-205ENST00000399026 PRH1P02810 166 aa6.49□□□□□ -1.37
BRCC3-205ENST00000399026 TRGV3P03979 118 aa6.49□□□□□ -1.37
BRCC3-205ENST00000399026 REG1AP05451 166 aa6.49□□□□□ -1.37
BRCC3-205ENST00000399026 IL6RP08887 468 aaPredicted RBP6.49□□□□□ -1.37
BRCC3-205ENST00000399026 OR9G9P0C7N8 305 aa6.49□□□□□ -1.37
BRCC3-205ENST00000399026 AREGP15514 252 aa6.49□□□□□ -1.37
BRCC3-205ENST00000399026 HLA-GP17693 338 aa6.49□□□□□ -1.37
BRCC3-205ENST00000399026 PTBP1P26599 531 aaKnown RBP eCLIP6.49□□□□□ -1.37
BRCC3-205ENST00000399026 RPL27AP46776 148 aaKnown RBP6.49□□□□□ -1.37
BRCC3-205ENST00000399026 RAB9AP51151 201 aa6.49□□□□□ -1.37
BRCC3-205ENST00000399026 RAB25P57735 213 aa6.49□□□□□ -1.37
BRCC3-205ENST00000399026 TMEM267Q0VDI3 215 aaPredicted RBP6.49□□□□□ -1.37
BRCC3-205ENST00000399026 KIAA0141Q14154 515 aaPredicted RBP6.49□□□□□ -1.37
BRCC3-205ENST00000399026 BAK1Q16611 211 aa6.49□□□□□ -1.37
BRCC3-205ENST00000399026 POU2AF1Q16633 256 aa6.49□□□□□ -1.37
BRCC3-205ENST00000399026 SP6Q3SY56 376 aa6.49□□□□□ -1.37
BRCC3-205ENST00000399026 AKIRIN2Q53H80 203 aa6.49□□□□□ -1.37
BRCC3-205ENST00000399026 ZNF491Q8N8L2 437 aa6.49□□□□□ -1.37
BRCC3-205ENST00000399026 CCDC71LQ8N9Z2 235 aa6.49□□□□□ -1.37
BRCC3-205ENST00000399026 ADAD2Q8NCV1 583 aaKnown RBP6.49□□□□□ -1.37
BRCC3-205ENST00000399026 OR5M8Q8NGP6 311 aa6.49□□□□□ -1.37
BRCC3-205ENST00000399026 ZFAND1Q8TCF1 268 aa6.49□□□□□ -1.37
BRCC3-205ENST00000399026 C4orf3Q8WVX3 66 aa6.49□□□□□ -1.37
BRCC3-205ENST00000399026 RAX2Q96IS3 184 aa6.49□□□□□ -1.37
BRCC3-205ENST00000399026 RTBDNQ9BSG5 229 aaPredicted RBP6.49□□□□□ -1.37
BRCC3-205ENST00000399026 C5orf66Q9H5L9 145 aa6.49□□□□□ -1.37
BRCC3-205ENST00000399026 SLC2A8Q9NY64 477 aa6.49□□□□□ -1.37
BRCC3-205ENST00000399026 PRR13Q9NZ81 148 aa6.49□□□□□ -1.37
BRCC3-205ENST00000399026 TNCP24821 2201 aa6.49□□□□□ -1.37
BRCC3-205ENST00000399026 DNAH3Q8TD57 4116 aa6.48□□□□□ -1.37
BRCC3-205ENST00000399026 C3orf85A0A1B0GTC6 90 aa6.48□□□□□ -1.37
BRCC3-205ENST00000399026 CGB1A6NKQ9 187 aa6.48□□□□□ -1.37
BRCC3-205ENST00000399026 G3V4G9 280 aa6.48□□□□□ -1.37
BRCC3-205ENST00000399026 RBMXL2O75526 392 aaKnown RBP6.48□□□□□ -1.37
BRCC3-205ENST00000399026 SERPINE2P07093 398 aa6.48□□□□□ -1.37
BRCC3-205ENST00000399026 OR5AC1P0C628 307 aa6.48□□□□□ -1.37
BRCC3-205ENST00000399026 FAUP35544 74 aaKnown RBP6.48□□□□□ -1.37
BRCC3-205ENST00000399026 ECI1P42126 302 aa6.48□□□□□ -1.37
BRCC3-205ENST00000399026 CDX1P47902 265 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms