RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 ZDHHC16Q969W1 377 aa12.24□□□□□ -0.45
SCAF11-204ENST00000395454 TMEM186Q96B77 213 aa12.24□□□□□ -0.45
SCAF11-204ENST00000395454 SCRT1Q9BWW7 348 aa12.24□□□□□ -0.45
SCAF11-204ENST00000395454 TGFAP01135 160 aa12.23□□□□□ -0.45
SCAF11-204ENST00000395454 IGHV4-31P0DP07 118 aa12.23□□□□□ -0.45
SCAF11-204ENST00000395454 CAMLGP49069 296 aa12.23□□□□□ -0.45
SCAF11-204ENST00000395454 SLC38A11Q08AI6 406 aa12.23□□□□□ -0.45
SCAF11-204ENST00000395454 SPNS3Q6ZMD2 512 aa12.23□□□□□ -0.45
SCAF11-204ENST00000395454 TMEM182Q6ZP80 229 aaPredicted RBP12.23□□□□□ -0.45
SCAF11-204ENST00000395454 VKORC1L1Q8N0U8 176 aa12.23□□□□□ -0.45
SCAF11-204ENST00000395454 OR4A16Q8NH70 328 aa12.23□□□□□ -0.45
SCAF11-204ENST00000395454 PINX1Q96BK5 328 aaKnown RBP12.23□□□□□ -0.45
SCAF11-204ENST00000395454 AIFM2Q9BRQ8 373 aa12.23□□□□□ -0.45
SCAF11-204ENST00000395454 PCGF1Q9BSM1 259 aa12.23□□□□□ -0.45
SCAF11-204ENST00000395454 ZNRD1Q9P1U0 126 aa12.23□□□□□ -0.45
SCAF11-204ENST00000395454 MAST4O15021 2626 aa12.23□□□□□ -0.45
SCAF11-204ENST00000395454 C15orf62A8K5M9 175 aa12.23□□□□□ -0.45
SCAF11-204ENST00000395454 H0YJW9 148 aa12.23□□□□□ -0.45
SCAF11-204ENST00000395454 ENSAO43768 121 aaKnown RBP12.23□□□□□ -0.45
SCAF11-204ENST00000395454 MDKP21741 143 aaPredicted RBP12.23□□□□□ -0.45
SCAF11-204ENST00000395454 FHITP49789 147 aa12.23□□□□□ -0.45
SCAF11-204ENST00000395454 OR2B8PP59922 312 aa12.23□□□□□ -0.45
SCAF11-204ENST00000395454 RUNX1Q01196 453 aa12.23□□□□□ -0.45
SCAF11-204ENST00000395454 LY6G5BQ8NDX9 201 aa12.23□□□□□ -0.45
SCAF11-204ENST00000395454 OSR1Q8TAX0 266 aaPredicted RBP12.23□□□□□ -0.45
SCAF11-204ENST00000395454 MRPL20Q9BYC9 149 aaKnown RBP12.23□□□□□ -0.45
SCAF11-204ENST00000395454 WDR61Q9GZS3 305 aaKnown RBP12.23□□□□□ -0.45
SCAF11-204ENST00000395454 TMEM133Q9H2Q1 129 aa12.23□□□□□ -0.45
SCAF11-204ENST00000395454 SLC35D1Q9NTN3 355 aa12.23□□□□□ -0.45
SCAF11-204ENST00000395454 HIF1ANQ9NWT6 349 aa12.23□□□□□ -0.45
SCAF11-204ENST00000395454 ZNF257Q9Y2Q1 563 aa12.23□□□□□ -0.45
SCAF11-204ENST00000395454 TIMM9Q9Y5J7 89 aa12.23□□□□□ -0.45
SCAF11-204ENST00000395454 TNCP24821 2201 aa12.22□□□□□ -0.45
SCAF11-204ENST00000395454 TRAV3A0A0B4J244 114 aa12.22□□□□□ -0.45
SCAF11-204ENST00000395454 IGHV2-70DA0A0C4DH43 119 aa12.22□□□□□ -0.45
SCAF11-204ENST00000395454 A0A1B0GW64 132 aa12.22□□□□□ -0.45
SCAF11-204ENST00000395454 CEBPZOSA8MTT3 80 aa12.22□□□□□ -0.45
SCAF11-204ENST00000395454 IGKV1-16P04430 117 aa12.22□□□□□ -0.45
SCAF11-204ENST00000395454 LIPFP07098 398 aa12.22□□□□□ -0.45
SCAF11-204ENST00000395454 SRSF3P84103 164 aaKnown RBP12.22□□□□□ -0.45
SCAF11-204ENST00000395454 TMEM177Q53S58 311 aa12.22□□□□□ -0.45
SCAF11-204ENST00000395454 SSX9Q7RTT3 188 aa12.22□□□□□ -0.45
SCAF11-204ENST00000395454 LFNGQ8NES3 379 aa12.22□□□□□ -0.45
SCAF11-204ENST00000395454 OR13D1Q8NGV5 346 aa12.22□□□□□ -0.45
SCAF11-204ENST00000395454 C1orf159Q96HA4 380 aa12.22□□□□□ -0.45
SCAF11-204ENST00000395454 TMEM147Q9BVK8 224 aa12.22□□□□□ -0.45
SCAF11-204ENST00000395454 BET1LQ9NYM9 111 aa12.22□□□□□ -0.45
SCAF11-204ENST00000395454 ONECUT1Q9UBC0 465 aa12.22□□□□□ -0.45
SCAF11-204ENST00000395454 POLR3KQ9Y2Y1 108 aaPredicted RBP12.22□□□□□ -0.45
SCAF11-204ENST00000395454 HIVEP1P15822 2718 aa12.22□□□□□ -0.45
SCAF11-204ENST00000395454 A0A1W2PPH5 198 aa12.21□□□□□ -0.45
SCAF11-204ENST00000395454 RBMXL2O75526 392 aaKnown RBP12.21□□□□□ -0.45
SCAF11-204ENST00000395454 IGLV1-47P01700 117 aa12.21□□□□□ -0.45
SCAF11-204ENST00000395454 SNCAP37840 140 aa12.21□□□□□ -0.45
SCAF11-204ENST00000395454 SERF2P84101 59 aa12.21□□□□□ -0.45
SCAF11-204ENST00000395454 PAX2Q02962 417 aa12.21□□□□□ -0.45
SCAF11-204ENST00000395454 CYB5R2Q6BCY4 276 aa12.21□□□□□ -0.45
SCAF11-204ENST00000395454 LILRB2Q8N423 598 aa12.21□□□□□ -0.45
SCAF11-204ENST00000395454 NABP2Q9BQ15 211 aa12.21□□□□□ -0.45
SCAF11-204ENST00000395454 TCF19Q9Y242 345 aa12.21□□□□□ -0.45
SCAF11-204ENST00000395454 CARHSP1Q9Y2V2 147 aaKnown RBP12.21□□□□□ -0.45
SCAF11-204ENST00000395454 RFNGQ9Y644 331 aa12.21□□□□□ -0.45
SCAF11-204ENST00000395454 TRAV1-1A0A0B4J248 108 aa12.21□□□□□ -0.46
SCAF11-204ENST00000395454 BTBD17A6NE02 478 aa12.21□□□□□ -0.46
SCAF11-204ENST00000395454 TSPAN15O95858 294 aa12.21□□□□□ -0.46
SCAF11-204ENST00000395454 IFNA17P01571 189 aa12.21□□□□□ -0.46
SCAF11-204ENST00000395454 APOA2P02652 100 aa12.21□□□□□ -0.46
SCAF11-204ENST00000395454 PRH1P02810 166 aa12.21□□□□□ -0.46
SCAF11-204ENST00000395454 ADCYAP1P18509 176 aa12.21□□□□□ -0.46
SCAF11-204ENST00000395454 DVL1P1P54792 670 aaPredicted RBP12.21□□□□□ -0.46
SCAF11-204ENST00000395454 HSPE1P61604 102 aaKnown RBP12.21□□□□□ -0.46
SCAF11-204ENST00000395454 ARF6P62330 175 aa12.21□□□□□ -0.46
SCAF11-204ENST00000395454 ZNF616Q08AN1 781 aa12.21□□□□□ -0.46
SCAF11-204ENST00000395454 PDPNQ86YL7 162 aa12.21□□□□□ -0.46
SCAF11-204ENST00000395454 OR10X1Q8NGY0 326 aa12.21□□□□□ -0.46
SCAF11-204ENST00000395454 SCGB1C1Q8TD33 95 aa12.21□□□□□ -0.46
SCAF11-204ENST00000395454 UQCC1Q9NVA1 299 aa12.21□□□□□ -0.46
SCAF11-204ENST00000395454 PRNDQ9UKY0 176 aa12.21□□□□□ -0.46
SCAF11-204ENST00000395454 TRAV20A0A0B4J274 112 aa12.2□□□□□ -0.46
SCAF11-204ENST00000395454 PRSS46E5RG02 174 aa12.2□□□□□ -0.46
SCAF11-204ENST00000395454 UPK2O00526 184 aa12.2□□□□□ -0.46
SCAF11-204ENST00000395454 THNSL2Q86YJ6 484 aa12.2□□□□□ -0.46
SCAF11-204ENST00000395454 ABHD12Q8N2K0 398 aa12.2□□□□□ -0.46
SCAF11-204ENST00000395454 BEND2Q8NDZ0 799 aa12.2□□□□□ -0.46
SCAF11-204ENST00000395454 OR10P1Q8NGE3 313 aa12.2□□□□□ -0.46
SCAF11-204ENST00000395454 FAM213BQ8TBF2 198 aa12.2□□□□□ -0.46
SCAF11-204ENST00000395454 TAF15Q92804 592 aaKnown RBP eCLIP12.2□□□□□ -0.46
SCAF11-204ENST00000395454 GGACTQ9BVM4 153 aa12.2□□□□□ -0.46
SCAF11-204ENST00000395454 SRRM4A7MD48 611 aaKnown RBP12.19□□□□□ -0.46
SCAF11-204ENST00000395454 RPP30P78346 268 aaKnown RBP12.19□□□□□ -0.46
SCAF11-204ENST00000395454 SPSB3Q6PJ21 355 aa12.19□□□□□ -0.46
SCAF11-204ENST00000395454 SEC11CQ9BY50 192 aa12.19□□□□□ -0.46
SCAF11-204ENST00000395454 INSIG2Q9Y5U4 225 aa12.19□□□□□ -0.46
SCAF11-204ENST00000395454 IGHV2-26A0A0B4J1V2 119 aa12.19□□□□□ -0.46
SCAF11-204ENST00000395454 RNASEK-C17orf49H0YIS7 233 aa12.19□□□□□ -0.46
SCAF11-204ENST00000395454 M6PRP20645 277 aa12.19□□□□□ -0.46
SCAF11-204ENST00000395454 IL3RAP26951 378 aa12.19□□□□□ -0.46
SCAF11-204ENST00000395454 AKR1C8PQ5T2L2 129 aa12.19□□□□□ -0.46
SCAF11-204ENST00000395454 OR8G2PQ6IF36 304 aa12.19□□□□□ -0.46
SCAF11-204ENST00000395454 CD99P14209 185 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms