RNA–Protein interactions for RNA: ENST00000394945.5

SPOCK1-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOCK1, Length 4,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-202ENST00000394945 RPL27AP46776 148 aaKnown RBP13.22□□□□□ -0.29
SPOCK1-202ENST00000394945 IGLV3-21P80748 117 aaPredicted RBP13.22□□□□□ -0.29
SPOCK1-202ENST00000394945 FAM169BQ8N8A8 192 aa13.22□□□□□ -0.29
SPOCK1-202ENST00000394945 NEUROG1Q92886 237 aa13.22□□□□□ -0.29
SPOCK1-202ENST00000394945 C18orf15Q96N68 181 aa13.22□□□□□ -0.29
SPOCK1-202ENST00000394945 MRPL32Q9BYC8 188 aaKnown RBP13.22□□□□□ -0.29
SPOCK1-202ENST00000394945 RNASE7Q9H1E1 156 aaKnown RBP13.22□□□□□ -0.29
SPOCK1-202ENST00000394945 MYOFQ9NZM1 2061 aa13.22□□□□□ -0.29
SPOCK1-202ENST00000394945 IZUMO1RA6ND01 250 aa13.22□□□□□ -0.29
SPOCK1-202ENST00000394945 GOSR1O95249 250 aa13.22□□□□□ -0.29
SPOCK1-202ENST00000394945 TSPAN7P41732 249 aa13.22□□□□□ -0.29
SPOCK1-202ENST00000394945 OCC1Q8TAD7 63 aa13.22□□□□□ -0.29
SPOCK1-202ENST00000394945 IGKV1D-8A0A087WSZ0 117 aa13.21□□□□□ -0.29
SPOCK1-202ENST00000394945 UMODP07911 640 aa13.21□□□□□ -0.29
SPOCK1-202ENST00000394945 LHFPL1Q86WI0 220 aa13.21□□□□□ -0.29
SPOCK1-202ENST00000394945 PNKDQ8N490 385 aa13.21□□□□□ -0.29
SPOCK1-202ENST00000394945 ZNF418Q8TF45 676 aaPredicted RBP13.21□□□□□ -0.29
SPOCK1-202ENST00000394945 TYMSP04818 313 aa13.21□□□□□ -0.29
SPOCK1-202ENST00000394945 SRSF4Q08170 494 aaKnown RBP13.21□□□□□ -0.29
SPOCK1-202ENST00000394945 PRSS2P07478 247 aa13.21□□□□□ -0.3
SPOCK1-202ENST00000394945 DCAF10Q5QP82 559 aa13.21□□□□□ -0.3
SPOCK1-202ENST00000394945 FAM89BQ8N5H3 189 aa13.21□□□□□ -0.3
SPOCK1-202ENST00000394945 SNHG12Q9BXW3 62 aa13.21□□□□□ -0.3
SPOCK1-202ENST00000394945 WNT5BQ9H1J7 359 aa13.21□□□□□ -0.3
SPOCK1-202ENST00000394945 VSIRQ9H7M9 311 aa13.21□□□□□ -0.3
SPOCK1-202ENST00000394945 MRPL16Q9NX20 251 aaKnown RBP13.21□□□□□ -0.3
SPOCK1-202ENST00000394945 TRAV17A0A0B4J275 112 aa13.2□□□□□ -0.3
SPOCK1-202ENST00000394945 CEACAM3P40198 252 aa13.2□□□□□ -0.3
SPOCK1-202ENST00000394945 TFF2Q03403 129 aa13.2□□□□□ -0.3
SPOCK1-202ENST00000394945 MST1LQ2TV78 715 aa13.2□□□□□ -0.3
SPOCK1-202ENST00000394945 TEX38Q6PEX7 206 aa13.2□□□□□ -0.3
SPOCK1-202ENST00000394945 PRDM14Q9GZV8 571 aa13.2□□□□□ -0.3
SPOCK1-202ENST00000394945 TMEM160Q9NX00 188 aa13.2□□□□□ -0.3
SPOCK1-202ENST00000394945 INO80CQ6PI98 192 aaPredicted RBP13.2□□□□□ -0.3
SPOCK1-202ENST00000394945 GOLT1AQ6ZVE7 132 aa13.2□□□□□ -0.3
SPOCK1-202ENST00000394945 MAFAQ8NHW3 353 aaPredicted RBP13.2□□□□□ -0.3
SPOCK1-202ENST00000394945 TRAV1-1A0A0B4J248 108 aa13.2□□□□□ -0.3
SPOCK1-202ENST00000394945 A0A1W2PQF6 199 aa13.2□□□□□ -0.3
SPOCK1-202ENST00000394945 LRTM2Q8N967 370 aa13.2□□□□□ -0.3
SPOCK1-202ENST00000394945 NPIPB3Q92617 1050 aa13.2□□□□□ -0.3
SPOCK1-202ENST00000394945 C10orf128Q5T292 105 aa13.19□□□□□ -0.3
SPOCK1-202ENST00000394945 FAM131CQ96AQ9 280 aa13.19□□□□□ -0.3
SPOCK1-202ENST00000394945 MS4A5Q9H3V2 200 aa13.19□□□□□ -0.3
SPOCK1-202ENST00000394945 SCN8AQ9UQD0 1980 aa13.19□□□□□ -0.3
SPOCK1-202ENST00000394945 A0A0A6YYD4 124 aa13.19□□□□□ -0.3
SPOCK1-202ENST00000394945 IGKV1-9A0A0C4DH69 117 aa13.19□□□□□ -0.3
SPOCK1-202ENST00000394945 MKRN2OSH3BPM6 223 aa13.19□□□□□ -0.3
SPOCK1-202ENST00000394945 M0QZ24 198 aa13.19□□□□□ -0.3
SPOCK1-202ENST00000394945 IGHV3-48P01763 117 aa13.19□□□□□ -0.3
SPOCK1-202ENST00000394945 KLK15Q9H2R5 256 aa13.19□□□□□ -0.3
SPOCK1-202ENST00000394945 RFNGQ9Y644 331 aa13.19□□□□□ -0.3
SPOCK1-202ENST00000394945 IGKV1D-13A0A0B4J2D9 117 aa13.19□□□□□ -0.3
SPOCK1-202ENST00000394945 HIGD1CA8MV81 97 aa13.19□□□□□ -0.3
SPOCK1-202ENST00000394945 RBFOX2O43251 390 aaKnown RBP eCLIP13.19□□□□□ -0.3
SPOCK1-202ENST00000394945 IGKV3-11P04433 115 aa13.19□□□□□ -0.3
SPOCK1-202ENST00000394945 IGKV1-13P0DP09 117 aa13.19□□□□□ -0.3
SPOCK1-202ENST00000394945 C1orf174Q8IYL3 243 aa13.19□□□□□ -0.3
SPOCK1-202ENST00000394945 ZNF501Q96CX3 271 aaPredicted RBP13.19□□□□□ -0.3
SPOCK1-202ENST00000394945 EAF1Q96JC9 268 aaPredicted RBP13.19□□□□□ -0.3
SPOCK1-202ENST00000394945 GNB1LQ9BYB4 327 aa13.19□□□□□ -0.3
SPOCK1-202ENST00000394945 HIST1H1AQ02539 215 aaPredicted RBP13.19□□□□□ -0.3
SPOCK1-202ENST00000394945 TPTE2P1Q5T6R2 138 aa13.19□□□□□ -0.3
SPOCK1-202ENST00000394945 PCSK4Q6UW60 755 aa13.19□□□□□ -0.3
SPOCK1-202ENST00000394945 TMEM108Q6UXF1 575 aa13.19□□□□□ -0.3
SPOCK1-202ENST00000394945 OR5A1Q8NGJ0 315 aa13.19□□□□□ -0.3
SPOCK1-202ENST00000394945 ZNF714Q96N38 554 aa13.19□□□□□ -0.3
SPOCK1-202ENST00000394945 SSBP4Q9BWG4 385 aaPredicted RBP13.19□□□□□ -0.3
SPOCK1-202ENST00000394945 CD55P08174 381 aa13.18□□□□□ -0.3
SPOCK1-202ENST00000394945 OR10J3Q5JRS4 329 aa13.18□□□□□ -0.3
SPOCK1-202ENST00000394945 KHDC1LQ5JSQ8 128 aa13.18□□□□□ -0.3
SPOCK1-202ENST00000394945 MRPL52Q86TS9 123 aaKnown RBP13.18□□□□□ -0.3
SPOCK1-202ENST00000394945 IGFBP2P18065 325 aa13.18□□□□□ -0.3
SPOCK1-202ENST00000394945 ZNF788Q6ZQV5 615 aa13.18□□□□□ -0.3
SPOCK1-202ENST00000394945 CLEC1BQ9P126 229 aa13.18□□□□□ -0.3
SPOCK1-202ENST00000394945 TCFL5Q9UL49 500 aa13.18□□□□□ -0.3
SPOCK1-202ENST00000394945 SELENOKQ9Y6D0 94 aa13.18□□□□□ -0.3
SPOCK1-202ENST00000394945 DIDO1Q9BTC0 2240 aaKnown RBP13.18□□□□□ -0.3
SPOCK1-202ENST00000394945 ANKRD36A6QL64 1941 aa13.18□□□□□ -0.3
SPOCK1-202ENST00000394945 A0A1B0GUT8 65 aa13.18□□□□□ -0.3
SPOCK1-202ENST00000394945 CCL4P13236 92 aa13.18□□□□□ -0.3
SPOCK1-202ENST00000394945 UCP2P55851 309 aa13.18□□□□□ -0.3
SPOCK1-202ENST00000394945 ORAOV1Q8WV07 137 aa13.18□□□□□ -0.3
SPOCK1-202ENST00000394945 C17orf98A8MV24 154 aa13.18□□□□□ -0.3
SPOCK1-202ENST00000394945 FOXL1Q12952 345 aa13.18□□□□□ -0.3
SPOCK1-202ENST00000394945 PRELID3AQ96N28 172 aa13.18□□□□□ -0.3
SPOCK1-202ENST00000394945 ST20Q9HBF5 79 aa13.18□□□□□ -0.3
SPOCK1-202ENST00000394945 PEX7O00628 323 aa13.17□□□□□ -0.3
SPOCK1-202ENST00000394945 IGHV2-5P01817 119 aa13.17□□□□□ -0.3
SPOCK1-202ENST00000394945 SCGB1A1P11684 91 aa13.17□□□□□ -0.3
SPOCK1-202ENST00000394945 DEFB109BQ30KR1 87 aa13.17□□□□□ -0.3
SPOCK1-202ENST00000394945 OSTCQ9NRP0 149 aa13.17□□□□□ -0.3
SPOCK1-202ENST00000394945 TDRD6O60522 2096 aaKnown RBP13.17□□□□□ -0.3
SPOCK1-202ENST00000394945 GCSAMQ8N6F7 178 aa13.17□□□□□ -0.3
SPOCK1-202ENST00000394945 ELOVL5Q9NYP7 299 aa13.17□□□□□ -0.3
SPOCK1-202ENST00000394945 MYO16Q9Y6X6 1858 aa13.17□□□□□ -0.3
SPOCK1-202ENST00000394945 PLXNB2O15031 1838 aa13.17□□□□□ -0.3
SPOCK1-202ENST00000394945 RPS20P60866 119 aaKnown RBP13.17□□□□□ -0.3
SPOCK1-202ENST00000394945 SEC11AP67812 179 aa13.17□□□□□ -0.3
SPOCK1-202ENST00000394945 NHP2Q9NX24 153 aaKnown RBP13.17□□□□□ -0.3
SPOCK1-202ENST00000394945 CELA2AP08217 269 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms