RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 WNT5BQ9H1J7 359 aa16.72■□□□□ 0.27
SHANK1-203ENST00000391813 PAQR4Q8N4S7 273 aaPredicted RBP16.72■□□□□ 0.27
SHANK1-203ENST00000391813 A0A1W2PRS3 328 aa16.71■□□□□ 0.27
SHANK1-203ENST00000391813 PRR32B1ATL7 298 aa16.71■□□□□ 0.27
SHANK1-203ENST00000391813 ZNF324O75467 553 aaPredicted RBP16.71■□□□□ 0.27
SHANK1-203ENST00000391813 TMEM54Q969K7 222 aa16.71■□□□□ 0.27
SHANK1-203ENST00000391813 RTN4RQ9BZR6 473 aa16.71■□□□□ 0.27
SHANK1-203ENST00000391813 SCO2A0A1W2PP80 73 aa16.71■□□□□ 0.27
SHANK1-203ENST00000391813 LGALS7P47929 136 aa16.71■□□□□ 0.27
SHANK1-203ENST00000391813 FOXA3P55318 350 aaPredicted RBP16.71■□□□□ 0.27
SHANK1-203ENST00000391813 C5orf30Q96GV9 206 aa16.71■□□□□ 0.27
SHANK1-203ENST00000391813 CDX4O14627 284 aaPredicted RBP16.71■□□□□ 0.27
SHANK1-203ENST00000391813 RND2P52198 227 aa16.71■□□□□ 0.27
SHANK1-203ENST00000391813 TMEM30BQ3MIR4 351 aa16.71■□□□□ 0.27
SHANK1-203ENST00000391813 ANKRD36A6QL64 1941 aa16.71■□□□□ 0.26
SHANK1-203ENST00000391813 A0A1W2PPE3 182 aa16.7■□□□□ 0.26
SHANK1-203ENST00000391813 IZUMO1RA6ND01 250 aa16.7■□□□□ 0.26
SHANK1-203ENST00000391813 ADMP35318 185 aa16.7■□□□□ 0.26
SHANK1-203ENST00000391813 UCP2P55851 309 aa16.7■□□□□ 0.26
SHANK1-203ENST00000391813 ZNF441Q8N8Z8 693 aa16.7■□□□□ 0.26
SHANK1-203ENST00000391813 AICDAQ9GZX7 198 aa16.7■□□□□ 0.26
SHANK1-203ENST00000391813 F11RQ9Y624 299 aaKnown RBP16.7■□□□□ 0.26
SHANK1-203ENST00000391813 J3QW42 95 aa16.7■□□□□ 0.26
SHANK1-203ENST00000391813 IL4P05112 153 aa16.7■□□□□ 0.26
SHANK1-203ENST00000391813 OR4D5Q8NGN0 318 aa16.7■□□□□ 0.26
SHANK1-203ENST00000391813 NEU1Q99519 415 aa16.7■□□□□ 0.26
SHANK1-203ENST00000391813 WFDC1Q9HC57 220 aa16.7■□□□□ 0.26
SHANK1-203ENST00000391813 CLEC5AQ9NY25 188 aa16.7■□□□□ 0.26
SHANK1-203ENST00000391813 THSD7BQ9C0I4 1608 aa16.7■□□□□ 0.26
SHANK1-203ENST00000391813 RRHO14718 337 aa16.7■□□□□ 0.26
SHANK1-203ENST00000391813 ADCYAP1P18509 176 aa16.7■□□□□ 0.26
SHANK1-203ENST00000391813 FAM131CQ96AQ9 280 aa16.7■□□□□ 0.26
SHANK1-203ENST00000391813 KLRB1Q12918 225 aa16.7■□□□□ 0.26
SHANK1-203ENST00000391813 LDLRAD2Q5SZI1 272 aa16.7■□□□□ 0.26
SHANK1-203ENST00000391813 TTC9CQ8N5M4 171 aa16.7■□□□□ 0.26
SHANK1-203ENST00000391813 JKAMPQ9P055 326 aa16.7■□□□□ 0.26
SHANK1-203ENST00000391813 C1QTNF9BB2RNN3 333 aa16.69■□□□□ 0.26
SHANK1-203ENST00000391813 FAM19A2Q8N3H0 131 aa16.69■□□□□ 0.26
SHANK1-203ENST00000391813 ST6GALNAC3Q8NDV1 305 aa16.69■□□□□ 0.26
SHANK1-203ENST00000391813 PLAUP00749 431 aa16.69■□□□□ 0.26
SHANK1-203ENST00000391813 AREGP15514 252 aa16.69■□□□□ 0.26
SHANK1-203ENST00000391813 OR10J3Q5JRS4 329 aa16.69■□□□□ 0.26
SHANK1-203ENST00000391813 VCX2Q9H322 139 aa16.69■□□□□ 0.26
SHANK1-203ENST00000391813 COX6A1P12074 109 aa16.69■□□□□ 0.26
SHANK1-203ENST00000391813 ZNF714Q96N38 554 aa16.69■□□□□ 0.26
SHANK1-203ENST00000391813 hCG_38984A0A1B0GV85 526 aa16.69■□□□□ 0.26
SHANK1-203ENST00000391813 GNB1LQ9BYB4 327 aa16.69■□□□□ 0.26
SHANK1-203ENST00000391813 MS4A5Q9H3V2 200 aa16.69■□□□□ 0.26
SHANK1-203ENST00000391813 ZDHHC16Q969W1 377 aa16.68■□□□□ 0.26
SHANK1-203ENST00000391813 GPR183P32249 361 aa16.68■□□□□ 0.26
SHANK1-203ENST00000391813 PCOLCEQ15113 449 aa16.68■□□□□ 0.26
SHANK1-203ENST00000391813 DERL1Q9BUN8 251 aa16.68■□□□□ 0.26
SHANK1-203ENST00000391813 OSTCQ9NRP0 149 aa16.68■□□□□ 0.26
SHANK1-203ENST00000391813 GDF9O60383 454 aa16.68■□□□□ 0.26
SHANK1-203ENST00000391813 TFF3Q07654 80 aa16.68■□□□□ 0.26
SHANK1-203ENST00000391813 IGKV1D-43A0A0B4J1Z2 117 aa16.68■□□□□ 0.26
SHANK1-203ENST00000391813 A0A1B0GW15 77 aa16.68■□□□□ 0.26
SHANK1-203ENST00000391813 OR11H12B2RN74 326 aa16.68■□□□□ 0.26
SHANK1-203ENST00000391813 CCL1P22362 96 aa16.68■□□□□ 0.26
SHANK1-203ENST00000391813 C3AR1Q16581 482 aa16.68■□□□□ 0.26
SHANK1-203ENST00000391813 OR11H1Q8NG94 326 aa16.68■□□□□ 0.26
SHANK1-203ENST00000391813 OR11H2Q8NH07 326 aa16.68■□□□□ 0.26
SHANK1-203ENST00000391813 CALYQ9NYX4 217 aa16.68■□□□□ 0.26
SHANK1-203ENST00000391813 MGPP08493 103 aa16.67■□□□□ 0.26
SHANK1-203ENST00000391813 C2orf83Q53S99 150 aa16.67■□□□□ 0.26
SHANK1-203ENST00000391813 LCTP09848 1927 aa16.67■□□□□ 0.26
SHANK1-203ENST00000391813 SCN5AQ14524 2016 aa16.67■□□□□ 0.26
SHANK1-203ENST00000391813 PPIHO43447 177 aaKnown RBP16.67■□□□□ 0.26
SHANK1-203ENST00000391813 CGAP01215 116 aa16.67■□□□□ 0.26
SHANK1-203ENST00000391813 LINC00271P0C7V0 271 aa16.67■□□□□ 0.26
SHANK1-203ENST00000391813 SUPT4H1P63272 117 aaKnown RBP16.67■□□□□ 0.26
SHANK1-203ENST00000391813 FOXL1Q12952 345 aa16.67■□□□□ 0.26
SHANK1-203ENST00000391813 LDLRAD4O15165 306 aa16.67■□□□□ 0.26
SHANK1-203ENST00000391813 SLC25A17O43808 307 aa16.67■□□□□ 0.26
SHANK1-203ENST00000391813 OR5A1Q8NGJ0 315 aa16.67■□□□□ 0.26
SHANK1-203ENST00000391813 C1QTNF9P0C862 333 aa16.66■□□□□ 0.26
SHANK1-203ENST00000391813 MMDQ15546 238 aa16.66■□□□□ 0.26
SHANK1-203ENST00000391813 PPP1R32Q7Z5V6 425 aa16.66■□□□□ 0.26
SHANK1-203ENST00000391813 FAM214BQ7L5A3 538 aa16.66■□□□□ 0.26
SHANK1-203ENST00000391813 TFPI2P48307 235 aa16.66■□□□□ 0.26
SHANK1-203ENST00000391813 GBF1Q92538 1859 aa16.66■□□□□ 0.26
SHANK1-203ENST00000391813 C17orf51A8MQB3 221 aa16.66■□□□□ 0.26
SHANK1-203ENST00000391813 FAM166AQ6J272 317 aa16.66■□□□□ 0.26
SHANK1-203ENST00000391813 TCF23Q7RTU1 214 aa16.66■□□□□ 0.26
SHANK1-203ENST00000391813 ST6GALNAC6Q969X2 333 aa16.66■□□□□ 0.26
SHANK1-203ENST00000391813 CACNA1DQ01668 2161 aa16.66■□□□□ 0.26
SHANK1-203ENST00000391813 TDRD6O60522 2096 aaKnown RBP16.65■□□□□ 0.26
SHANK1-203ENST00000391813 A0A087WV48 116 aa16.65■□□□□ 0.26
SHANK1-203ENST00000391813 A0A1B0GWB2 263 aa16.65■□□□□ 0.26
SHANK1-203ENST00000391813 ZNF788Q6ZQV5 615 aa16.65■□□□□ 0.26
SHANK1-203ENST00000391813 ST20Q9HBF5 79 aa16.65■□□□□ 0.26
SHANK1-203ENST00000391813 RLFQ13129 1914 aa16.65■□□□□ 0.26
SHANK1-203ENST00000391813 C7orf71A4D174 169 aa16.65■□□□□ 0.26
SHANK1-203ENST00000391813 LYL1P12980 280 aa16.65■□□□□ 0.26
SHANK1-203ENST00000391813 PCSK4Q6UW60 755 aa16.65■□□□□ 0.26
SHANK1-203ENST00000391813 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.65■□□□□ 0.26
SHANK1-203ENST00000391813 TMEM171Q8WVE6 324 aa16.65■□□□□ 0.26
SHANK1-203ENST00000391813 OR5P3Q8WZ94 311 aa16.65■□□□□ 0.26
SHANK1-203ENST00000391813 IGHV3OR15-7A0A075B7D8 119 aa16.65■□□□□ 0.26
SHANK1-203ENST00000391813 PRR19A6NJB7 356 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms