RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 ADAM5Q6NVV9 412 aa17.65■□□□□ 0.42
TRIM54-202ENST00000380075 TGIF2LYQ8IUE0 185 aa17.65■□□□□ 0.42
TRIM54-202ENST00000380075 PSMG3-AS1Q96PY0 264 aa17.65■□□□□ 0.42
TRIM54-202ENST00000380075 SLC25A22Q9H936 323 aa17.65■□□□□ 0.42
TRIM54-202ENST00000380075 TANC2Q9HCD6 1990 aa17.65■□□□□ 0.42
TRIM54-202ENST00000380075 DSCAML1Q8TD84 2053 aa17.65■□□□□ 0.42
TRIM54-202ENST00000380075 USP9YO00507 2555 aaPredicted RBP17.64■□□□□ 0.42
TRIM54-202ENST00000380075 MEF2BQ02080 365 aaPredicted RBP17.64■□□□□ 0.41
TRIM54-202ENST00000380075 RTL8BQ17RB0 113 aa17.64■□□□□ 0.41
TRIM54-202ENST00000380075 TMEM249Q2WGJ8 235 aa17.64■□□□□ 0.41
TRIM54-202ENST00000380075 WFIKKN1Q96NZ8 548 aa17.64■□□□□ 0.41
TRIM54-202ENST00000380075 KCNIP2Q9NS61 270 aa17.64■□□□□ 0.41
TRIM54-202ENST00000380075 PRNDQ9UKY0 176 aa17.64■□□□□ 0.41
TRIM54-202ENST00000380075 RAI1Q7Z5J4 1906 aaPredicted RBP17.64■□□□□ 0.41
TRIM54-202ENST00000380075 DYSFO75923 2080 aa17.64■□□□□ 0.41
TRIM54-202ENST00000380075 TRAV3A0A0B4J244 114 aa17.64■□□□□ 0.41
TRIM54-202ENST00000380075 PRSS46E5RG02 174 aa17.64■□□□□ 0.41
TRIM54-202ENST00000380075 TMEM250H0YL14 139 aa17.64■□□□□ 0.41
TRIM54-202ENST00000380075 GNG10P50151 68 aa17.64■□□□□ 0.41
TRIM54-202ENST00000380075 RPL31P62899 125 aaKnown RBP17.64■□□□□ 0.41
TRIM54-202ENST00000380075 HEPN1Q6WQI6 88 aa17.64■□□□□ 0.41
TRIM54-202ENST00000380075 ENY2Q9NPA8 101 aa17.64■□□□□ 0.41
TRIM54-202ENST00000380075 TMEM242Q9NWH2 141 aa17.64■□□□□ 0.41
TRIM54-202ENST00000380075 SEC14L6B5MCN3 397 aa17.63■□□□□ 0.41
TRIM54-202ENST00000380075 RPS16P62249 146 aaKnown RBP17.63■□□□□ 0.41
TRIM54-202ENST00000380075 NCMAPQ5T1S8 102 aa17.63■□□□□ 0.41
TRIM54-202ENST00000380075 C1QL4Q86Z23 238 aa17.63■□□□□ 0.41
TRIM54-202ENST00000380075 ZFP82Q8N141 532 aa17.63■□□□□ 0.41
TRIM54-202ENST00000380075 Q8N7P7 452 aa17.63■□□□□ 0.41
TRIM54-202ENST00000380075 RAB1CQ92928 201 aa17.63■□□□□ 0.41
TRIM54-202ENST00000380075 RAB24Q969Q5 203 aa17.63■□□□□ 0.41
TRIM54-202ENST00000380075 MS4A5Q9H3V2 200 aa17.63■□□□□ 0.41
TRIM54-202ENST00000380075 TMEM106BQ9NUM4 274 aa17.63■□□□□ 0.41
TRIM54-202ENST00000380075 ZNF257Q9Y2Q1 563 aa17.63■□□□□ 0.41
TRIM54-202ENST00000380075 MMP23AO75900 390 aa17.62■□□□□ 0.41
TRIM54-202ENST00000380075 OPRK1P41145 380 aa17.62■□□□□ 0.41
TRIM54-202ENST00000380075 LINC01560Q8TB33 94 aa17.62■□□□□ 0.41
TRIM54-202ENST00000380075 C2CD4CQ8TF44 421 aa17.62■□□□□ 0.41
TRIM54-202ENST00000380075 ZNF714Q96N38 554 aa17.62■□□□□ 0.41
TRIM54-202ENST00000380075 RRHO14718 337 aa17.62■□□□□ 0.41
TRIM54-202ENST00000380075 IL6RP08887 468 aaPredicted RBP17.62■□□□□ 0.41
TRIM54-202ENST00000380075 CDC34P49427 236 aaPredicted RBP17.62■□□□□ 0.41
TRIM54-202ENST00000380075 ZNF833PQ6ZTB9 187 aa17.62■□□□□ 0.41
TRIM54-202ENST00000380075 SDF2L1Q9HCN8 221 aa17.62■□□□□ 0.41
TRIM54-202ENST00000380075 SLC35D1Q9NTN3 355 aa17.62■□□□□ 0.41
TRIM54-202ENST00000380075 hCG_1809904A0A1W2PP81 198 aa17.61■□□□□ 0.41
TRIM54-202ENST00000380075 A0A1W2PR64 198 aa17.61■□□□□ 0.41
TRIM54-202ENST00000380075 A0A1W2PRV1 198 aa17.61■□□□□ 0.41
TRIM54-202ENST00000380075 SHISA9B4DS77 424 aa17.61■□□□□ 0.41
TRIM54-202ENST00000380075 CT45A6P0DMU7 189 aa17.61■□□□□ 0.41
TRIM54-202ENST00000380075 CT45A5P0DMU8 189 aa17.61■□□□□ 0.41
TRIM54-202ENST00000380075 CT45A7P0DMV0 189 aa17.61■□□□□ 0.41
TRIM54-202ENST00000380075 IGFBP2P18065 325 aa17.61■□□□□ 0.41
TRIM54-202ENST00000380075 HNF4GQ14541 408 aa17.61■□□□□ 0.41
TRIM54-202ENST00000380075 LINC00518Q8N0U6 118 aa17.61■□□□□ 0.41
TRIM54-202ENST00000380075 HCFC1P51610 2035 aa17.61■□□□□ 0.41
TRIM54-202ENST00000380075 FNDC10F2Z333 226 aa17.6■□□□□ 0.41
TRIM54-202ENST00000380075 TNFRSF13BO14836 293 aaPredicted RBP17.6■□□□□ 0.41
TRIM54-202ENST00000380075 NDUFB3O43676 98 aa17.6■□□□□ 0.41
TRIM54-202ENST00000380075 ATP5IP56385 69 aaPredicted RBP17.6■□□□□ 0.41
TRIM54-202ENST00000380075 CD81P60033 236 aa17.6■□□□□ 0.41
TRIM54-202ENST00000380075 LRRC10Q5BKY1 277 aa17.6■□□□□ 0.41
TRIM54-202ENST00000380075 TREML4Q6UXN2 200 aa17.6■□□□□ 0.41
TRIM54-202ENST00000380075 SLC24A4Q8NFF2 622 aa17.6■□□□□ 0.41
TRIM54-202ENST00000380075 OR13D1Q8NGV5 346 aa17.6■□□□□ 0.41
TRIM54-202ENST00000380075 DYNLRB1Q9NP97 96 aa17.6■□□□□ 0.41
TRIM54-202ENST00000380075 SMCO3A2RU48 225 aa17.6■□□□□ 0.41
TRIM54-202ENST00000380075 ZNF727A8MUV8 499 aa17.6■□□□□ 0.41
TRIM54-202ENST00000380075 NPY1RP25929 384 aa17.6■□□□□ 0.41
TRIM54-202ENST00000380075 COL8A1P27658 744 aa17.6■□□□□ 0.41
TRIM54-202ENST00000380075 EFNB3Q15768 340 aa17.6■□□□□ 0.41
TRIM54-202ENST00000380075 WDR25Q64LD2 544 aaPredicted RBP17.6■□□□□ 0.41
TRIM54-202ENST00000380075 FAM71F2Q6NXP2 309 aa17.6■□□□□ 0.41
TRIM54-202ENST00000380075 ZCCHC24Q8N2G6 241 aaKnown RBP17.6■□□□□ 0.41
TRIM54-202ENST00000380075 ABHD12Q8N2K0 398 aa17.6■□□□□ 0.41
TRIM54-202ENST00000380075 C8orf31Q8N9H6 132 aa17.6■□□□□ 0.41
TRIM54-202ENST00000380075 NPVFQ9HCQ7 196 aa17.6■□□□□ 0.41
TRIM54-202ENST00000380075 FKBP11Q9NYL4 201 aa17.6■□□□□ 0.41
TRIM54-202ENST00000380075 KAAG1Q9UBP8 84 aa17.6■□□□□ 0.41
TRIM54-202ENST00000380075 DOPEY2Q9Y3R5 2298 aa17.6■□□□□ 0.41
TRIM54-202ENST00000380075 ICE1Q9Y2F5 2266 aa17.59■□□□□ 0.41
TRIM54-202ENST00000380075 S100A6P06703 90 aa17.59■□□□□ 0.41
TRIM54-202ENST00000380075 DMRTC2Q8IXT2 367 aaPredicted RBP17.59■□□□□ 0.41
TRIM54-202ENST00000380075 CCL17Q92583 94 aa17.59■□□□□ 0.41
TRIM54-202ENST00000380075 NAT8Q9UHE5 227 aa17.59■□□□□ 0.41
TRIM54-202ENST00000380075 OR51B2Q9Y5P1 312 aa17.59■□□□□ 0.41
TRIM54-202ENST00000380075 E7EQL1 145 aa17.59■□□□□ 0.41
TRIM54-202ENST00000380075 UPK2O00526 184 aa17.59■□□□□ 0.41
TRIM54-202ENST00000380075 APOA2P02652 100 aa17.59■□□□□ 0.41
TRIM54-202ENST00000380075 CYP2G1PQ6ZSU1 146 aa17.59■□□□□ 0.41
TRIM54-202ENST00000380075 OSR1Q8TAX0 266 aaPredicted RBP17.59■□□□□ 0.41
TRIM54-202ENST00000380075 TMEM170AQ8WVE7 144 aa17.59■□□□□ 0.41
TRIM54-202ENST00000380075 CTDSP1Q9GZU7 261 aa17.59■□□□□ 0.41
TRIM54-202ENST00000380075 BET1LQ9NYM9 111 aa17.59■□□□□ 0.41
TRIM54-202ENST00000380075 KBTBD11O94819 623 aa17.58■□□□□ 0.4
TRIM54-202ENST00000380075 APOBEC3AP31941 199 aaPredicted RBP17.58■□□□□ 0.4
TRIM54-202ENST00000380075 ELOBQ15370 118 aa17.58■□□□□ 0.4
TRIM54-202ENST00000380075 TMEM200BQ69YZ2 307 aa17.58■□□□□ 0.4
TRIM54-202ENST00000380075 LSM4Q9Y4Z0 139 aaKnown RBP17.58■□□□□ 0.4
TRIM54-202ENST00000380075 PLCE1Q9P212 2302 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms