RNA–Protein interactions for RNA: ENST00000378746.8

KIF3A-202, Transcript of kinesin family member 3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene KIF3A, Length 6,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-202ENST00000378746 FLVCR1-AS1Q8TAF5 88 aa13.24□□□□□ -0.29
KIF3A-202ENST00000378746 SSBP3Q9BWW4 388 aaPredicted RBP13.24□□□□□ -0.29
KIF3A-202ENST00000378746 GOLT1AQ6ZVE7 132 aa13.24□□□□□ -0.29
KIF3A-202ENST00000378746 FOXJ2Q9P0K8 574 aa13.24□□□□□ -0.29
KIF3A-202ENST00000378746 HILPDAQ9Y5L2 63 aa13.24□□□□□ -0.29
KIF3A-202ENST00000378746 CGAP01215 116 aa13.24□□□□□ -0.29
KIF3A-202ENST00000378746 AMMECR1LQ6DCA0 310 aa13.24□□□□□ -0.29
KIF3A-202ENST00000378746 ZNF600Q6ZNG1 722 aa13.24□□□□□ -0.29
KIF3A-202ENST00000378746 NPIPB11E5RHQ5 1161 aa13.24□□□□□ -0.29
KIF3A-202ENST00000378746 TNFSF10P50591 281 aa13.24□□□□□ -0.29
KIF3A-202ENST00000378746 PAQR4Q8N4S7 273 aaPredicted RBP13.24□□□□□ -0.29
KIF3A-202ENST00000378746 LOC107984156A0A0G2JMH3 177 aa13.24□□□□□ -0.29
KIF3A-202ENST00000378746 TIAF1O95411 115 aa13.24□□□□□ -0.29
KIF3A-202ENST00000378746 PCP4P48539 62 aa13.24□□□□□ -0.29
KIF3A-202ENST00000378746 RPL39P5Q59GN2 51 aa13.24□□□□□ -0.29
KIF3A-202ENST00000378746 HEPN1Q6WQI6 88 aa13.24□□□□□ -0.29
KIF3A-202ENST00000378746 ARL17AQ8IVW1 177 aa13.24□□□□□ -0.29
KIF3A-202ENST00000378746 RNASEH2CQ8TDP1 164 aaKnown RBP13.24□□□□□ -0.29
KIF3A-202ENST00000378746 MBD3L1Q8WWY6 194 aa13.24□□□□□ -0.29
KIF3A-202ENST00000378746 CKAP5Q14008 2032 aa13.23□□□□□ -0.29
KIF3A-202ENST00000378746 ID3Q02535 119 aa13.23□□□□□ -0.29
KIF3A-202ENST00000378746 TIMP4Q99727 224 aa13.23□□□□□ -0.29
KIF3A-202ENST00000378746 IGLV3-12A0A075B6K2 115 aa13.23□□□□□ -0.29
KIF3A-202ENST00000378746 OTX1P32242 354 aaPredicted RBP13.23□□□□□ -0.29
KIF3A-202ENST00000378746 ATP5G3P48201 142 aa13.23□□□□□ -0.29
KIF3A-202ENST00000378746 LINC00469Q8N7U9 141 aa13.23□□□□□ -0.29
KIF3A-202ENST00000378746 ZNF414Q96IQ9 312 aa13.23□□□□□ -0.29
KIF3A-202ENST00000378746 UNQ5815/PRO19632Q6UWF5 114 aa13.23□□□□□ -0.29
KIF3A-202ENST00000378746 ATOH7Q8N100 152 aa13.23□□□□□ -0.29
KIF3A-202ENST00000378746 RPP21Q9H633 154 aaKnown RBP13.23□□□□□ -0.29
KIF3A-202ENST00000378746 CCDC88CQ9P219 2028 aa13.23□□□□□ -0.29
KIF3A-202ENST00000378746 PPIAL4CA0A0B4J2A2 164 aa13.23□□□□□ -0.29
KIF3A-202ENST00000378746 PPIAL4GP0DN37 164 aa13.23□□□□□ -0.29
KIF3A-202ENST00000378746 LGALS3P17931 250 aaKnown RBP13.23□□□□□ -0.29
KIF3A-202ENST00000378746 RELQ04864 619 aaPredicted RBP13.23□□□□□ -0.29
KIF3A-202ENST00000378746 REG4Q9BYZ8 158 aa13.23□□□□□ -0.29
KIF3A-202ENST00000378746 FAM90A9PA6NNJ1 464 aa13.23□□□□□ -0.29
KIF3A-202ENST00000378746 RBFOX2O43251 390 aaKnown RBP eCLIP13.23□□□□□ -0.29
KIF3A-202ENST00000378746 ZNF324O75467 553 aaPredicted RBP13.23□□□□□ -0.29
KIF3A-202ENST00000378746 IGFBP2P18065 325 aa13.23□□□□□ -0.29
KIF3A-202ENST00000378746 UCNP55089 124 aa13.22□□□□□ -0.29
KIF3A-202ENST00000378746 LEAP2Q969E1 77 aa13.22□□□□□ -0.29
KIF3A-202ENST00000378746 ELOVL5Q9NYP7 299 aa13.22□□□□□ -0.29
KIF3A-202ENST00000378746 PHLDA3Q9Y5J5 127 aa13.22□□□□□ -0.29
KIF3A-202ENST00000378746 SPAARA0A1B0GVQ0 90 aa13.22□□□□□ -0.29
KIF3A-202ENST00000378746 GLRXP35754 106 aa13.22□□□□□ -0.29
KIF3A-202ENST00000378746 TM4SF20Q53R12 229 aa13.22□□□□□ -0.29
KIF3A-202ENST00000378746 IQCF6A8MYZ5 107 aa13.22□□□□□ -0.29
KIF3A-202ENST00000378746 SLC17A3O00476 420 aa13.22□□□□□ -0.29
KIF3A-202ENST00000378746 NBEAP1P0C6P0 100 aa13.22□□□□□ -0.29
KIF3A-202ENST00000378746 PDCD11Q14690 1871 aaKnown RBP13.22□□□□□ -0.29
KIF3A-202ENST00000378746 IGKV1-9A0A0C4DH69 117 aa13.22□□□□□ -0.29
KIF3A-202ENST00000378746 LYZL4Q96KX0 146 aa13.22□□□□□ -0.29
KIF3A-202ENST00000378746 DYNLRB2Q8TF09 96 aa13.22□□□□□ -0.29
KIF3A-202ENST00000378746 NYNRINQ9P2P1 1898 aaKnown RBP13.21□□□□□ -0.29
KIF3A-202ENST00000378746 CCL21O00585 134 aa13.21□□□□□ -0.29
KIF3A-202ENST00000378746 CCL20P78556 96 aa13.21□□□□□ -0.29
KIF3A-202ENST00000378746 SRSF4Q08170 494 aaKnown RBP13.21□□□□□ -0.29
KIF3A-202ENST00000378746 ZNF324BQ6AW86 544 aaPredicted RBP13.21□□□□□ -0.29
KIF3A-202ENST00000378746 LHFPL1Q86WI0 220 aa13.21□□□□□ -0.29
KIF3A-202ENST00000378746 IGKV3-7A0A075B6H7 116 aa13.21□□□□□ -0.29
KIF3A-202ENST00000378746 COLCA2A8K830 154 aa13.21□□□□□ -0.29
KIF3A-202ENST00000378746 HIST1H2BKO60814 126 aa13.21□□□□□ -0.29
KIF3A-202ENST00000378746 HIST1H2BJP06899 126 aa13.21□□□□□ -0.29
KIF3A-202ENST00000378746 HIST1H2BOP23527 126 aa13.21□□□□□ -0.29
KIF3A-202ENST00000378746 HIST1H2BBP33778 126 aa13.21□□□□□ -0.29
KIF3A-202ENST00000378746 HIST1H2BDP58876 126 aa13.21□□□□□ -0.29
KIF3A-202ENST00000378746 HIST1H2BCP62807 126 aa13.21□□□□□ -0.29
KIF3A-202ENST00000378746 HIST2H2BEQ16778 126 aa13.21□□□□□ -0.29
KIF3A-202ENST00000378746 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.21□□□□□ -0.29
KIF3A-202ENST00000378746 HIST1H2BHQ93079 126 aa13.21□□□□□ -0.29
KIF3A-202ENST00000378746 HIST1H2BNQ99877 126 aa13.21□□□□□ -0.29
KIF3A-202ENST00000378746 HIST1H2BMQ99879 126 aa13.21□□□□□ -0.29
KIF3A-202ENST00000378746 CYTL1Q9NRR1 136 aa13.21□□□□□ -0.29
KIF3A-202ENST00000378746 GLRX5Q86SX6 157 aa13.21□□□□□ -0.3
KIF3A-202ENST00000378746 LDLRAD4O15165 306 aa13.21□□□□□ -0.3
KIF3A-202ENST00000378746 RFPL3SP0C7P2 107 aa13.21□□□□□ -0.3
KIF3A-202ENST00000378746 TIMM23BQ5SRD1 257 aa13.21□□□□□ -0.3
KIF3A-202ENST00000378746 TRAV1-1A0A0B4J248 108 aa13.2□□□□□ -0.3
KIF3A-202ENST00000378746 C7orf71A4D174 169 aa13.2□□□□□ -0.3
KIF3A-202ENST00000378746 SFTPCP11686 197 aa13.2□□□□□ -0.3
KIF3A-202ENST00000378746 MEF2CQ06413 473 aaPredicted RBP13.2□□□□□ -0.3
KIF3A-202ENST00000378746 WFDC3Q8IUB2 231 aa13.2□□□□□ -0.3
KIF3A-202ENST00000378746 OR13A1Q8NGR1 328 aa13.2□□□□□ -0.3
KIF3A-202ENST00000378746 TMEM171Q8WVE6 324 aa13.2□□□□□ -0.3
KIF3A-202ENST00000378746 WFDC1Q9HC57 220 aa13.2□□□□□ -0.3
KIF3A-202ENST00000378746 ARID1AO14497 2285 aa13.2□□□□□ -0.3
KIF3A-202ENST00000378746 A0A0A6YYD4 124 aa13.2□□□□□ -0.3
KIF3A-202ENST00000378746 KBTBD11-OT1A0A1B0GTJ5 212 aa13.2□□□□□ -0.3
KIF3A-202ENST00000378746 PROB1E7EW31 1015 aa13.2□□□□□ -0.3
KIF3A-202ENST00000378746 NEUROG1Q92886 237 aa13.2□□□□□ -0.3
KIF3A-202ENST00000378746 PRELID3AQ96N28 172 aa13.2□□□□□ -0.3
KIF3A-202ENST00000378746 PRDM13Q9H4Q3 707 aa13.2□□□□□ -0.3
KIF3A-202ENST00000378746 TRBV24-1A0A075B6N3 115 aa13.2□□□□□ -0.3
KIF3A-202ENST00000378746 A0A1B0GUT8 65 aa13.2□□□□□ -0.3
KIF3A-202ENST00000378746 HIST1H1AQ02539 215 aaPredicted RBP13.2□□□□□ -0.3
KIF3A-202ENST00000378746 PAPPA-AS1Q5QFB9 102 aa13.2□□□□□ -0.3
KIF3A-202ENST00000378746 TMEM190Q8WZ59 177 aa13.2□□□□□ -0.3
KIF3A-202ENST00000378746 OSTCQ9NRP0 149 aa13.2□□□□□ -0.3
KIF3A-202ENST00000378746 FOXD3Q9UJU5 478 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms