RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 ANAPC10Q9UM13 185 aa14.38□□□□□ -0.11
TMEM53-201ENST00000372235 DNAH9Q9NYC9 4486 aa14.38□□□□□ -0.11
TMEM53-201ENST00000372235 RBMXL2O75526 392 aaKnown RBP14.37□□□□□ -0.11
TMEM53-201ENST00000372235 APOA1P02647 267 aa14.37□□□□□ -0.11
TMEM53-201ENST00000372235 PTHLHP12272 177 aa14.37□□□□□ -0.11
TMEM53-201ENST00000372235 GNRHRP30968 328 aa14.37□□□□□ -0.11
TMEM53-201ENST00000372235 LSM3P62310 102 aaKnown RBP14.37□□□□□ -0.11
TMEM53-201ENST00000372235 HAPLN4Q86UW8 402 aa14.37□□□□□ -0.11
TMEM53-201ENST00000372235 OR51H1Q8NH63 302 aa14.37□□□□□ -0.11
TMEM53-201ENST00000372235 TUBA4BQ9H853 241 aa14.37□□□□□ -0.11
TMEM53-201ENST00000372235 SCPEP1Q9HB40 452 aa14.37□□□□□ -0.11
TMEM53-201ENST00000372235 SLC2A8Q9NY64 477 aa14.37□□□□□ -0.11
TMEM53-201ENST00000372235 TNCP24821 2201 aa14.36□□□□□ -0.11
TMEM53-201ENST00000372235 MEIS3P1A6NDR6 274 aa14.36□□□□□ -0.11
TMEM53-201ENST00000372235 UPK2O00526 184 aa14.36□□□□□ -0.11
TMEM53-201ENST00000372235 F2RP25116 425 aa14.36□□□□□ -0.11
TMEM53-201ENST00000372235 ARL3P36405 182 aa14.36□□□□□ -0.11
TMEM53-201ENST00000372235 MECP2P51608 486 aaKnown RBP14.36□□□□□ -0.11
TMEM53-201ENST00000372235 TM2D3Q9BRN9 247 aa14.36□□□□□ -0.11
TMEM53-201ENST00000372235 FAM212BQ9NTI7 297 aaPredicted RBP14.36□□□□□ -0.11
TMEM53-201ENST00000372235 GPR31O00270 319 aa14.35□□□□□ -0.11
TMEM53-201ENST00000372235 AREGP15514 252 aa14.35□□□□□ -0.11
TMEM53-201ENST00000372235 RFX2P48378 723 aa14.35□□□□□ -0.11
TMEM53-201ENST00000372235 OR2B8PP59922 312 aa14.35□□□□□ -0.11
TMEM53-201ENST00000372235 MUC7Q8TAX7 377 aa14.35□□□□□ -0.11
TMEM53-201ENST00000372235 AP3S1Q92572 193 aa14.35□□□□□ -0.11
TMEM53-201ENST00000372235 FANCD2OSQ96PS1 177 aa14.35□□□□□ -0.11
TMEM53-201ENST00000372235 GPHA2Q96T91 129 aa14.35□□□□□ -0.11
TMEM53-201ENST00000372235 SPATA25Q9BR10 227 aa14.35□□□□□ -0.11
TMEM53-201ENST00000372235 QTRT1Q9BXR0 403 aaKnown RBP14.35□□□□□ -0.11
TMEM53-201ENST00000372235 PALMDQ9NP74 551 aa14.35□□□□□ -0.11
TMEM53-201ENST00000372235 TMEM140Q9NV12 185 aa14.35□□□□□ -0.11
TMEM53-201ENST00000372235 FKBP11Q9NYL4 201 aa14.35□□□□□ -0.11
TMEM53-201ENST00000372235 IGLV11-55A0A075B6I3 123 aa14.34□□□□□ -0.11
TMEM53-201ENST00000372235 MARCH11A6NNE9 402 aa14.34□□□□□ -0.11
TMEM53-201ENST00000372235 E7EUB6 86 aa14.34□□□□□ -0.11
TMEM53-201ENST00000372235 PGLYRP1O75594 196 aaPredicted RBP14.34□□□□□ -0.11
TMEM53-201ENST00000372235 SNAPC5O75971 98 aa14.34□□□□□ -0.11
TMEM53-201ENST00000372235 PMP2P02689 132 aa14.34□□□□□ -0.11
TMEM53-201ENST00000372235 FCER2P06734 321 aa14.34□□□□□ -0.11
TMEM53-201ENST00000372235 TGFBR1P36897 503 aa14.34□□□□□ -0.11
TMEM53-201ENST00000372235 RORCP51449 518 aa14.34□□□□□ -0.11
TMEM53-201ENST00000372235 TSPAN5P62079 268 aa14.34□□□□□ -0.11
TMEM53-201ENST00000372235 MZT2AQ6P582 158 aa14.34□□□□□ -0.11
TMEM53-201ENST00000372235 OR1L6Q8NGR2 347 aa14.34□□□□□ -0.11
TMEM53-201ENST00000372235 DGCR14Q96DF8 476 aaKnown RBP14.34□□□□□ -0.11
TMEM53-201ENST00000372235 TSC22D3Q99576 134 aa14.34□□□□□ -0.11
TMEM53-201ENST00000372235 FUNDC2Q9BWH2 189 aa14.34□□□□□ -0.11
TMEM53-201ENST00000372235 COMMD3Q9UBI1 195 aa14.34□□□□□ -0.11
TMEM53-201ENST00000372235 PPP5D1E7EU14 171 aa14.33□□□□□ -0.12
TMEM53-201ENST00000372235 TPPPO94811 219 aa14.33□□□□□ -0.12
TMEM53-201ENST00000372235 NDUFB8O95169 186 aa14.33□□□□□ -0.12
TMEM53-201ENST00000372235 IFNA6P05013 189 aa14.33□□□□□ -0.12
TMEM53-201ENST00000372235 TRAPPC2P0DI81 140 aa14.33□□□□□ -0.12
TMEM53-201ENST00000372235 TRAPPC2BP0DI82 140 aa14.33□□□□□ -0.12
TMEM53-201ENST00000372235 CLEC19AQ6UXS0 136 aa14.33□□□□□ -0.12
TMEM53-201ENST00000372235 OR1L8Q8NGR8 309 aa14.33□□□□□ -0.12
TMEM53-201ENST00000372235 C15orf40Q8WUR7 153 aa14.33□□□□□ -0.12
TMEM53-201ENST00000372235 MARC2Q969Z3 335 aa14.33□□□□□ -0.12
TMEM53-201ENST00000372235 CITED4Q96RK1 184 aa14.33□□□□□ -0.12
TMEM53-201ENST00000372235 ATP6V0BQ99437 205 aa14.33□□□□□ -0.12
TMEM53-201ENST00000372235 THAP7Q9BT49 309 aaPredicted RBP14.33□□□□□ -0.12
TMEM53-201ENST00000372235 C2orf70A6NJV1 201 aa14.32□□□□□ -0.12
TMEM53-201ENST00000372235 S1PR2O95136 353 aa14.32□□□□□ -0.12
TMEM53-201ENST00000372235 OR2C1O95371 312 aa14.32□□□□□ -0.12
TMEM53-201ENST00000372235 RLN1P04808 185 aa14.32□□□□□ -0.12
TMEM53-201ENST00000372235 FOLR2P14207 255 aa14.32□□□□□ -0.12
TMEM53-201ENST00000372235 PTBP1P26599 531 aaKnown RBP eCLIP14.32□□□□□ -0.12
TMEM53-201ENST00000372235 RCVRNP35243 200 aa14.32□□□□□ -0.12
TMEM53-201ENST00000372235 HRH1P35367 487 aa14.32□□□□□ -0.12
TMEM53-201ENST00000372235 DEFB114Q30KQ6 69 aa14.32□□□□□ -0.12
TMEM53-201ENST00000372235 CD300EQ496F6 205 aaPredicted RBP14.32□□□□□ -0.12
TMEM53-201ENST00000372235 VN1R17PQ8TDU5 208 aa14.32□□□□□ -0.12
TMEM53-201ENST00000372235 GPX8Q8TED1 209 aa14.32□□□□□ -0.12
TMEM53-201ENST00000372235 TMEM56Q96MV1 263 aa14.32□□□□□ -0.12
TMEM53-201ENST00000372235 PRNDQ9UKY0 176 aa14.32□□□□□ -0.12
TMEM53-201ENST00000372235 DMRT1Q9Y5R6 373 aa14.32□□□□□ -0.12
TMEM53-201ENST00000372235 A0A1B0GW64 132 aa14.31□□□□□ -0.12
TMEM53-201ENST00000372235 A8MWP6 167 aa14.31□□□□□ -0.12
TMEM53-201ENST00000372235 CLEC3BP05452 202 aa14.31□□□□□ -0.12
TMEM53-201ENST00000372235 CD81P60033 236 aa14.31□□□□□ -0.12
TMEM53-201ENST00000372235 ANKRD55Q3KP44 614 aa14.31□□□□□ -0.12
TMEM53-201ENST00000372235 GDPD1Q8N9F7 314 aa14.31□□□□□ -0.12
TMEM53-201ENST00000372235 OR5B3Q8NH48 314 aa14.31□□□□□ -0.12
TMEM53-201ENST00000372235 LSM10Q969L4 123 aaKnown RBP14.31□□□□□ -0.12
TMEM53-201ENST00000372235 CCDC140Q96MF4 163 aa14.31□□□□□ -0.12
TMEM53-201ENST00000372235 ZC4H2Q9NQZ6 224 aa14.31□□□□□ -0.12
TMEM53-201ENST00000372235 IGLC7A0M8Q6 106 aa14.3□□□□□ -0.12
TMEM53-201ENST00000372235 ZNF320A2RRD8 509 aa14.3□□□□□ -0.12
TMEM53-201ENST00000372235 REG1AP05451 166 aa14.3□□□□□ -0.12
TMEM53-201ENST00000372235 EIF4EP06730 217 aaKnown RBP14.3□□□□□ -0.12
TMEM53-201ENST00000372235 SERPINE2P07093 398 aa14.3□□□□□ -0.12
TMEM53-201ENST00000372235 CBLN1P23435 193 aa14.3□□□□□ -0.12
TMEM53-201ENST00000372235 HLA-DMAP28067 261 aa14.3□□□□□ -0.12
TMEM53-201ENST00000372235 LPAR6P43657 344 aa14.3□□□□□ -0.12
TMEM53-201ENST00000372235 ELLP55199 621 aaPredicted RBP14.3□□□□□ -0.12
TMEM53-201ENST00000372235 UCP3P55916 312 aa14.3□□□□□ -0.12
TMEM53-201ENST00000372235 VBP1P61758 197 aa14.3□□□□□ -0.12
TMEM53-201ENST00000372235 SLC16A13Q7RTY0 426 aa14.3□□□□□ -0.12
TMEM53-201ENST00000372235 LYSMD2Q8IV50 215 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms