RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 C11orf94C9JXX5 98 aa23.71■■□□□ 1.39
SSBP3-204ENST00000371320 RPL23P62829 140 aaKnown RBP23.71■■□□□ 1.39
SSBP3-204ENST00000371320 RTL8BQ17RB0 113 aa23.71■■□□□ 1.39
SSBP3-204ENST00000371320 TMEM249Q2WGJ8 235 aa23.71■■□□□ 1.39
SSBP3-204ENST00000371320 SLC35D1Q9NTN3 355 aa23.71■■□□□ 1.39
SSBP3-204ENST00000371320 ZNRD1Q9P1U0 126 aa23.71■■□□□ 1.39
SSBP3-204ENST00000371320 ACACAQ13085 2346 aa23.7■■□□□ 1.38
SSBP3-204ENST00000371320 RPL31P62899 125 aaKnown RBP23.7■■□□□ 1.38
SSBP3-204ENST00000371320 MEF2CQ06413 473 aaPredicted RBP23.7■■□□□ 1.38
SSBP3-204ENST00000371320 TBR1Q16650 682 aa23.7■■□□□ 1.38
SSBP3-204ENST00000371320 MIC13Q5XKP0 118 aa23.7■■□□□ 1.38
SSBP3-204ENST00000371320 SSX8Q7RTT4 187 aa23.7■■□□□ 1.38
SSBP3-204ENST00000371320 OR13D1Q8NGV5 346 aa23.7■■□□□ 1.38
SSBP3-204ENST00000371320 HINT2Q9BX68 163 aa23.7■■□□□ 1.38
SSBP3-204ENST00000371320 PRNDQ9UKY0 176 aa23.7■■□□□ 1.38
SSBP3-204ENST00000371320 ZGRF1Q86YA3 2104 aa23.69■■□□□ 1.38
SSBP3-204ENST00000371320 FOXC1Q12948 553 aa23.69■■□□□ 1.38
SSBP3-204ENST00000371320 CA2P00918 260 aa23.69■■□□□ 1.38
SSBP3-204ENST00000371320 TRGC2P03986 189 aa23.69■■□□□ 1.38
SSBP3-204ENST00000371320 MYOD1P15172 320 aa23.69■■□□□ 1.38
SSBP3-204ENST00000371320 NCMAPQ5T1S8 102 aa23.69■■□□□ 1.38
SSBP3-204ENST00000371320 LSM4Q9Y4Z0 139 aaKnown RBP23.69■■□□□ 1.38
SSBP3-204ENST00000371320 IGKV1-16P04430 117 aa23.68■■□□□ 1.38
SSBP3-204ENST00000371320 ARSJQ5FYB0 599 aaPredicted RBP23.68■■□□□ 1.38
SSBP3-204ENST00000371320 C16orf82Q7Z2V1 217 aa23.68■■□□□ 1.38
SSBP3-204ENST00000371320 OR10A7Q8NGE5 316 aa23.68■■□□□ 1.38
SSBP3-204ENST00000371320 KCNIP2Q9NS61 270 aa23.68■■□□□ 1.38
SSBP3-204ENST00000371320 PPIAL4EA0A075B759 164 aa23.68■■□□□ 1.38
SSBP3-204ENST00000371320 VSTM5A8MXK1 200 aa23.68■■□□□ 1.38
SSBP3-204ENST00000371320 PPIAL4DF5H284 164 aa23.68■■□□□ 1.38
SSBP3-204ENST00000371320 PPIAL4FP0DN26 164 aa23.68■■□□□ 1.38
SSBP3-204ENST00000371320 NDUFA6P56556 154 aa23.68■■□□□ 1.38
SSBP3-204ENST00000371320 PPIAL4AQ9Y536 164 aa23.68■■□□□ 1.38
SSBP3-204ENST00000371320 APC2O95996 2303 aa23.67■■□□□ 1.38
SSBP3-204ENST00000371320 ATMQ13315 3056 aa23.67■■□□□ 1.38
SSBP3-204ENST00000371320 TRBV24-1A0A075B6N3 115 aa23.67■■□□□ 1.38
SSBP3-204ENST00000371320 TMEM178BH3BS89 294 aa23.67■■□□□ 1.38
SSBP3-204ENST00000371320 PRR30Q53SZ7 412 aaPredicted RBP23.67■■□□□ 1.38
SSBP3-204ENST00000371320 SLC16A13Q7RTY0 426 aa23.67■■□□□ 1.38
SSBP3-204ENST00000371320 C1orf159Q96HA4 380 aa23.67■■□□□ 1.38
SSBP3-204ENST00000371320 DOK5Q9P104 306 aa23.67■■□□□ 1.38
SSBP3-204ENST00000371320 J3QR06 171 aa23.66■■□□□ 1.38
SSBP3-204ENST00000371320 UPK2O00526 184 aa23.66■■□□□ 1.38
SSBP3-204ENST00000371320 IL6RP08887 468 aaPredicted RBP23.66■■□□□ 1.38
SSBP3-204ENST00000371320 HOXA5P20719 270 aa23.66■■□□□ 1.38
SSBP3-204ENST00000371320 UBE2G2P60604 165 aa23.66■■□□□ 1.38
SSBP3-204ENST00000371320 TEPPQ6URK8 271 aa23.66■■□□□ 1.38
SSBP3-204ENST00000371320 SSMEM1Q8WWF3 244 aa23.66■■□□□ 1.38
SSBP3-204ENST00000371320 CCL17Q92583 94 aa23.66■■□□□ 1.38
SSBP3-204ENST00000371320 BSNQ9UPA5 3926 aa23.66■■□□□ 1.38
SSBP3-204ENST00000371320 CLN5O75503 358 aa23.66■■□□□ 1.38
SSBP3-204ENST00000371320 CST9LP1Q5W188 147 aa23.66■■□□□ 1.38
SSBP3-204ENST00000371320 NANPQ8TBE9 248 aa23.66■■□□□ 1.38
SSBP3-204ENST00000371320 ZNF714Q96N38 554 aa23.66■■□□□ 1.38
SSBP3-204ENST00000371320 ZNF257Q9Y2Q1 563 aa23.66■■□□□ 1.38
SSBP3-204ENST00000371320 SRRM4A7MD48 611 aaKnown RBP23.65■■□□□ 1.38
SSBP3-204ENST00000371320 TGOLN2O43493 480 aa23.65■■□□□ 1.38
SSBP3-204ENST00000371320 PDE6DO43924 150 aa23.65■■□□□ 1.38
SSBP3-204ENST00000371320 HIST1H2BKO60814 126 aa23.65■■□□□ 1.38
SSBP3-204ENST00000371320 HIST1H2BJP06899 126 aa23.65■■□□□ 1.38
SSBP3-204ENST00000371320 CCL3L1P16619 93 aa23.65■■□□□ 1.38
SSBP3-204ENST00000371320 HIST1H2BOP23527 126 aa23.65■■□□□ 1.38
SSBP3-204ENST00000371320 HIST1H2BBP33778 126 aa23.65■■□□□ 1.38
SSBP3-204ENST00000371320 HIST1H2BDP58876 126 aa23.65■■□□□ 1.38
SSBP3-204ENST00000371320 HIST1H2BCP62807 126 aa23.65■■□□□ 1.38
SSBP3-204ENST00000371320 HIST2H2BEQ16778 126 aa23.65■■□□□ 1.38
SSBP3-204ENST00000371320 HIST2H2BFQ5QNW6 126 aaPredicted RBP23.65■■□□□ 1.38
SSBP3-204ENST00000371320 RND1Q92730 232 aa23.65■■□□□ 1.38
SSBP3-204ENST00000371320 HIST1H2BHQ93079 126 aa23.65■■□□□ 1.38
SSBP3-204ENST00000371320 WFIKKN1Q96NZ8 548 aa23.65■■□□□ 1.38
SSBP3-204ENST00000371320 HIST1H2BNQ99877 126 aa23.65■■□□□ 1.38
SSBP3-204ENST00000371320 HIST1H2BMQ99879 126 aa23.65■■□□□ 1.38
SSBP3-204ENST00000371320 PLEKHA3Q9HB20 300 aa23.65■■□□□ 1.38
SSBP3-204ENST00000371320 YLPM1P49750 1951 aaKnown RBP23.65■■□□□ 1.38
SSBP3-204ENST00000371320 NPPCP23582 126 aa23.64■■□□□ 1.38
SSBP3-204ENST00000371320 B2MP61769 119 aa23.64■■□□□ 1.38
SSBP3-204ENST00000371320 ZNF833PQ6ZTB9 187 aa23.64■■□□□ 1.38
SSBP3-204ENST00000371320 ARL14EPLP0DKL9 152 aa23.64■■□□□ 1.37
SSBP3-204ENST00000371320 PRCDQ00LT1 54 aa23.64■■□□□ 1.37
SSBP3-204ENST00000371320 RAB31Q13636 194 aa23.64■■□□□ 1.37
SSBP3-204ENST00000371320 TMEM200BQ69YZ2 307 aa23.64■■□□□ 1.37
SSBP3-204ENST00000371320 PIEZO2Q9H5I5 2752 aa23.63■■□□□ 1.37
SSBP3-204ENST00000371320 H7BYZ3 331 aa23.63■■□□□ 1.37
SSBP3-204ENST00000371320 STAG3L2P0CL84 134 aa23.63■■□□□ 1.37
SSBP3-204ENST00000371320 STAG3L3P0CL85 134 aa23.63■■□□□ 1.37
SSBP3-204ENST00000371320 ATP5G3P48201 142 aa23.63■■□□□ 1.37
SSBP3-204ENST00000371320 TMEM106BQ9NUM4 274 aa23.63■■□□□ 1.37
SSBP3-204ENST00000371320 SPTBN2O15020 2390 aa23.63■■□□□ 1.37
SSBP3-204ENST00000371320 FCN3O75636 299 aa23.63■■□□□ 1.37
SSBP3-204ENST00000371320 VENTXO95231 258 aa23.63■■□□□ 1.37
SSBP3-204ENST00000371320 CXorf1O96002 111 aa23.63■■□□□ 1.37
SSBP3-204ENST00000371320 SPNS3Q6ZMD2 512 aa23.63■■□□□ 1.37
SSBP3-204ENST00000371320 OR51G1Q8NGK1 321 aa23.63■■□□□ 1.37
SSBP3-204ENST00000371320 ABHD5Q8WTS1 349 aa23.63■■□□□ 1.37
SSBP3-204ENST00000371320 H1FXQ92522 213 aaKnown RBP23.63■■□□□ 1.37
SSBP3-204ENST00000371320 NGBQ9NPG2 151 aa23.63■■□□□ 1.37
SSBP3-204ENST00000371320 PTPRZ1P23471 2315 aaPredicted RBP23.62■■□□□ 1.37
SSBP3-204ENST00000371320 MRPL20Q9BYC9 149 aaKnown RBP23.62■■□□□ 1.37
SSBP3-204ENST00000371320 K7ENP7 123 aa23.61■■□□□ 1.37
SSBP3-204ENST00000371320 PFN1P07737 140 aaKnown RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms