RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 GCHFRP30047 84 aa9.65□□□□□ -0.87
SMARCA1-201ENST00000371121 RHOBP62745 196 aa9.65□□□□□ -0.87
SMARCA1-201ENST00000371121 OR52L2PQ8NGH6 319 aa9.65□□□□□ -0.87
SMARCA1-201ENST00000371121 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.65□□□□□ -0.87
SMARCA1-201ENST00000371121 TMPRSS3P57727 454 aa9.64□□□□□ -0.87
SMARCA1-201ENST00000371121 SELENOVP59797 346 aa9.64□□□□□ -0.87
SMARCA1-201ENST00000371121 CENPWQ5EE01 88 aa9.64□□□□□ -0.87
SMARCA1-201ENST00000371121 C9orf135Q5VTT2 229 aa9.64□□□□□ -0.87
SMARCA1-201ENST00000371121 YRDCQ86U90 279 aaKnown RBP9.64□□□□□ -0.87
SMARCA1-201ENST00000371121 SLC35D1Q9NTN3 355 aa9.64□□□□□ -0.87
SMARCA1-201ENST00000371121 LY96Q9Y6Y9 160 aa9.64□□□□□ -0.87
SMARCA1-201ENST00000371121 DUSP3P51452 185 aaPredicted RBP9.64□□□□□ -0.87
SMARCA1-201ENST00000371121 LRRC10Q5BKY1 277 aa9.64□□□□□ -0.87
SMARCA1-201ENST00000371121 C1orf229Q6ZS94 237 aaPredicted RBP9.64□□□□□ -0.87
SMARCA1-201ENST00000371121 AAED1Q7RTV5 226 aa9.64□□□□□ -0.87
SMARCA1-201ENST00000371121 MKXQ8IYA7 352 aa9.64□□□□□ -0.87
SMARCA1-201ENST00000371121 OR4C5Q8NGB2 326 aa9.64□□□□□ -0.87
SMARCA1-201ENST00000371121 TRAV9-2A0A087WT02 112 aa9.64□□□□□ -0.87
SMARCA1-201ENST00000371121 TRAV3A0A0B4J244 114 aa9.64□□□□□ -0.87
SMARCA1-201ENST00000371121 SH2D7A6NKC9 451 aaPredicted RBP9.64□□□□□ -0.87
SMARCA1-201ENST00000371121 CDIPTO14735 213 aa9.64□□□□□ -0.87
SMARCA1-201ENST00000371121 CXCL13O43927 109 aa9.64□□□□□ -0.87
SMARCA1-201ENST00000371121 CXorf1O96002 111 aa9.64□□□□□ -0.87
SMARCA1-201ENST00000371121 SP1P08047 785 aa9.64□□□□□ -0.87
SMARCA1-201ENST00000371121 VDAC2P45880 294 aaPredicted RBP9.64□□□□□ -0.87
SMARCA1-201ENST00000371121 UTF1Q5T230 341 aa9.64□□□□□ -0.87
SMARCA1-201ENST00000371121 OR2D3Q8NGH3 330 aa9.64□□□□□ -0.87
SMARCA1-201ENST00000371121 LRP5LA4QPB2 252 aa9.63□□□□□ -0.87
SMARCA1-201ENST00000371121 BVES-AS1Q5T3Y7 98 aa9.63□□□□□ -0.87
SMARCA1-201ENST00000371121 BET1LQ9NYM9 111 aa9.63□□□□□ -0.87
SMARCA1-201ENST00000371121 GGTLC3B5MD39 225 aa9.63□□□□□ -0.87
SMARCA1-201ENST00000371121 DUX1O43812 170 aa9.63□□□□□ -0.87
SMARCA1-201ENST00000371121 SAP30O75446 220 aa9.63□□□□□ -0.87
SMARCA1-201ENST00000371121 NXPH1P58417 271 aa9.63□□□□□ -0.87
SMARCA1-201ENST00000371121 MRPL54Q6P161 138 aaKnown RBP9.63□□□□□ -0.87
SMARCA1-201ENST00000371121 PQLC2Q6ZP29 291 aa9.63□□□□□ -0.87
SMARCA1-201ENST00000371121 SSMEM1Q8WWF3 244 aa9.63□□□□□ -0.87
SMARCA1-201ENST00000371121 IMMP1LQ96LU5 166 aa9.63□□□□□ -0.87
SMARCA1-201ENST00000371121 DEFB126Q9BYW3 111 aa9.63□□□□□ -0.87
SMARCA1-201ENST00000371121 IGHV1-45A0A0A0MS14 117 aa9.63□□□□□ -0.87
SMARCA1-201ENST00000371121 TRAV8-6A0A0B4J262 113 aa9.63□□□□□ -0.87
SMARCA1-201ENST00000371121 C12orf77C9JDV5 145 aa9.63□□□□□ -0.87
SMARCA1-201ENST00000371121 TMEM238C9JI98 176 aa9.63□□□□□ -0.87
SMARCA1-201ENST00000371121 C17orf112F2Z3M2 114 aa9.63□□□□□ -0.87
SMARCA1-201ENST00000371121 SCRG1O75711 98 aa9.63□□□□□ -0.87
SMARCA1-201ENST00000371121 S100GP29377 79 aa9.63□□□□□ -0.87
SMARCA1-201ENST00000371121 PNKDQ8N490 385 aa9.63□□□□□ -0.87
SMARCA1-201ENST00000371121 OR10D3Q8NH80 312 aa9.63□□□□□ -0.87
SMARCA1-201ENST00000371121 SDK1Q7Z5N4 2213 aa9.63□□□□□ -0.87
SMARCA1-201ENST00000371121 IGHV3-64DA0A0J9YX35 117 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 RAB29O14966 203 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 GFRA3O60609 400 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 GLB1P16278 677 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 PMCHL1Q16048 86 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 OR5B3Q8NH48 314 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 IFI44Q8TCB0 444 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 MBD6Q96DN6 1003 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 TNFRSF19Q9NS68 423 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 MUC21A0A0G2JKD1 596 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 MUC21A0A140T8X8 626 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 PINLYPA6NC86 204 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 CRXO43186 299 aaPredicted RBP9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 LINC00869P0C866 280 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 Q56UQ5 140 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 MUC21Q5SSG8 566 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 LHFPL4Q7Z7J7 247 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 VKORC1L1Q8N0U8 176 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 DEFB125Q8N687 156 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 CLEC5AQ9NY25 188 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 LY6G6EA0A0G2JKS1 128 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 CBY3A6NI87 242 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 C21orf140B9A014 251 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 COX6A1P12074 109 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 AREGP15514 252 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 NTF3P20783 257 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 CRYBB3P26998 211 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 AMMECR1LQ6DCA0 310 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 CLEC2AQ6UVW9 174 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 MIR17HGQ75NE6 70 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 TCTEX1D1Q8N7M0 179 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 OR52E5Q8NH55 327 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 TRAPPC2LQ9UL33 140 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 U3KQA8 63 aa9.62□□□□□ -0.87
SMARCA1-201ENST00000371121 SVEP1Q4LDE5 3571 aa9.61□□□□□ -0.87
SMARCA1-201ENST00000371121 IGKV1OR2-108A0A075B7D4 117 aa9.61□□□□□ -0.87
SMARCA1-201ENST00000371121 LOC102723996A0A087X1L8 192 aa9.61□□□□□ -0.87
SMARCA1-201ENST00000371121 A0A1W2PPV4 95 aa9.61□□□□□ -0.87
SMARCA1-201ENST00000371121 A0A1W2PQM1 296 aa9.61□□□□□ -0.87
SMARCA1-201ENST00000371121 FAM166BA8MTA8 275 aa9.61□□□□□ -0.87
SMARCA1-201ENST00000371121 CD24P25063 80 aa9.61□□□□□ -0.87
SMARCA1-201ENST00000371121 CD27P26842 260 aa9.61□□□□□ -0.87
SMARCA1-201ENST00000371121 CA7P43166 264 aa9.61□□□□□ -0.87
SMARCA1-201ENST00000371121 ARF1P84077 181 aaKnown RBP9.61□□□□□ -0.87
SMARCA1-201ENST00000371121 STUMQ69YW2 141 aa9.61□□□□□ -0.87
SMARCA1-201ENST00000371121 C19orf35Q6ZS72 473 aa9.61□□□□□ -0.87
SMARCA1-201ENST00000371121 ABHD12Q8N2K0 398 aa9.61□□□□□ -0.87
SMARCA1-201ENST00000371121 LINC00479Q96M42 142 aa9.61□□□□□ -0.87
SMARCA1-201ENST00000371121 TXNDC17Q9BRA2 123 aa9.61□□□□□ -0.87
SMARCA1-201ENST00000371121 ZFHX3Q15911 3703 aa9.61□□□□□ -0.87
SMARCA1-201ENST00000371121 TNRC18O15417 2968 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms