RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 ZNF343Q6P1L6 599 aa2.78□□□□□ -1.96
ECHDC1-205ENST00000368295 ZNF788Q6ZQV5 615 aa2.78□□□□□ -1.96
ECHDC1-205ENST00000368295 RNF165Q6ZSG1 346 aa2.78□□□□□ -1.96
ECHDC1-205ENST00000368295 PPP1R27Q86WC6 154 aa2.78□□□□□ -1.96
ECHDC1-205ENST00000368295 LYG1Q8N1E2 194 aa2.78□□□□□ -1.96
ECHDC1-205ENST00000368295 DCAKDQ8WVC6 231 aa2.78□□□□□ -1.96
ECHDC1-205ENST00000368295 TMEM54Q969K7 222 aa2.78□□□□□ -1.96
ECHDC1-205ENST00000368295 GPR146Q96CH1 333 aa2.78□□□□□ -1.96
ECHDC1-205ENST00000368295 RITA1Q96K30 269 aa2.78□□□□□ -1.96
ECHDC1-205ENST00000368295 TP53RKQ96S44 253 aa2.78□□□□□ -1.96
ECHDC1-205ENST00000368295 MCHR1Q99705 422 aa2.78□□□□□ -1.96
ECHDC1-205ENST00000368295 TM2D1Q9BX74 207 aa2.78□□□□□ -1.96
ECHDC1-205ENST00000368295 OR51E2Q9H255 320 aa2.78□□□□□ -1.96
ECHDC1-205ENST00000368295 HES4Q9HCC6 221 aa2.78□□□□□ -1.96
ECHDC1-205ENST00000368295 LAMTOR2Q9Y2Q5 125 aa2.78□□□□□ -1.96
ECHDC1-205ENST00000368295 RFNGQ9Y644 331 aa2.78□□□□□ -1.96
ECHDC1-205ENST00000368295 IGHV1OR21-1A0A087WYE8 117 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 TRBV5-3A0A0A0MS03 114 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 TRAV8-2A0A0B4J237 113 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 LOC100131303A0A0U1RQF7 123 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 TMEM218A2RU14 115 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 ZNF724A8MTY0 619 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 A8MWP6 167 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 M0R2Z0 102 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 SLC37A4O43826 429 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 STATHP02808 62 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 SERPINE1P05121 402 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 LGALS1P09382 135 aaKnown RBP2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 OR4A8P0C604 315 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 CXCL3P19876 107 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 GPR6P46095 362 aaPredicted RBP2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 PROK1P58294 105 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 ELOCQ15369 112 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 FAM201AQ5SY85 155 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 SCGB1D4Q6XE38 83 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 H1FOOQ8IZA3 346 aaPredicted RBP2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 FTMTQ8N4E7 242 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 OR8S1Q8NH09 359 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 OR5W2Q8NH69 310 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 ZNF418Q8TF45 676 aaPredicted RBP2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 RDH12Q96NR8 316 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 LYSMD1Q96S90 227 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 NDFIP1Q9BT67 221 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 PLEKHA3Q9HB20 300 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 EXOSC3Q9NQT5 275 aaKnown RBP2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 UQCC1Q9NVA1 299 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 VAX2Q9UIW0 290 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 VDAC3Q9Y277 283 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 HS3ST2Q9Y278 367 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 PKIGQ9Y2B9 76 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 YTHDF2Q9Y5A9 579 aaKnown RBP2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 KCNE3Q9Y6H6 103 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 HSPE1-MOB4S4R3N1 261 aa2.78□□□□□ -1.97
ECHDC1-205ENST00000368295 LYSTQ99698 3801 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 MPDZO75970 2070 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 TRAV39A0A0B4J263 110 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 IGHV4-28A0A0C4DH34 117 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 IQCMA0A1B0GVH7 501 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 NPIPB9F8W1W9 429 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 J3QT63 122 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 ATP6V0E1O15342 81 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 TNFSF12O43508 249 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 TRMUO75648 421 aaKnown RBP2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 ARL6IP5O75915 188 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 OR2A4O95047 310 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 HLA-DQB2P05538 268 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 SCTP09683 121 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 OR9G9P0C7N8 305 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 FOLR2P14207 255 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 CXCL2P19875 107 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 AZU1P20160 251 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 RPS3P23396 243 aaKnown RBP eCLIP2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 CTRLP40313 264 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 AMTP48728 403 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 TAF6P49848 677 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 RAB5CP51148 216 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 CDK6Q00534 326 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 GNA12Q03113 381 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 GUCA2BQ16661 112 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 ECSCRQ19T08 205 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 TIMM50Q3ZCQ8 353 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 TTC32Q5I0X7 151 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 COL5A1-AS1Q5SY13 56 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 C6orf52Q5T4I8 152 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 OTUD1Q5VV17 481 aaPredicted RBP2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 ZNF620Q6ZNG0 422 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 GKN2Q86XP6 184 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 TMEM219Q86XT9 240 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 KRTCAP2Q8N6L1 136 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 TCTEX1D1Q8N7M0 179 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 OR5A2Q8NGI9 324 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 OR2G3Q8NGZ4 309 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 OR1L3Q8NH93 324 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 HIST1H2BAQ96A08 127 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 ZNF501Q96CX3 271 aaPredicted RBP2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 STARD4Q96DR4 205 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 TMEM101Q96IK0 257 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 OR2A7Q96R45 310 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 PITPNM3Q9BZ71 974 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 RNASE7Q9H1E1 156 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms