RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 ZNF785A8K8V0 405 aa10.34□□□□□ -0.75
TNFRSF1A-202ENST00000366159 UPK2O00526 184 aa10.34□□□□□ -0.75
TNFRSF1A-202ENST00000366159 NQO2P16083 231 aa10.34□□□□□ -0.75
TNFRSF1A-202ENST00000366159 CATR1Q13166 79 aa10.34□□□□□ -0.75
TNFRSF1A-202ENST00000366159 TMEM69Q5SWH9 247 aa10.34□□□□□ -0.75
TNFRSF1A-202ENST00000366159 LCN12Q6JVE5 192 aa10.34□□□□□ -0.75
TNFRSF1A-202ENST00000366159 GPHB5Q86YW7 130 aa10.34□□□□□ -0.75
TNFRSF1A-202ENST00000366159 CADM3Q8N126 398 aa10.34□□□□□ -0.75
TNFRSF1A-202ENST00000366159 CD300LFQ8TDQ1 290 aa10.34□□□□□ -0.75
TNFRSF1A-202ENST00000366159 MOB3AQ96BX8 217 aa10.34□□□□□ -0.75
TNFRSF1A-202ENST00000366159 FUNDC2Q9BWH2 189 aa10.34□□□□□ -0.75
TNFRSF1A-202ENST00000366159 EHFQ9NZC4 300 aa10.34□□□□□ -0.75
TNFRSF1A-202ENST00000366159 SACSQ9NZJ4 4579 aa10.34□□□□□ -0.75
TNFRSF1A-202ENST00000366159 IGLC7A0M8Q6 106 aa10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 GGCTO75223 188 aaKnown RBP10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 PGLYRP1O75594 196 aaPredicted RBP10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 HLA-AP01891 365 aaKnown RBP10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 EIF4EP06730 217 aaKnown RBP10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 EDN2P20800 178 aa10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 LINC00322Q6ZN03 302 aaPredicted RBP10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 TMEM17Q86X19 198 aa10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 SGPP2Q8IWX5 399 aa10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 GPX8Q8TED1 209 aa10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 CMTM3Q96MX0 182 aa10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 SRSF8Q9BRL6 282 aaKnown RBP10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 ZNF2Q9BSG1 426 aaPredicted RBP10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 ZMAT4Q9H898 229 aa10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 VCX3AQ9NNX9 186 aa10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 IFT46Q9NQC8 304 aa10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 ZC4H2Q9NQZ6 224 aa10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 COMMD9Q9P000 198 aa10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 DPPA5A6NC42 116 aa10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 C2orf70A6NJV1 201 aa10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 S1PR2O95136 353 aa10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 OR2C1O95371 312 aa10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 DHFRP00374 187 aa10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 PMP2P02689 132 aa10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 REG1AP05451 166 aa10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 HIST1H1BP16401 226 aaKnown RBP10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 F2RP25116 425 aa10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 PRSS3P35030 304 aa10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 NCS1P62166 190 aa10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 DEFB114Q30KQ6 69 aa10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 CD300EQ496F6 205 aaPredicted RBP10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 ZNF585BQ52M93 769 aa10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 OR51H1Q8NH63 302 aa10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 MUC7Q8TAX7 377 aa10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 BORCS5Q969J3 196 aa10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 CITED4Q96RK1 184 aa10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 HRASLSQ9HDD0 168 aa10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 TMEM140Q9NV12 185 aa10.33□□□□□ -0.76
TNFRSF1A-202ENST00000366159 MFSD2BA6NFX1 497 aa10.32□□□□□ -0.76
TNFRSF1A-202ENST00000366159 IGHV3-23P01764 117 aa10.32□□□□□ -0.76
TNFRSF1A-202ENST00000366159 APOA1P02647 267 aa10.32□□□□□ -0.76
TNFRSF1A-202ENST00000366159 FOLR2P14207 255 aa10.32□□□□□ -0.76
TNFRSF1A-202ENST00000366159 TAS2R46P59540 309 aa10.32□□□□□ -0.76
TNFRSF1A-202ENST00000366159 HERV-K104P61576 105 aa10.32□□□□□ -0.76
TNFRSF1A-202ENST00000366159 HAGHQ16775 308 aa10.32□□□□□ -0.76
TNFRSF1A-202ENST00000366159 CASC10Q5T4H9 136 aa10.32□□□□□ -0.76
TNFRSF1A-202ENST00000366159 AADACL3Q5VUY0 350 aa10.32□□□□□ -0.76
TNFRSF1A-202ENST00000366159 CLEC19AQ6UXS0 136 aa10.32□□□□□ -0.76
TNFRSF1A-202ENST00000366159 LAX1Q8IWV1 398 aa10.32□□□□□ -0.76
TNFRSF1A-202ENST00000366159 EEF1AKMT3Q96AZ1 226 aa10.32□□□□□ -0.76
TNFRSF1A-202ENST00000366159 FXYD6Q9H0Q3 95 aa10.32□□□□□ -0.76
TNFRSF1A-202ENST00000366159 EDA2RQ9HAV5 297 aa10.32□□□□□ -0.76
TNFRSF1A-202ENST00000366159 S4R3C0 116 aa10.32□□□□□ -0.76
TNFRSF1A-202ENST00000366159 TRBV7-1A0A0A6YYK4 115 aa10.31□□□□□ -0.76
TNFRSF1A-202ENST00000366159 TEX50A0A1B0GTY4 177 aa10.31□□□□□ -0.76
TNFRSF1A-202ENST00000366159 MARCH11A6NNE9 402 aa10.31□□□□□ -0.76
TNFRSF1A-202ENST00000366159 A8MWP6 167 aa10.31□□□□□ -0.76
TNFRSF1A-202ENST00000366159 RLN1P04808 185 aa10.31□□□□□ -0.76
TNFRSF1A-202ENST00000366159 HRH1P35367 487 aa10.31□□□□□ -0.76
TNFRSF1A-202ENST00000366159 ARL3P36405 182 aa10.31□□□□□ -0.76
TNFRSF1A-202ENST00000366159 VBP1P61758 197 aa10.31□□□□□ -0.76
TNFRSF1A-202ENST00000366159 WT1-ASQ06250 92 aa10.31□□□□□ -0.76
TNFRSF1A-202ENST00000366159 OR10W1Q8NGF6 305 aa10.31□□□□□ -0.76
TNFRSF1A-202ENST00000366159 OR5H2Q8NGV7 314 aa10.31□□□□□ -0.76
TNFRSF1A-202ENST00000366159 FCAMRQ8WWV6 532 aa10.31□□□□□ -0.76
TNFRSF1A-202ENST00000366159 DGCR14Q96DF8 476 aaKnown RBP10.31□□□□□ -0.76
TNFRSF1A-202ENST00000366159 CXorf58Q96LI9 332 aa10.31□□□□□ -0.76
TNFRSF1A-202ENST00000366159 COMMD5Q9GZQ3 224 aa10.31□□□□□ -0.76
TNFRSF1A-202ENST00000366159 SCPEP1Q9HB40 452 aa10.31□□□□□ -0.76
TNFRSF1A-202ENST00000366159 NDUFA4L2Q9NRX3 87 aa10.31□□□□□ -0.76
TNFRSF1A-202ENST00000366159 TECRQ9NZ01 308 aaKnown RBP10.31□□□□□ -0.76
TNFRSF1A-202ENST00000366159 COMMD3Q9UBI1 195 aa10.31□□□□□ -0.76
TNFRSF1A-202ENST00000366159 TMEM213A2RRL7 107 aa10.3□□□□□ -0.76
TNFRSF1A-202ENST00000366159 GPR31O00270 319 aa10.3□□□□□ -0.76
TNFRSF1A-202ENST00000366159 CLEC3BP05452 202 aa10.3□□□□□ -0.76
TNFRSF1A-202ENST00000366159 ELK1P19419 428 aa10.3□□□□□ -0.76
TNFRSF1A-202ENST00000366159 CBLN1P23435 193 aa10.3□□□□□ -0.76
TNFRSF1A-202ENST00000366159 PTBP1P26599 531 aaKnown RBP eCLIP10.3□□□□□ -0.761e-7■■■□□ 14.7
TNFRSF1A-202ENST00000366159 HLA-DMAP28067 261 aa10.3□□□□□ -0.76
TNFRSF1A-202ENST00000366159 THOC7Q6I9Y2 204 aaKnown RBP10.3□□□□□ -0.76
TNFRSF1A-202ENST00000366159 GTSCR1Q86UQ5 136 aa10.3□□□□□ -0.76
TNFRSF1A-202ENST00000366159 DMBX1Q8NFW5 382 aa10.3□□□□□ -0.76
TNFRSF1A-202ENST00000366159 OR6F1Q8NGZ6 308 aa10.3□□□□□ -0.76
TNFRSF1A-202ENST00000366159 ZNF502Q8TBZ5 544 aa10.3□□□□□ -0.76
TNFRSF1A-202ENST00000366159 QTRT1Q9BXR0 403 aaKnown RBP10.3□□□□□ -0.76
TNFRSF1A-202ENST00000366159 FAM212BQ9NTI7 297 aaPredicted RBP10.3□□□□□ -0.76
TNFRSF1A-202ENST00000366159 SERPINE2P07093 398 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms