RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 ZNF441Q8N8Z8 693 aa13.5□□□□□ -0.25
CLSTN1-201ENST00000361311 RNASE7Q9H1E1 156 aaKnown RBP13.5□□□□□ -0.25
CLSTN1-201ENST00000361311 CHCHD2Q9Y6H1 151 aaPredicted RBP13.5□□□□□ -0.25
CLSTN1-201ENST00000361311 SFXN3Q9BWM7 321 aa13.49□□□□□ -0.25
CLSTN1-201ENST00000361311 PNRC2Q9NPJ4 139 aaKnown RBP13.49□□□□□ -0.25
CLSTN1-201ENST00000361311 C12orf77C9JDV5 145 aa13.49□□□□□ -0.25
CLSTN1-201ENST00000361311 CLPSP04118 112 aa13.49□□□□□ -0.25
CLSTN1-201ENST00000361311 ZNF83P51522 516 aa13.49□□□□□ -0.25
CLSTN1-201ENST00000361311 TMEM177Q53S58 311 aa13.49□□□□□ -0.25
CLSTN1-201ENST00000361311 DERL1Q9BUN8 251 aa13.49□□□□□ -0.25
CLSTN1-201ENST00000361311 MT-CO3P00414 261 aa13.49□□□□□ -0.25
CLSTN1-201ENST00000361311 SSTR5P35346 364 aa13.49□□□□□ -0.25
CLSTN1-201ENST00000361311 RNF166Q96A37 237 aaPredicted RBP13.49□□□□□ -0.25
CLSTN1-201ENST00000361311 EAF1Q96JC9 268 aaPredicted RBP13.49□□□□□ -0.25
CLSTN1-201ENST00000361311 C1QTNF5Q9BXJ0 243 aa13.49□□□□□ -0.25
CLSTN1-201ENST00000361311 ELOVL5Q9NYP7 299 aa13.49□□□□□ -0.25
CLSTN1-201ENST00000361311 DMRTC2Q8IXT2 367 aaPredicted RBP13.49□□□□□ -0.25
CLSTN1-201ENST00000361311 RND1Q92730 232 aa13.49□□□□□ -0.25
CLSTN1-201ENST00000361311 GNB4Q9HAV0 340 aa13.49□□□□□ -0.25
CLSTN1-201ENST00000361311 TIAF1O95411 115 aa13.48□□□□□ -0.25
CLSTN1-201ENST00000361311 LIPFP07098 398 aa13.48□□□□□ -0.25
CLSTN1-201ENST00000361311 SCGB1C2P0DMR2 95 aa13.48□□□□□ -0.25
CLSTN1-201ENST00000361311 C1orf174Q8IYL3 243 aa13.48□□□□□ -0.25
CLSTN1-201ENST00000361311 DIRC2Q96SL1 478 aa13.48□□□□□ -0.25
CLSTN1-201ENST00000361311 IGHV1-45A0A0A0MS14 117 aa13.48□□□□□ -0.25
CLSTN1-201ENST00000361311 MGST3O14880 152 aa13.48□□□□□ -0.25
CLSTN1-201ENST00000361311 CA7P43166 264 aa13.48□□□□□ -0.25
CLSTN1-201ENST00000361311 MOB3BQ86TA1 216 aa13.48□□□□□ -0.25
CLSTN1-201ENST00000361311 FSCN3Q9NQT6 498 aa13.48□□□□□ -0.25
CLSTN1-201ENST00000361311 A0A1B0GUS0 222 aa13.48□□□□□ -0.25
CLSTN1-201ENST00000361311 RELQ04864 619 aaPredicted RBP13.48□□□□□ -0.25
CLSTN1-201ENST00000361311 MOGAT3Q86VF5 341 aa13.48□□□□□ -0.25
CLSTN1-201ENST00000361311 GNB1LQ9BYB4 327 aa13.48□□□□□ -0.25
CLSTN1-201ENST00000361311 IGHV3OR15-7A0A075B7D8 119 aa13.48□□□□□ -0.25
CLSTN1-201ENST00000361311 TMSB15BA0A087X1C1 80 aa13.48□□□□□ -0.25
CLSTN1-201ENST00000361311 SNAI2O43623 268 aa13.48□□□□□ -0.25
CLSTN1-201ENST00000361311 MPV17P39210 176 aa13.48□□□□□ -0.25
CLSTN1-201ENST00000361311 PRNTQ86SH4 94 aa13.48□□□□□ -0.25
CLSTN1-201ENST00000361311 SLC25A45Q8N413 288 aa13.47□□□□□ -0.25
CLSTN1-201ENST00000361311 OR2M7Q8NG81 312 aa13.47□□□□□ -0.25
CLSTN1-201ENST00000361311 C20orf144Q9BQM9 153 aa13.47□□□□□ -0.25
CLSTN1-201ENST00000361311 AGFG2O95081 481 aa13.47□□□□□ -0.25
CLSTN1-201ENST00000361311 GCSHP23434 173 aa13.47□□□□□ -0.25
CLSTN1-201ENST00000361311 MUC15Q8N387 334 aa13.47□□□□□ -0.25
CLSTN1-201ENST00000361311 WDR83OSQ9Y284 106 aa13.47□□□□□ -0.25
CLSTN1-201ENST00000361311 TMEM50AO95807 157 aa13.47□□□□□ -0.25
CLSTN1-201ENST00000361311 GPR6P46095 362 aaPredicted RBP13.47□□□□□ -0.25
CLSTN1-201ENST00000361311 SELENOTP62341 195 aa13.47□□□□□ -0.25
CLSTN1-201ENST00000361311 HBBP68871 147 aa13.47□□□□□ -0.25
CLSTN1-201ENST00000361311 C1orf210Q8IVY1 113 aa13.47□□□□□ -0.25
CLSTN1-201ENST00000361311 SIGLEC12Q96PQ1 595 aa13.47□□□□□ -0.25
CLSTN1-201ENST00000361311 CRYGSP22914 178 aa13.46□□□□□ -0.25
CLSTN1-201ENST00000361311 ARF6P62330 175 aa13.46□□□□□ -0.25
CLSTN1-201ENST00000361311 ZPBPQ9BS86 351 aa13.46□□□□□ -0.25
CLSTN1-201ENST00000361311 C19orf24Q9BVV8 132 aa13.46□□□□□ -0.25
CLSTN1-201ENST00000361311 DEPPQ9NTK1 212 aa13.46□□□□□ -0.25
CLSTN1-201ENST00000361311 IGFBP2P18065 325 aa13.46□□□□□ -0.25
CLSTN1-201ENST00000361311 PCOLCEQ15113 449 aa13.46□□□□□ -0.25
CLSTN1-201ENST00000361311 TNXAQ16473 311 aa13.46□□□□□ -0.25
CLSTN1-201ENST00000361311 UNQ6494/PRO21346Q6UXR6 183 aa13.46□□□□□ -0.25
CLSTN1-201ENST00000361311 BMPERQ8N8U9 685 aa13.46□□□□□ -0.25
CLSTN1-201ENST00000361311 GUCD1Q96NT3 240 aa13.46□□□□□ -0.25
CLSTN1-201ENST00000361311 HELZP42694 1942 aaKnown RBP13.46□□□□□ -0.25
CLSTN1-201ENST00000361311 A0A0G2JRQ6 117 aa13.46□□□□□ -0.25
CLSTN1-201ENST00000361311 PRR19A6NJB7 356 aa13.46□□□□□ -0.25
CLSTN1-201ENST00000361311 M0R296 226 aa13.46□□□□□ -0.25
CLSTN1-201ENST00000361311 RAMP3O60896 148 aa13.46□□□□□ -0.25
CLSTN1-201ENST00000361311 UCP2P55851 309 aa13.46□□□□□ -0.25
CLSTN1-201ENST00000361311 TMEM116Q8NCL8 245 aa13.46□□□□□ -0.25
CLSTN1-201ENST00000361311 LIME1Q9H400 295 aa13.46□□□□□ -0.25
CLSTN1-201ENST00000361311 HSPB7Q9UBY9 170 aa13.46□□□□□ -0.25
CLSTN1-201ENST00000361311 CLEC3BP05452 202 aa13.46□□□□□ -0.26
CLSTN1-201ENST00000361311 OR10J3Q5JRS4 329 aa13.46□□□□□ -0.26
CLSTN1-201ENST00000361311 PCSK4Q6UW60 755 aa13.46□□□□□ -0.26
CLSTN1-201ENST00000361311 FADS6Q8N9I5 356 aa13.46□□□□□ -0.26
CLSTN1-201ENST00000361311 OR10AG1Q8NH19 301 aa13.46□□□□□ -0.26
CLSTN1-201ENST00000361311 PLPPR1Q8TBJ4 325 aa13.46□□□□□ -0.26
CLSTN1-201ENST00000361311 NEU1Q99519 415 aa13.46□□□□□ -0.26
CLSTN1-201ENST00000361311 IZUMO1RA6ND01 250 aa13.45□□□□□ -0.26
CLSTN1-201ENST00000361311 NDUFB3O43676 98 aa13.45□□□□□ -0.26
CLSTN1-201ENST00000361311 IGKV1-5P01602 117 aa13.45□□□□□ -0.26
CLSTN1-201ENST00000361311 TNFRSF1AP19438 455 aa13.45□□□□□ -0.26
CLSTN1-201ENST00000361311 TNFAIP6P98066 277 aaPredicted RBP13.45□□□□□ -0.26
CLSTN1-201ENST00000361311 UBE2V1Q13404 147 aa13.45□□□□□ -0.26
CLSTN1-201ENST00000361311 TBR1Q16650 682 aa13.45□□□□□ -0.26
CLSTN1-201ENST00000361311 MIR17HGQ75NE6 70 aa13.45□□□□□ -0.26
CLSTN1-201ENST00000361311 PMCHL2Q9BQD1 86 aa13.45□□□□□ -0.26
CLSTN1-201ENST00000361311 NGBQ9NPG2 151 aa13.45□□□□□ -0.26
CLSTN1-201ENST00000361311 PLA2G2EQ9NZK7 142 aa13.45□□□□□ -0.26
CLSTN1-201ENST00000361311 A0A1B0GWJ7 208 aa13.45□□□□□ -0.26
CLSTN1-201ENST00000361311 HYPMO75409 117 aa13.45□□□□□ -0.26
CLSTN1-201ENST00000361311 ZNF524Q96C55 264 aa13.45□□□□□ -0.26
CLSTN1-201ENST00000361311 AP5S1Q9NUS5 200 aa13.45□□□□□ -0.26
CLSTN1-201ENST00000361311 INO80CQ6PI98 192 aaPredicted RBP13.45□□□□□ -0.26
CLSTN1-201ENST00000361311 CT55Q8WUE5 264 aa13.45□□□□□ -0.26
CLSTN1-201ENST00000361311 GRAMD2BQ96HH9 432 aa13.45□□□□□ -0.26
CLSTN1-201ENST00000361311 DENND4AQ7Z401 1863 aa13.45□□□□□ -0.26
CLSTN1-201ENST00000361311 TRAV24A0A0B4J272 114 aa13.44□□□□□ -0.26
CLSTN1-201ENST00000361311 SLC35E4Q6ICL7 350 aa13.44□□□□□ -0.26
CLSTN1-201ENST00000361311 TMEM14EPQ6UXP3 125 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms