RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 OR2C1O95371 312 aa15.18■□□□□ 0.02
HOXA9-201ENST00000343483 HRASP01112 189 aa15.18■□□□□ 0.02
HOXA9-201ENST00000343483 IGHV2-70P01814 119 aa15.18■□□□□ 0.02
HOXA9-201ENST00000343483 SOD3P08294 240 aa15.18■□□□□ 0.02
HOXA9-201ENST00000343483 REG1BP48304 166 aa15.18■□□□□ 0.02
HOXA9-201ENST00000343483 DLX6P56179 175 aa15.18■□□□□ 0.02
HOXA9-201ENST00000343483 IQCF2Q8IXL9 164 aa15.18■□□□□ 0.02
HOXA9-201ENST00000343483 OR13D1Q8NGV5 346 aa15.18■□□□□ 0.02
HOXA9-201ENST00000343483 OR52E5Q8NH55 327 aa15.18■□□□□ 0.02
HOXA9-201ENST00000343483 TVP23CQ96ET8 276 aa15.18■□□□□ 0.02
HOXA9-201ENST00000343483 HEYLQ9NQ87 328 aaPredicted RBP15.18■□□□□ 0.02
HOXA9-201ENST00000343483 DOCK11Q5JSL3 2073 aa15.17■□□□□ 0.02
HOXA9-201ENST00000343483 C15orf61A6NNL5 157 aa15.17■□□□□ 0.02
HOXA9-201ENST00000343483 IGKV1D-33P01593 117 aa15.17■□□□□ 0.02
HOXA9-201ENST00000343483 IGKV1-33P01594 117 aa15.17■□□□□ 0.02
HOXA9-201ENST00000343483 TAGLN2P37802 199 aaKnown RBP15.17■□□□□ 0.02
HOXA9-201ENST00000343483 RAB11AP62491 216 aa15.17■□□□□ 0.02
HOXA9-201ENST00000343483 C4orf17Q53FE4 359 aa15.17■□□□□ 0.02
HOXA9-201ENST00000343483 ACSM6Q6P461 480 aa15.17■□□□□ 0.02
HOXA9-201ENST00000343483 SLC39A9Q9NUM3 307 aa15.17■□□□□ 0.02
HOXA9-201ENST00000343483 KLF2Q9Y5W3 355 aaPredicted RBP15.17■□□□□ 0.02
HOXA9-201ENST00000343483 ABCA4P78363 2273 aa15.17■□□□□ 0.02
HOXA9-201ENST00000343483 TRBV23-1A0A0A0MS06 115 aa15.16■□□□□ 0.02
HOXA9-201ENST00000343483 hCG_1809904A0A1W2PP81 198 aa15.16■□□□□ 0.02
HOXA9-201ENST00000343483 A0A1W2PR64 198 aa15.16■□□□□ 0.02
HOXA9-201ENST00000343483 A0A1W2PRV1 198 aa15.16■□□□□ 0.02
HOXA9-201ENST00000343483 C15orf62A8K5M9 175 aa15.16■□□□□ 0.02
HOXA9-201ENST00000343483 J3QR06 171 aa15.16■□□□□ 0.02
HOXA9-201ENST00000343483 EIF3GO75821 320 aaKnown RBP eCLIP15.16■□□□□ 0.02
HOXA9-201ENST00000343483 IFNA10P01566 189 aa15.16■□□□□ 0.02
HOXA9-201ENST00000343483 RAB5AP20339 215 aa15.16■□□□□ 0.02
HOXA9-201ENST00000343483 HOXA1P49639 335 aaPredicted RBP15.16■□□□□ 0.02
HOXA9-201ENST00000343483 GNB2P62879 340 aa15.16■□□□□ 0.02
HOXA9-201ENST00000343483 DLK1P80370 383 aa15.16■□□□□ 0.02
HOXA9-201ENST00000343483 SRSF1Q07955 248 aaKnown RBP eCLIP15.16■□□□□ 0.02
HOXA9-201ENST00000343483 RPP25LQ8N5L8 163 aaKnown RBP15.16■□□□□ 0.02
HOXA9-201ENST00000343483 IFNA1P01562 189 aa15.16■□□□□ 0.02
HOXA9-201ENST00000343483 IGHV1-8P0DP01 117 aa15.16■□□□□ 0.02
HOXA9-201ENST00000343483 AKR1D1P51857 326 aa15.16■□□□□ 0.02
HOXA9-201ENST00000343483 VWC2Q2TAL6 325 aa15.16■□□□□ 0.02
HOXA9-201ENST00000343483 ITLN2Q8WWU7 325 aaPredicted RBP15.16■□□□□ 0.02
HOXA9-201ENST00000343483 LHX4Q969G2 390 aa15.16■□□□□ 0.02
HOXA9-201ENST00000343483 TCF19Q9Y242 345 aa15.16■□□□□ 0.02
HOXA9-201ENST00000343483 PDLIM3Q53GG5 364 aaPredicted RBP15.15■□□□□ 0.02
HOXA9-201ENST00000343483 SLC35E3Q7Z769 313 aa15.15■□□□□ 0.02
HOXA9-201ENST00000343483 LY86O95711 162 aa15.15■□□□□ 0.02
HOXA9-201ENST00000343483 MBP02144 154 aa15.15■□□□□ 0.02
HOXA9-201ENST00000343483 APOA2P02652 100 aa15.15■□□□□ 0.02
HOXA9-201ENST00000343483 RPL35P42766 123 aaKnown RBP15.15■□□□□ 0.02
HOXA9-201ENST00000343483 RPP30P78346 268 aaKnown RBP15.15■□□□□ 0.02
HOXA9-201ENST00000343483 FFAR4Q5NUL3 377 aa15.15■□□□□ 0.02
HOXA9-201ENST00000343483 C11orf71Q6IPW1 123 aa15.15■□□□□ 0.02
HOXA9-201ENST00000343483 ZNF841Q6ZN19 808 aa15.15■□□□□ 0.02
HOXA9-201ENST00000343483 ABHD12Q8N2K0 398 aa15.15■□□□□ 0.02
HOXA9-201ENST00000343483 ZNF709Q8N972 641 aa15.15■□□□□ 0.02
HOXA9-201ENST00000343483 NPCDR1Q9BY65 106 aa15.15■□□□□ 0.02
HOXA9-201ENST00000343483 TMEM14BQ9NUH8 114 aa15.15■□□□□ 0.02
HOXA9-201ENST00000343483 VAX2Q9UIW0 290 aa15.15■□□□□ 0.02
HOXA9-201ENST00000343483 FOXA2Q9Y261 457 aaPredicted RBP15.15■□□□□ 0.02
HOXA9-201ENST00000343483 BAHCC1Q9P281 2608 aa15.14■□□□□ 0.01
HOXA9-201ENST00000343483 SRRM4A7MD48 611 aaKnown RBP15.14■□□□□ 0.01
HOXA9-201ENST00000343483 ZNF727A8MUV8 499 aa15.14■□□□□ 0.01
HOXA9-201ENST00000343483 FSTL3O95633 263 aa15.14■□□□□ 0.01
HOXA9-201ENST00000343483 VDAC2P45880 294 aaPredicted RBP15.14■□□□□ 0.01
HOXA9-201ENST00000343483 DIAPH2-AS1Q14236 149 aa15.14■□□□□ 0.01
HOXA9-201ENST00000343483 POU2AF1Q16633 256 aa15.14■□□□□ 0.01
HOXA9-201ENST00000343483 FAM90A2PQ658T7 463 aa15.14■□□□□ 0.01
HOXA9-201ENST00000343483 LINC00518Q8N0U6 118 aa15.14■□□□□ 0.01
HOXA9-201ENST00000343483 OR10G9Q8NGN4 311 aa15.14■□□□□ 0.01
HOXA9-201ENST00000343483 OR10G7Q8NGN6 311 aa15.14■□□□□ 0.01
HOXA9-201ENST00000343483 OR9G1Q8NH87 305 aa15.14■□□□□ 0.01
HOXA9-201ENST00000343483 SLC25A22Q9H936 323 aa15.14■□□□□ 0.01
HOXA9-201ENST00000343483 LRRK2Q5S007 2527 aa15.14■□□□□ 0.01
HOXA9-201ENST00000343483 HCFC1P51610 2035 aa15.13■□□□□ 0.01
HOXA9-201ENST00000343483 HRNRQ86YZ3 2850 aaPredicted RBP15.13■□□□□ 0.01
HOXA9-201ENST00000343483 A0A087WWC5 75 aa15.13■□□□□ 0.01
HOXA9-201ENST00000343483 H0YJW9 148 aa15.13■□□□□ 0.01
HOXA9-201ENST00000343483 RNF224P0DH78 156 aa15.13■□□□□ 0.01
HOXA9-201ENST00000343483 AGAP20933 346 aa15.13■□□□□ 0.01
HOXA9-201ENST00000343483 C11orf42Q8N5U0 333 aa15.13■□□□□ 0.01
HOXA9-201ENST00000343483 LINC00311Q8N616 119 aa15.13■□□□□ 0.01
HOXA9-201ENST00000343483 C8orf31Q8N9H6 132 aa15.13■□□□□ 0.01
HOXA9-201ENST00000343483 P2RX4Q99571 388 aa15.13■□□□□ 0.01
HOXA9-201ENST00000343483 HINT2Q9BX68 163 aa15.13■□□□□ 0.01
HOXA9-201ENST00000343483 TMEM133Q9H2Q1 129 aa15.13■□□□□ 0.01
HOXA9-201ENST00000343483 A0A087X0M5 115 aa15.13■□□□□ 0.01
HOXA9-201ENST00000343483 CTXND1A0A1B0GTU2 59 aa15.13■□□□□ 0.01
HOXA9-201ENST00000343483 A0A1B0GX30 115 aa15.13■□□□□ 0.01
HOXA9-201ENST00000343483 HMGB3O15347 200 aaKnown RBP15.13■□□□□ 0.01
HOXA9-201ENST00000343483 MYOD1P15172 320 aa15.13■□□□□ 0.01
HOXA9-201ENST00000343483 TMEM186Q96B77 213 aa15.13■□□□□ 0.01
HOXA9-201ENST00000343483 YPEL4Q96NS1 127 aa15.13■□□□□ 0.01
HOXA9-201ENST00000343483 OR51B2Q9Y5P1 312 aa15.13■□□□□ 0.01
HOXA9-201ENST00000343483 DCHS2Q6V1P9 2916 aa15.13■□□□□ 0.01
HOXA9-201ENST00000343483 C17orf112F2Z3M2 114 aa15.12■□□□□ 0.01
HOXA9-201ENST00000343483 RRHO14718 337 aa15.12■□□□□ 0.01
HOXA9-201ENST00000343483 DLX1P56177 255 aa15.12■□□□□ 0.01
HOXA9-201ENST00000343483 HSPE1P61604 102 aaKnown RBP15.12■□□□□ 0.01
HOXA9-201ENST00000343483 RBMS3Q6XE24 437 aaKnown RBP15.12■□□□□ 0.01
HOXA9-201ENST00000343483 OR8B3Q8NGG8 313 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms