RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 SRSF12Q8WXF0 261 aaKnown RBP9.37□□□□□ -0.91
SPTLC1-202ENST00000337841 FAM103A1Q9BTL3 118 aaKnown RBP9.37□□□□□ -0.91
SPTLC1-202ENST00000337841 FBN1P35555 2871 aaKnown RBP9.36□□□□□ -0.91
SPTLC1-202ENST00000337841 TRAV3A0A0B4J244 114 aa9.36□□□□□ -0.91
SPTLC1-202ENST00000337841 G3V318 75 aa9.36□□□□□ -0.91
SPTLC1-202ENST00000337841 FBXO24O75426 580 aa9.36□□□□□ -0.91
SPTLC1-202ENST00000337841 RBMXL2O75526 392 aaKnown RBP9.36□□□□□ -0.91
SPTLC1-202ENST00000337841 ELANEP08246 267 aa9.36□□□□□ -0.91
SPTLC1-202ENST00000337841 ANXA7P20073 488 aaKnown RBP9.36□□□□□ -0.91
SPTLC1-202ENST00000337841 CRIP2P52943 208 aaPredicted RBP9.36□□□□□ -0.91
SPTLC1-202ENST00000337841 NDPQ00604 133 aa9.36□□□□□ -0.91
SPTLC1-202ENST00000337841 PPP1R1AQ13522 171 aa9.36□□□□□ -0.91
SPTLC1-202ENST00000337841 ECSCRQ19T08 205 aa9.36□□□□□ -0.91
SPTLC1-202ENST00000337841 TMEM65Q6PI78 240 aa9.36□□□□□ -0.91
SPTLC1-202ENST00000337841 DUSP18Q8NEJ0 188 aa9.36□□□□□ -0.91
SPTLC1-202ENST00000337841 OR1L8Q8NGR8 309 aa9.36□□□□□ -0.91
SPTLC1-202ENST00000337841 CASTOR1Q8WTX7 329 aa9.36□□□□□ -0.91
SPTLC1-202ENST00000337841 FYTTD1Q96QD9 318 aaKnown RBP9.36□□□□□ -0.91
SPTLC1-202ENST00000337841 C20orf85Q9H1P6 137 aa9.36□□□□□ -0.91
SPTLC1-202ENST00000337841 FOXA2Q9Y261 457 aaPredicted RBP9.36□□□□□ -0.91
SPTLC1-202ENST00000337841 OR51B2Q9Y5P1 312 aa9.36□□□□□ -0.91
SPTLC1-202ENST00000337841 TRAV6A0A075B6T7 132 aa9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 TEX50A0A1B0GTY4 177 aa9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 TCRBV4S1A1TA0A5B7 111 aa9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 C9orf170A2RU37 121 aa9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 IGKV1-5P01602 117 aa9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 IGHG4P01861 327 aa9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 OPN1MWP04001 364 aa9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 OR4E1P0C645 316 aa9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 OR9G9P0C7N8 305 aa9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 TRAPPC2P0DI81 140 aa9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 TRAPPC2BP0DI82 140 aa9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 OPN1MW2P0DN77 364 aa9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 OPN1MW3P0DN78 364 aa9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 PPIFP30405 207 aaKnown RBP9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 KRTAP10-3P60369 221 aa9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 FOXE3Q13461 319 aa9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 CXorf66Q5JRM2 361 aaPredicted RBP9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 PLET1Q6UQ28 207 aa9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 LYG2Q86SG7 212 aa9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 C11orf44Q8N8P7 122 aa9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 MINDY2Q8NBR6 621 aa9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 OR5T1Q8NG75 326 aa9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 OR5M8Q8NGP6 311 aa9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 COQ8AQ8NI60 647 aa9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 WIPF2Q8TF74 440 aaPredicted RBP9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 LSM10Q969L4 123 aaKnown RBP9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 CITED1Q99966 193 aa9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 PALMDQ9NP74 551 aa9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 ZNF355PQ9NSJ1 428 aa9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 ZFP57Q9NU63 452 aa9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 NUDT15Q9NV35 164 aa9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 CACFD1Q9UGQ2 172 aa9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 NSG2Q9Y328 171 aa9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 FBXO7Q9Y3I1 522 aa9.35□□□□□ -0.91
SPTLC1-202ENST00000337841 COL6A5A8TX70 2615 aa9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 A0A0B4J2A0 478 aa9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 A0A1W2PN81 502 aa9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 DUXBA0A1W2PPF3 345 aa9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 DUS4LO95620 317 aaKnown RBP9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 HLA-AP01891 365 aaKnown RBP9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 PF4V1P10720 104 aa9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 CD28P10747 220 aa9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 CHRNA7P36544 502 aa9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 OR2B8PP59922 312 aa9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 HSPE1P61604 102 aaKnown RBP9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 SSBP2P81877 361 aaPredicted RBP9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 CD83Q01151 205 aa9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 CFHR3Q02985 330 aa9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 SRSF4Q08170 494 aaKnown RBP9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 C10orf55Q5SWW7 151 aa9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 THOC7Q6I9Y2 204 aaKnown RBP9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 HSD17B13Q7Z5P4 300 aaPredicted RBP9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 NRARPQ7Z6K4 114 aa9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 MRPL41Q8IXM3 137 aaKnown RBP9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 LRTM2Q8N967 370 aa9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 OR5B3Q8NH48 314 aa9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 LHFPL5Q8TAF8 219 aa9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 SRSF8Q9BRL6 282 aaKnown RBP9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 PDCD10Q9BUL8 212 aa9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 HINT2Q9BX68 163 aa9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 QTRT1Q9BXR0 403 aaKnown RBP9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 TMEM14BQ9NUH8 114 aa9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 SHPKQ9UHJ6 478 aa9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 ZNF257Q9Y2Q1 563 aa9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 CUBNO60494 3623 aa9.34□□□□□ -0.91
SPTLC1-202ENST00000337841 A0A0B4J293 547 aa9.33□□□□□ -0.92
SPTLC1-202ENST00000337841 HMX3A6NHT5 357 aa9.33□□□□□ -0.92
SPTLC1-202ENST00000337841 C15orf61A6NNL5 157 aa9.33□□□□□ -0.92
SPTLC1-202ENST00000337841 IGLV1-40P01703 118 aa9.33□□□□□ -0.92
SPTLC1-202ENST00000337841 P0C879 139 aa9.33□□□□□ -0.92
SPTLC1-202ENST00000337841 MYOD1P15172 320 aa9.33□□□□□ -0.92
SPTLC1-202ENST00000337841 DHRS2Q13268 280 aa9.33□□□□□ -0.92
SPTLC1-202ENST00000337841 DCTN2Q13561 401 aaKnown RBP9.33□□□□□ -0.92
SPTLC1-202ENST00000337841 ANKRD55Q3KP44 614 aa9.33□□□□□ -0.92
SPTLC1-202ENST00000337841 C19orf54Q5BKX5 351 aa9.33□□□□□ -0.92
SPTLC1-202ENST00000337841 C10orf99Q6UWK7 81 aa9.33□□□□□ -0.92
SPTLC1-202ENST00000337841 LYZL2Q7Z4W2 148 aa9.33□□□□□ -0.92
SPTLC1-202ENST00000337841 ZNF429Q86V71 674 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms